Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12p24
(416 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 25 0.34
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 25 0.45
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 25 0.45
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 25 0.45
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 25 0.45
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 25 0.45
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 25 0.45
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 25 0.45
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 25 0.45
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 0.45
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 24 0.79
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 24 0.79
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 24 0.79
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 24 0.79
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 24 0.79
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 0.79
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 0.79
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 0.79
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 24 0.79
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 0.79
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 1.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 1.0
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 1.8
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 2.4
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 2.4
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 2.4
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 2.4
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 3.2
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 3.2
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 3.2
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 3.2
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 3.2
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 3.2
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 4.2
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 4.2
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 4.2
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 4.2
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 4.2
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 4.2
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 4.2
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 4.2
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 4.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 4.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 4.2
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 5.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 7.4
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 25.0 bits (52), Expect = 0.34
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 169 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
NYS +N YNNN N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNNY----------NNYNKKLYYNINYIEQI 118
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 0.45
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 169 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
Score = 20.2 bits (40), Expect = 9.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 172 DNYSLHNFYNNNRK 131
+NY+ +N YNN +K
Sbjct: 95 NNYNNNNNYNNYKK 108
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.6 bits (51), Expect = 0.45
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 169 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
Score = 20.2 bits (40), Expect = 9.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 172 DNYSLHNFYNNNRK 131
+NY+ +N YNN +K
Sbjct: 95 NNYNNNNNYNNYKK 108
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 0.45
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 169 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
Score = 20.2 bits (40), Expect = 9.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 172 DNYSLHNFYNNNRK 131
+NY+ +N YNN +K
Sbjct: 95 NNYNNNNNYNNYKK 108
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 0.45
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 169 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
Score = 20.2 bits (40), Expect = 9.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 172 DNYSLHNFYNNNRK 131
+NY+ +N YNN +K
Sbjct: 95 NNYNNNNNYNNYKK 108
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 0.45
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 169 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
Score = 20.2 bits (40), Expect = 9.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 172 DNYSLHNFYNNNRK 131
+NY+ +N YNN +K
Sbjct: 95 NNYNNNNNYNNYKK 108
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 0.45
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 169 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
Score = 20.2 bits (40), Expect = 9.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 172 DNYSLHNFYNNNRK 131
+NY+ +N YNN +K
Sbjct: 95 NNYNNNNNYNNYKK 108
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 0.45
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 169 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
Score = 20.2 bits (40), Expect = 9.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 172 DNYSLHNFYNNNRK 131
+NY+ +N YNN +K
Sbjct: 95 NNYNNNNNYNNYKK 108
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 0.45
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 169 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
Score = 20.2 bits (40), Expect = 9.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 172 DNYSLHNFYNNNRK 131
+NY+ +N YNN +K
Sbjct: 95 NNYNNNNNYNNYKK 108
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.6 bits (51), Expect = 0.45
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
+NY+ +N YNNN ++ N KK +Y NI Y+ ++
Sbjct: 332 NNYNNYNNYNNN---------YNNNYKK-LYYNINYIEQI 361
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 0.79
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ +N YNNN KPL
Sbjct: 87 NNYNYNN-YNNNYKPL 101
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 0.79
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ +N YNNN KPL
Sbjct: 87 NNYNYNN-YNNNYKPL 101
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 0.79
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ +N YNNN KPL
Sbjct: 87 NNYNYNN-YNNNYKPL 101
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 0.79
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ +N YNNN KPL
Sbjct: 87 NNYNYNN-YNNNYKPL 101
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.8 bits (49), Expect = 0.79
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ +N YNNN KPL
Sbjct: 320 NNYNYNN-YNNNYKPL 334
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 0.79
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ +N YNNN KPL
Sbjct: 320 NNYNYNN-YNNNYKPL 334
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 0.79
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ +N YNNN KPL
Sbjct: 320 NNYNYNN-YNNNYKPL 334
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 0.79
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ +N YNNN KPL
Sbjct: 320 NNYNYNN-YNNNYKPL 334
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 0.79
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ +N YNNN KPL
Sbjct: 320 NNYNYNN-YNNNYKPL 334
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.8 bits (49), Expect = 0.79
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ +N YNNN KPL
Sbjct: 309 NNYNYNN-YNNNYKPL 323
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.4 bits (48), Expect = 1.0
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 178 TMD-NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKLMCKENMP 32
T+D Y L N KP + D + KS E+ITY L + N+P
Sbjct: 75 TLDLEYELVENLQANEKPWSTLPIED--LTKSDNEDITYPTVLEVQLNLP 122
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.4 bits (48), Expect = 1.0
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 178 TMD-NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKLMCKENMP 32
T+D Y L N KP + D + KS E+ITY L + N+P
Sbjct: 113 TLDLEYELVENLQANEKPWSTLPIED--LTKSDNEDITYPTVLEVQLNLP 160
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 1.8
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -2
Query: 190 CLCCTMDNYSLHNFYNNNRKPLKPTTLH 107
CL + Y L + Y +K + P +LH
Sbjct: 277 CLSTRLFYYQLTDLYKKIKKAVPPLSLH 304
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLK 122
+NY+ +N+ NNN K L+
Sbjct: 95 NNYNNNNYNNNNYKKLQ 111
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLK 122
+NY+ +N+ NNN K L+
Sbjct: 95 NNYNNNNYNNNNYKKLQ 111
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLK 122
+NY+ +N+ NNN K L+
Sbjct: 95 NNYNNNNYNNNNYKKLQ 111
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLK 122
+NY+ +N+ NNN K L+
Sbjct: 95 NNYNNNNYNNNNYKKLQ 111
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ N+ NNN K L
Sbjct: 87 NNYNYSNYNNNNYKQL 102
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ N+ NNN K L
Sbjct: 87 NNYNYSNYNNNNYKQL 102
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ N+ NNN K L
Sbjct: 87 NNYNYSNYNNNNYKQL 102
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ N+ NNN K L
Sbjct: 87 NNYNYSNYNNNNYKQL 102
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ N+ NNN K L
Sbjct: 87 NNYNYSNYNNNNYKQL 102
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPL 125
+NY+ N+ NNN K L
Sbjct: 87 NNYNYSNYNNNNYKQL 102
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
+NY+ +N YNN K H+ N +Y NI Y+ ++
Sbjct: 90 NNYNYNNNYNNYNK-------HNYN---KLYYNINYIEQI 119
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
+NY+ +N YNN K H+ N +Y NI Y+ ++
Sbjct: 90 NNYNYNNNYNNYNK-------HNYN---KLYYNINYIEQI 119
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
+NY+ +N YNN K H+ N +Y NI Y+ ++
Sbjct: 90 NNYNYNNNYNNYNK-------HNYN---KLYYNINYIEQI 119
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
+NY+ +N YNN K H+ N +Y NI Y+ ++
Sbjct: 90 NNYNYNNNYNNYNK-------HNYN---KLYYNINYIEQI 119
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
+NY+ +N YNN K H+ N +Y NI Y+ ++
Sbjct: 90 NNYNYNNNYNNYNK-------HNYN---KLYYNINYIEQI 119
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
+NY+ +N YNN K H+ N +Y NI Y+ ++
Sbjct: 90 NNYNYNNNYNNYNK-------HNYN---KLYYNINYIEQI 119
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
+NY+ +N YNN K H+ N +Y NI Y+ ++
Sbjct: 90 NNYNYNNNYNNYNK-------HNYN---KLYYNINYIEQI 119
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
+NY+ +N YNN K H+ N +Y NI Y+ ++
Sbjct: 90 NNYNYNNNYNNYNK-------HNYN---KLYYNINYIEQI 119
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
+NY+ +N YNN K H+ N +Y NI Y+ ++
Sbjct: 90 NNYNYNNNYNNYNK-------HNYN---KLYYNINYIEQI 119
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 4.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
+NY+ +N YNN K H+ N +Y NI Y+ ++
Sbjct: 323 NNYNYNNNYNNYNK-------HNYN---KLYYNINYIEQI 352
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 4.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 172 DNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 53
+NY+ +N YNN K H+ N +Y NI Y+ ++
Sbjct: 323 NNYNYNNNYNNYNK-------HNYN---KLYYNINYIEQI 352
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.0 bits (42), Expect = 5.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -2
Query: 409 NALCLNMFIITYKNDIIFRLCFTSRII 329
N + N+ I Y+N +C +RII
Sbjct: 324 NPILYNLMSIKYRNAFKQTICCKTRII 350
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.6 bits (41), Expect = 7.4
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2
Query: 169 NYSLHNFYNNN 137
NY+ +N YNNN
Sbjct: 326 NYNNYNNYNNN 336
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,302
Number of Sequences: 438
Number of extensions: 2330
Number of successful extensions: 54
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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