Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12p22
(801 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D78151-1|BAA11226.1| 908|Homo sapiens human 26S proteasome subu... 350 3e-96
BC002997-1|AAH02997.1| 908|Homo sapiens proteasome (prosome, ma... 350 3e-96
BC002368-1|AAH02368.1| 908|Homo sapiens proteasome (prosome, ma... 350 3e-96
AB209843-1|BAD93080.1| 913|Homo sapiens proteasome 26S non-ATPa... 350 3e-96
BT009736-1|AAP88738.1| 908|Homo sapiens proteasome (prosome, ma... 347 3e-95
BC007897-1|AAH07897.1| 908|Homo sapiens proteasome (prosome, ma... 347 3e-95
X86446-1|CAA60167.1| 900|Homo sapiens 55.11 protein protein. 343 3e-94
U12596-1|AAA87705.1| 853|Homo sapiens tumor necrosis factor typ... 338 1e-92
U18247-1|AAA57339.1| 591|Homo sapiens p67 protein. 316 6e-86
AK125483-1|BAC86177.1| 125|Homo sapiens protein ( Homo sapiens ... 31 4.8
BC016440-1|AAH16440.1| 408|Homo sapiens NARF protein protein. 30 8.5
BC000438-1|AAH00438.1| 502|Homo sapiens NARF protein protein. 30 8.5
AK000929-1|BAA91432.1| 456|Homo sapiens protein ( Homo sapiens ... 30 8.5
AF128406-1|AAD51446.1| 456|Homo sapiens nuclear prelamin A reco... 30 8.5
>D78151-1|BAA11226.1| 908|Homo sapiens human 26S proteasome subunit
p97 protein.
Length = 908
Score = 350 bits (861), Expect = 3e-96
Identities = 164/248 (66%), Positives = 202/248 (81%)
Frame = -3
Query: 799 GVAVIALAEETGAEMCTRIFGQLGRYGEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSH 620
G+A+IA+ EE GAEM R FG L RYGEP +RRAVPLA+AL SVSNP+L+++D L+K+SH
Sbjct: 656 GIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSH 715
Query: 619 DSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXLYHGKSPVHLFMVRLAQGLCHAGKGT 440
D+D +V+YN+IFAMG+VG+GTNN YH K P +LFMVRLAQGL H GKGT
Sbjct: 716 DADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGT 775
Query: 439 VTLCPAHADRRLLNQPALAGLLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDE 260
+TLCP H+DR+L++Q A+AGLL VL +FLD + IILGKSHY+LY L AMQPR LVT DE
Sbjct: 776 LTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDE 835
Query: 259 NLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHTHTTPVLLSFGERAELATDEYIPLSPIME 80
L+PL VSVRVGQAVDV+G+AG PKTI G THTTPVLL+ GERAELAT+E++P++PI+E
Sbjct: 836 ELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILE 895
Query: 79 GFVILKKN 56
GFVIL+KN
Sbjct: 896 GFVILRKN 903
>BC002997-1|AAH02997.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 350 bits (861), Expect = 3e-96
Identities = 164/248 (66%), Positives = 202/248 (81%)
Frame = -3
Query: 799 GVAVIALAEETGAEMCTRIFGQLGRYGEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSH 620
G+A+IA+ EE GAEM R FG L RYGEP +RRAVPLA+AL SVSNP+L+++D L+K+SH
Sbjct: 656 GIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSH 715
Query: 619 DSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXLYHGKSPVHLFMVRLAQGLCHAGKGT 440
D+D +V+YN+IFAMG+VG+GTNN YH K P +LFMVRLAQGL H GKGT
Sbjct: 716 DADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGT 775
Query: 439 VTLCPAHADRRLLNQPALAGLLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDE 260
+TLCP H+DR+L++Q A+AGLL VL +FLD + IILGKSHY+LY L AMQPR LVT DE
Sbjct: 776 LTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDE 835
Query: 259 NLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHTHTTPVLLSFGERAELATDEYIPLSPIME 80
L+PL VSVRVGQAVDV+G+AG PKTI G THTTPVLL+ GERAELAT+E++P++PI+E
Sbjct: 836 ELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILE 895
Query: 79 GFVILKKN 56
GFVIL+KN
Sbjct: 896 GFVILRKN 903
>BC002368-1|AAH02368.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 350 bits (861), Expect = 3e-96
Identities = 164/248 (66%), Positives = 202/248 (81%)
Frame = -3
Query: 799 GVAVIALAEETGAEMCTRIFGQLGRYGEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSH 620
G+A+IA+ EE GAEM R FG L RYGEP +RRAVPLA+AL SVSNP+L+++D L+K+SH
Sbjct: 656 GIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSH 715
Query: 619 DSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXLYHGKSPVHLFMVRLAQGLCHAGKGT 440
D+D +V+YN+IFAMG+VG+GTNN YH K P +LFMVRLAQGL H GKGT
Sbjct: 716 DADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGT 775
Query: 439 VTLCPAHADRRLLNQPALAGLLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDE 260
+TLCP H+DR+L++Q A+AGLL VL +FLD + IILGKSHY+LY L AMQPR LVT DE
Sbjct: 776 LTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDE 835
Query: 259 NLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHTHTTPVLLSFGERAELATDEYIPLSPIME 80
L+PL VSVRVGQAVDV+G+AG PKTI G THTTPVLL+ GERAELAT+E++P++PI+E
Sbjct: 836 ELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILE 895
Query: 79 GFVILKKN 56
GFVIL+KN
Sbjct: 896 GFVILRKN 903
>AB209843-1|BAD93080.1| 913|Homo sapiens proteasome 26S non-ATPase
subunit 2 variant protein.
Length = 913
Score = 350 bits (861), Expect = 3e-96
Identities = 164/248 (66%), Positives = 202/248 (81%)
Frame = -3
Query: 799 GVAVIALAEETGAEMCTRIFGQLGRYGEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSH 620
G+A+IA+ EE GAEM R FG L RYGEP +RRAVPLA+AL SVSNP+L+++D L+K+SH
Sbjct: 661 GIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSH 720
Query: 619 DSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXLYHGKSPVHLFMVRLAQGLCHAGKGT 440
D+D +V+YN+IFAMG+VG+GTNN YH K P +LFMVRLAQGL H GKGT
Sbjct: 721 DADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGT 780
Query: 439 VTLCPAHADRRLLNQPALAGLLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDE 260
+TLCP H+DR+L++Q A+AGLL VL +FLD + IILGKSHY+LY L AMQPR LVT DE
Sbjct: 781 LTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDE 840
Query: 259 NLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHTHTTPVLLSFGERAELATDEYIPLSPIME 80
L+PL VSVRVGQAVDV+G+AG PKTI G THTTPVLL+ GERAELAT+E++P++PI+E
Sbjct: 841 ELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILE 900
Query: 79 GFVILKKN 56
GFVIL+KN
Sbjct: 901 GFVILRKN 908
>BT009736-1|AAP88738.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 347 bits (853), Expect = 3e-95
Identities = 163/248 (65%), Positives = 201/248 (81%)
Frame = -3
Query: 799 GVAVIALAEETGAEMCTRIFGQLGRYGEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSH 620
G+A+IA+ EE GAEM R FG L RYGEP +RRAVPLA+AL SVSNP+L+++D L+K+SH
Sbjct: 656 GIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSH 715
Query: 619 DSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXLYHGKSPVHLFMVRLAQGLCHAGKGT 440
D+D +V+Y +IFAMG+VG+GTNN YH K P +LFMVRLAQGL H GKGT
Sbjct: 716 DADPEVSYYSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGT 775
Query: 439 VTLCPAHADRRLLNQPALAGLLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDE 260
+TLCP H+DR+L++Q A+AGLL VL +FLD + IILGKSHY+LY L AMQPR LVT DE
Sbjct: 776 LTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDE 835
Query: 259 NLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHTHTTPVLLSFGERAELATDEYIPLSPIME 80
L+PL VSVRVGQAVDV+G+AG PKTI G THTTPVLL+ GERAELAT+E++P++PI+E
Sbjct: 836 ELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILE 895
Query: 79 GFVILKKN 56
GFVIL+KN
Sbjct: 896 GFVILRKN 903
>BC007897-1|AAH07897.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 347 bits (853), Expect = 3e-95
Identities = 163/248 (65%), Positives = 201/248 (81%)
Frame = -3
Query: 799 GVAVIALAEETGAEMCTRIFGQLGRYGEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSH 620
G+A+IA+ EE GAEM R FG L RYGEP +RRAVPLA+AL SVSNP+L+++D L+K+SH
Sbjct: 656 GIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSH 715
Query: 619 DSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXLYHGKSPVHLFMVRLAQGLCHAGKGT 440
D+D +V+Y +IFAMG+VG+GTNN YH K P +LFMVRLAQGL H GKGT
Sbjct: 716 DADPEVSYYSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGT 775
Query: 439 VTLCPAHADRRLLNQPALAGLLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDE 260
+TLCP H+DR+L++Q A+AGLL VL +FLD + IILGKSHY+LY L AMQPR LVT DE
Sbjct: 776 LTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDE 835
Query: 259 NLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHTHTTPVLLSFGERAELATDEYIPLSPIME 80
L+PL VSVRVGQAVDV+G+AG PKTI G THTTPVLL+ GERAELAT+E++P++PI+E
Sbjct: 836 ELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILE 895
Query: 79 GFVILKKN 56
GFVIL+KN
Sbjct: 896 GFVILRKN 903
>X86446-1|CAA60167.1| 900|Homo sapiens 55.11 protein protein.
Length = 900
Score = 343 bits (844), Expect = 3e-94
Identities = 161/244 (65%), Positives = 198/244 (81%)
Frame = -3
Query: 799 GVAVIALAEETGAEMCTRIFGQLGRYGEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSH 620
G+A+IA+ EE GAEM R FG L RYGEP +RRAVPLA+AL SVSNP+L+++D L+K+SH
Sbjct: 647 GIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSH 706
Query: 619 DSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXLYHGKSPVHLFMVRLAQGLCHAGKGT 440
D+D +V+YN+IFAMG+VG+GTNN YH K P +LFMVRLAQGL H GKGT
Sbjct: 707 DADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGT 766
Query: 439 VTLCPAHADRRLLNQPALAGLLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDE 260
+TLCP H+DR+L++Q A+AGLL VL +FLD + IILGKSHY+LY L AMQPR LVT DE
Sbjct: 767 LTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDE 826
Query: 259 NLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHTHTTPVLLSFGERAELATDEYIPLSPIME 80
L+PL VSVRVGQAVDV+G+AG PKTI G THTTPVLL+ GERAELAT+E++P++PI+E
Sbjct: 827 ELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILE 886
Query: 79 GFVI 68
GFVI
Sbjct: 887 GFVI 890
>U12596-1|AAA87705.1| 853|Homo sapiens tumor necrosis factor type 1
receptor associated protein protein.
Length = 853
Score = 338 bits (831), Expect = 1e-92
Identities = 161/246 (65%), Positives = 198/246 (80%), Gaps = 2/246 (0%)
Frame = -3
Query: 799 GVAVIALAEETGAEMCTRIFGQLGRYGEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSH 620
G+A+IA+ EE GAEM R FG L RYGEP +RRAVPLA+AL SVSNP+L+++D L+K+SH
Sbjct: 598 GIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSH 657
Query: 619 DSDNDVAYNAIFAMGL--VGAGTNNXXXXXXXXXXXLYHGKSPVHLFMVRLAQGLCHAGK 446
D+D +V+YN+IFAMG+ VG+GTNN YH K P +LFMVRLAQGL H GK
Sbjct: 658 DADPEVSYNSIFAMGMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGK 717
Query: 445 GTVTLCPAHADRRLLNQPALAGLLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTL 266
GT+TLCP H+DR+L++Q A+AGLL VL +FLD + IILGKSHY+LY L AMQPR LVT
Sbjct: 718 GTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTF 777
Query: 265 DENLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHTHTTPVLLSFGERAELATDEYIPLSPI 86
DE L+PL VSVRVGQAVDV+G+AG PKTI G THTTPVLL+ GERAELAT+E++P++PI
Sbjct: 778 DEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPI 837
Query: 85 MEGFVI 68
+EGFVI
Sbjct: 838 LEGFVI 843
>U18247-1|AAA57339.1| 591|Homo sapiens p67 protein.
Length = 591
Score = 316 bits (776), Expect = 6e-86
Identities = 147/220 (66%), Positives = 181/220 (82%)
Frame = -3
Query: 727 RYGEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNX 548
RYGEP +RRAVPLA+AL SVSNP+L+++D L+K+SHD+D +V+YN+IFAMG+VG+GTNN
Sbjct: 362 RYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNA 421
Query: 547 XXXXXXXXXXLYHGKSPVHLFMVRLAQGLCHAGKGTVTLCPAHADRRLLNQPALAGLLVV 368
YH K P +LFMVRLAQGL H GKGT+TLCP H+DR+L++Q A+AGLL V
Sbjct: 422 RLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTV 481
Query: 367 LTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRVGQAVDVIGKAGTP 188
L +FLD + IILGKSHY+LY L AMQPR LVT DE L+PL VSVRVGQAVDV+G+AG P
Sbjct: 482 LVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKP 541
Query: 187 KTIAGSHTHTTPVLLSFGERAELATDEYIPLSPIMEGFVI 68
KTI G THTTPVLL+ GERAELAT+E++P++PI+EGFVI
Sbjct: 542 KTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVI 581
>AK125483-1|BAC86177.1| 125|Homo sapiens protein ( Homo sapiens
cDNA FLJ43494 fis, clone PEBLM2000170, moderately
similar to Sprouty homolog 3. ).
Length = 125
Score = 31.1 bits (67), Expect = 4.8
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -3
Query: 499 PVHLFMVRLAQGLCHAGKGTVTLCPAHADRRLLNQPALAGLLVVLTA 359
P HL +A + H+ + T P +L PAL GL++ L+A
Sbjct: 76 PQHLSQSSIASSMSHSTTASSTTAPLMMKTTVLMSPALVGLVLALSA 122
>BC016440-1|AAH16440.1| 408|Homo sapiens NARF protein protein.
Length = 408
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 508 GKSPVHLFMVRLAQGLCHAGKGTVTLCPAHADRRLLNQ 395
GK P H V G C G+G HAD+ LL Q
Sbjct: 314 GKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQ 351
>BC000438-1|AAH00438.1| 502|Homo sapiens NARF protein protein.
Length = 502
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 508 GKSPVHLFMVRLAQGLCHAGKGTVTLCPAHADRRLLNQ 395
GK P H V G C G+G HAD+ LL Q
Sbjct: 408 GKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQ 445
>AK000929-1|BAA91432.1| 456|Homo sapiens protein ( Homo sapiens
cDNA FLJ10067 fis, clone HEMBA1001526, weakly similar to
PERIPLASMIC [FE] HYDROGENASE 1 (EC 1.18.99.1). ).
Length = 456
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 508 GKSPVHLFMVRLAQGLCHAGKGTVTLCPAHADRRLLNQ 395
GK P H V G C G+G HAD+ LL Q
Sbjct: 362 GKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQ 399
>AF128406-1|AAD51446.1| 456|Homo sapiens nuclear prelamin A
recognition factor protein.
Length = 456
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 508 GKSPVHLFMVRLAQGLCHAGKGTVTLCPAHADRRLLNQ 395
GK P H V G C G+G HAD+ LL Q
Sbjct: 362 GKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQ 399
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,430,184
Number of Sequences: 237096
Number of extensions: 2250882
Number of successful extensions: 6288
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6287
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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