Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc12o19
         (809 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D87444-1|BAA13385.2|  692|Homo sapiens KIAA0255 protein.               30   8.6  
BC022850-1|AAH22850.1|  625|Homo sapiens transmembrane 9 superfa...    30   8.6  
BC021107-1|AAH21107.1|  625|Homo sapiens transmembrane 9 superfa...    30   8.6  
AL049539-3|CAB75607.2|  625|Homo sapiens transmembrane 9 superfa...    30   8.6  
AK126534-1|BAC86581.1|  528|Homo sapiens protein ( Homo sapiens ...    30   8.6  

>D87444-1|BAA13385.2|  692|Homo sapiens KIAA0255 protein.
          Length = 692

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 721 IRILFIYLQWMTEQFYFTFNFLVQIFIIL 807
           I + FI+      QFY+ F FL  +FIIL
Sbjct: 566 IELFFIFSAIWENQFYYLFGFLFLVFIIL 594


>BC022850-1|AAH22850.1|  625|Homo sapiens transmembrane 9
           superfamily protein member 4 protein.
          Length = 625

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 721 IRILFIYLQWMTEQFYFTFNFLVQIFIIL 807
           I + FI+      QFY+ F FL  +FIIL
Sbjct: 499 IELFFIFSAIWENQFYYLFGFLFLVFIIL 527


>BC021107-1|AAH21107.1|  625|Homo sapiens transmembrane 9
           superfamily protein member 4 protein.
          Length = 625

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 721 IRILFIYLQWMTEQFYFTFNFLVQIFIIL 807
           I + FI+      QFY+ F FL  +FIIL
Sbjct: 499 IELFFIFSAIWENQFYYLFGFLFLVFIIL 527


>AL049539-3|CAB75607.2|  625|Homo sapiens transmembrane 9
           superfamily protein member 4 protein.
          Length = 625

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 721 IRILFIYLQWMTEQFYFTFNFLVQIFIIL 807
           I + FI+      QFY+ F FL  +FIIL
Sbjct: 499 IELFFIFSAIWENQFYYLFGFLFLVFIIL 527


>AK126534-1|BAC86581.1|  528|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44570 fis, clone UTERU3011063, highly  similar
           to Transmembrane 9 superfamily protein member 4. ).
          Length = 528

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 721 IRILFIYLQWMTEQFYFTFNFLVQIFIIL 807
           I + FI+      QFY+ F FL  +FIIL
Sbjct: 402 IELFFIFSAIWENQFYYLFGFLFLVFIIL 430


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,609,424
Number of Sequences: 237096
Number of extensions: 2102278
Number of successful extensions: 2297
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2297
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)