Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12o10
(842 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020805-1|AAH20805.1| 310|Homo sapiens tRNA splicing endonucle... 110 5e-24
BC004530-1|AAH04530.1| 310|Homo sapiens TSEN34 protein protein. 110 5e-24
AK025929-1|BAB15284.1| 315|Homo sapiens protein ( Homo sapiens ... 110 5e-24
BC021975-1|AAH21975.2| 255|Homo sapiens TSEN2 protein protein. 34 0.56
BC019582-1|AAH19582.1| 465|Homo sapiens tRNA splicing endonucle... 34 0.56
BC004211-1|AAH04211.1| 465|Homo sapiens TSEN2 protein protein. 34 0.56
BC004178-1|AAH04178.1| 465|Homo sapiens TSEN2 protein protein. 34 0.56
AK074794-1|BAC11213.1| 439|Homo sapiens protein ( Homo sapiens ... 34 0.56
D13633-1|BAA02797.2| 876|Homo sapiens KIAA0008 protein. 33 1.7
BT007344-1|AAP36008.1| 765|Homo sapiens discs, large homolog 7 ... 33 1.7
BC016276-1|AAH16276.2| 846|Homo sapiens discs, large homolog 7 ... 33 1.7
BC010658-1|AAH10658.2| 846|Homo sapiens discs, large homolog 7 ... 33 1.7
AB076695-1|BAB97376.1| 846|Homo sapiens hepatoma up-regulated p... 33 1.7
BC146835-1|AAI46836.1| 716|Homo sapiens Unknown (protein for MG... 32 2.3
BC043504-1|AAH43504.1| 822|Homo sapiens IQ motif containing wit... 32 2.3
BC028699-1|AAH28699.1| 679|Homo sapiens IQCA protein protein. 32 2.3
AC093915-1|AAY24064.1| 383|Homo sapiens unknown protein. 32 2.3
AB046861-1|BAB13467.1| 718|Homo sapiens KIAA1641 protein protein. 32 2.3
AB023230-1|BAA76857.1| 1062|Homo sapiens KIAA1013 protein protein. 32 2.3
M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein. 32 3.0
J05211-1|AAA35766.1| 1752|Homo sapiens protein ( Human desmoplak... 32 3.0
AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein. 32 3.0
AY358688-1|AAQ89051.1| 121|Homo sapiens GALI1870 protein. 31 4.0
AK054711-1|BAB70798.1| 542|Homo sapiens protein ( Homo sapiens ... 31 4.0
AF273042-1|AAG34902.1| 685|Homo sapiens CTCL tumor antigen se1-... 31 5.2
CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein. 31 6.9
BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein comple... 31 6.9
BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein comple... 31 6.9
BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein comple... 31 6.9
AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of coat... 31 6.9
AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein pro... 31 6.9
AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein. 31 6.9
AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein. 31 6.9
AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein. 31 6.9
U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated pr... 30 9.1
U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated pr... 30 9.1
DQ309037-1|ABD73921.1| 430|Homo sapiens golgin-like hypothetica... 30 9.1
BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein. 30 9.1
BC047324-1|AAH47324.1| 1217|Homo sapiens structural maintenance ... 30 9.1
AL359260-2|CAI16576.1| 1217|Homo sapiens structural maintenance ... 30 9.1
AK093104-1|BAC04058.1| 371|Homo sapiens protein ( Homo sapiens ... 30 9.1
AK075128-1|BAC11420.1| 672|Homo sapiens protein ( Homo sapiens ... 30 9.1
AK074744-1|BAC11175.1| 672|Homo sapiens protein ( Homo sapiens ... 30 9.1
AK074210-1|BAB85017.1| 296|Homo sapiens protein ( Homo sapiens ... 30 9.1
AF450090-1|AAL47020.1| 672|Homo sapiens KCCR13L protein. 30 9.1
AF020043-1|AAC14893.1| 1217|Homo sapiens chromosome-associated p... 30 9.1
AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein. 30 9.1
>BC020805-1|AAH20805.1| 310|Homo sapiens tRNA splicing endonuclease
34 homolog (S. cerevisiae) protein.
Length = 310
Score = 110 bits (265), Expect = 5e-24
Identities = 87/301 (28%), Positives = 139/301 (46%), Gaps = 31/301 (10%)
Frame = -1
Query: 839 GIGYLWNSEHWYILRTQHRICSAFVGSVPSFPRQNDFLGLPIALSSEETALLVEKRICEL 660
G +W +E LR + + VG++P PRQN LGLP+ L EE LL E L
Sbjct: 9 GRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLLAEIGAVTL 68
Query: 659 ----------HEMPAEFCKYEPTEKDKELM-----------EEFLKKVLEQQASALKKRK 543
H + K + E +E +E L+K+ E QA+ KK+K
Sbjct: 69 VSAPRPDSRHHSLALTSFKRQQEESFQEQSALAAEARETRRQELLEKITEGQAA--KKQK 126
Query: 542 IEQLSQKIDIIVAGK----KKNLINKGMSDANIDKDAMLEEEI---KRIQDLDPDHTLVQ 384
+EQ S AG K++ + G + ++ + + L LVQ
Sbjct: 127 LEQASGASSSQEAGSSQAAKEDETSDGQASGEQEEAGPSSSQAGPSNGVAPLPRSALLVQ 186
Query: 383 LPQEMYRNIETSPVGLDVLR---PNILEGDGAVKYSIFKDLWEKGYYVTSGSKFGCDYLI 213
L R ++ P+ V P+ ++YSI++DLWE+G+++++ KFG D+L+
Sbjct: 187 LATARPRPVKARPLDWRVQSKDWPHAGRPAHELRYSIYRDLWERGFFLSAAGKFGGDFLV 246
Query: 212 YPGDPVQFHASHMVRCVCNQENVFHPKSLVAFGRLSVAVNKYAVFAYRTQCARIAYQTLQ 33
YPGDP++FHA ++ +C E+ + LVA GRL +V K + ++ Y +LQ
Sbjct: 247 YPGDPLRFHAHYIAQCWA-PEDTIPLQDLVAAGRLGTSVRKTLLLCSPQPDGKVVYTSLQ 305
Query: 32 W 30
W
Sbjct: 306 W 306
>BC004530-1|AAH04530.1| 310|Homo sapiens TSEN34 protein protein.
Length = 310
Score = 110 bits (265), Expect = 5e-24
Identities = 87/301 (28%), Positives = 139/301 (46%), Gaps = 31/301 (10%)
Frame = -1
Query: 839 GIGYLWNSEHWYILRTQHRICSAFVGSVPSFPRQNDFLGLPIALSSEETALLVEKRICEL 660
G +W +E LR + + VG++P PRQN LGLP+ L EE LL E L
Sbjct: 9 GRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLLAEIGAVTL 68
Query: 659 ----------HEMPAEFCKYEPTEKDKELM-----------EEFLKKVLEQQASALKKRK 543
H + K + E +E +E L+K+ E QA+ KK+K
Sbjct: 69 VSAPRPDSRHHSLALTSFKRQQEESFQEQSALAAEARETRRQELLEKITEGQAA--KKQK 126
Query: 542 IEQLSQKIDIIVAGK----KKNLINKGMSDANIDKDAMLEEEI---KRIQDLDPDHTLVQ 384
+EQ S AG K++ + G + ++ + + L LVQ
Sbjct: 127 LEQASGASSSQEAGSSQAAKEDETSDGQASGEQEEAGPSSSQAGPSNGVAPLPRSALLVQ 186
Query: 383 LPQEMYRNIETSPVGLDVLR---PNILEGDGAVKYSIFKDLWEKGYYVTSGSKFGCDYLI 213
L R ++ P+ V P+ ++YSI++DLWE+G+++++ KFG D+L+
Sbjct: 187 LATARPRPVKARPLDWRVQSKDWPHAGRPAHELRYSIYRDLWERGFFLSAAGKFGGDFLV 246
Query: 212 YPGDPVQFHASHMVRCVCNQENVFHPKSLVAFGRLSVAVNKYAVFAYRTQCARIAYQTLQ 33
YPGDP++FHA ++ +C E+ + LVA GRL +V K + ++ Y +LQ
Sbjct: 247 YPGDPLRFHAHYIAQCWA-PEDTIPLQDLVAAGRLGTSVRKTLLLCSPQPDGKVVYTSLQ 305
Query: 32 W 30
W
Sbjct: 306 W 306
>AK025929-1|BAB15284.1| 315|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22276 fis, clone HRC03723. ).
Length = 315
Score = 110 bits (265), Expect = 5e-24
Identities = 87/301 (28%), Positives = 139/301 (46%), Gaps = 31/301 (10%)
Frame = -1
Query: 839 GIGYLWNSEHWYILRTQHRICSAFVGSVPSFPRQNDFLGLPIALSSEETALLVEKRICEL 660
G +W +E LR + + VG++P PRQN LGLP+ L EE LL E L
Sbjct: 9 GRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLLAEIGAVTL 68
Query: 659 ----------HEMPAEFCKYEPTEKDKELM-----------EEFLKKVLEQQASALKKRK 543
H + K + E +E +E L+K+ E QA+ KK+K
Sbjct: 69 ISAPRPDSRHHSLALTSFKRQQEESFQEQSALAAEARETRRQELLEKITEGQAA--KKQK 126
Query: 542 IEQLSQKIDIIVAGK----KKNLINKGMSDANIDKDAMLEEEI---KRIQDLDPDHTLVQ 384
+EQ S AG K++ + G + ++ + + L LVQ
Sbjct: 127 LEQASGASSSQEAGSSQAAKEDETSDGQASGEQEEAGPSSSQAGPSNGVAPLPRSALLVQ 186
Query: 383 LPQEMYRNIETSPVGLDVLR---PNILEGDGAVKYSIFKDLWEKGYYVTSGSKFGCDYLI 213
L R ++ P+ V P+ ++YSI++DLWE+G+++++ KFG D+L+
Sbjct: 187 LATARPRPVKARPLDWRVQSKDWPHAGRPAHELRYSIYRDLWERGFFLSAAGKFGGDFLV 246
Query: 212 YPGDPVQFHASHMVRCVCNQENVFHPKSLVAFGRLSVAVNKYAVFAYRTQCARIAYQTLQ 33
YPGDP++FHA ++ +C E+ + LVA GRL +V K + ++ Y +LQ
Sbjct: 247 YPGDPLRFHAHYIAQCWA-PEDTIPLQDLVAAGRLGTSVRKTLLLCSPQPDGKVVYTSLQ 305
Query: 32 W 30
W
Sbjct: 306 W 306
>BC021975-1|AAH21975.2| 255|Homo sapiens TSEN2 protein protein.
Length = 255
Score = 34.3 bits (75), Expect = 0.56
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = -1
Query: 290 YSIFKDLWEKGYYVTSGSKFGCDYLIYPGDPVQFHASH--MVRCVCN--QENVFHP---K 132
Y + KG+ G K+G D L+Y P +HAS+ ++ V + + ++ P K
Sbjct: 133 YMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWK 192
Query: 131 SLVAFGRLSVAVNKYAVFAY 72
SL A R+SV V+K + Y
Sbjct: 193 SLAALSRVSVNVSKELMLCY 212
>BC019582-1|AAH19582.1| 465|Homo sapiens tRNA splicing endonuclease
2 homolog (S. cerevisiae) protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.56
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = -1
Query: 290 YSIFKDLWEKGYYVTSGSKFGCDYLIYPGDPVQFHASH--MVRCVCN--QENVFHP---K 132
Y + KG+ G K+G D L+Y P +HAS+ ++ V + + ++ P K
Sbjct: 343 YMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWK 402
Query: 131 SLVAFGRLSVAVNKYAVFAY 72
SL A R+SV V+K + Y
Sbjct: 403 SLAALSRVSVNVSKELMLCY 422
>BC004211-1|AAH04211.1| 465|Homo sapiens TSEN2 protein protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.56
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = -1
Query: 290 YSIFKDLWEKGYYVTSGSKFGCDYLIYPGDPVQFHASH--MVRCVCN--QENVFHP---K 132
Y + KG+ G K+G D L+Y P +HAS+ ++ V + + ++ P K
Sbjct: 343 YMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWK 402
Query: 131 SLVAFGRLSVAVNKYAVFAY 72
SL A R+SV V+K + Y
Sbjct: 403 SLAALSRVSVNVSKELMLCY 422
>BC004178-1|AAH04178.1| 465|Homo sapiens TSEN2 protein protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.56
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = -1
Query: 290 YSIFKDLWEKGYYVTSGSKFGCDYLIYPGDPVQFHASH--MVRCVCN--QENVFHP---K 132
Y + KG+ G K+G D L+Y P +HAS+ ++ V + + ++ P K
Sbjct: 343 YMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWK 402
Query: 131 SLVAFGRLSVAVNKYAVFAY 72
SL A R+SV V+K + Y
Sbjct: 403 SLAALSRVSVNVSKELMLCY 422
>AK074794-1|BAC11213.1| 439|Homo sapiens protein ( Homo sapiens
cDNA FLJ90313 fis, clone NT2RP2001388, weakly similar to
TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 (EC 3.1.27.9).
).
Length = 439
Score = 34.3 bits (75), Expect = 0.56
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = -1
Query: 290 YSIFKDLWEKGYYVTSGSKFGCDYLIYPGDPVQFHASH--MVRCVCN--QENVFHP---K 132
Y + KG+ G K+G D L+Y P +HAS+ ++ V + + ++ P K
Sbjct: 317 YMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWK 376
Query: 131 SLVAFGRLSVAVNKYAVFAY 72
SL A R+SV V+K + Y
Sbjct: 377 SLAALSRVSVNVSKELMLCY 396
>D13633-1|BAA02797.2| 876|Homo sapiens KIAA0008 protein.
Length = 876
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 679 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTKAEHIR 786
S N AVS N +G P+++ N G + TK+EH++
Sbjct: 672 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 707
>BT007344-1|AAP36008.1| 765|Homo sapiens discs, large homolog 7
(Drosophila) protein.
Length = 765
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 679 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTKAEHIR 786
S N AVS N +G P+++ N G + TK+EH++
Sbjct: 561 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 596
>BC016276-1|AAH16276.2| 846|Homo sapiens discs, large homolog 7
(Drosophila) protein.
Length = 846
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 679 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTKAEHIR 786
S N AVS N +G P+++ N G + TK+EH++
Sbjct: 642 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 677
>BC010658-1|AAH10658.2| 846|Homo sapiens discs, large homolog 7
(Drosophila) protein.
Length = 846
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 679 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTKAEHIR 786
S N AVS N +G P+++ N G + TK+EH++
Sbjct: 642 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 677
>AB076695-1|BAB97376.1| 846|Homo sapiens hepatoma up-regulated
protein protein.
Length = 846
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 679 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTKAEHIR 786
S N AVS N +G P+++ N G + TK+EH++
Sbjct: 642 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 677
>BC146835-1|AAI46836.1| 716|Homo sapiens Unknown (protein for
MGC:167812) protein.
Length = 716
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = -1
Query: 692 ALLVEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKI 519
A +++KRI E E+ ++ K+E E +KEL L+ ++Q+ K+R +E+L QK+
Sbjct: 254 ASVLQKRISEKEEIKSQL-KHEILELEKELCS--LRFAIQQEKK--KRRNVEELHQKV 306
>BC043504-1|AAH43504.1| 822|Homo sapiens IQ motif containing with
AAA domain protein.
Length = 822
Score = 32.3 bits (70), Expect = 2.3
Identities = 30/111 (27%), Positives = 50/111 (45%)
Frame = -1
Query: 620 EKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAM 441
EK KEL E +V E LK K+ ++ + AGKKK+ KG K
Sbjct: 427 EKRKELQSEIRIQVDELMRQELKNLKLAVDRERERPVKAGKKKD--KKG------KKGKK 478
Query: 440 LEEEIKRIQDLDPDHTLVQLPQEMYRNIETSPVGLDVLRPNILEGDGAVKY 288
E++ K+ +DL D T+ + +Y+ + + + L+ N+ + G Y
Sbjct: 479 KEKKAKKDKDLTADRTI----ESLYKELVEEGLLIQALKVNLSDYIGEYSY 525
>BC028699-1|AAH28699.1| 679|Homo sapiens IQCA protein protein.
Length = 679
Score = 32.3 bits (70), Expect = 2.3
Identities = 30/111 (27%), Positives = 50/111 (45%)
Frame = -1
Query: 620 EKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAM 441
EK KEL E +V E LK K+ ++ + AGKKK+ KG K
Sbjct: 427 EKRKELQSEIRIQVDELMRQELKNLKLAVDRERERPVKAGKKKDK-KKG------KKGKK 479
Query: 440 LEEEIKRIQDLDPDHTLVQLPQEMYRNIETSPVGLDVLRPNILEGDGAVKY 288
E++ K+ +DL D T+ + +Y+ + + + L+ N+ + G Y
Sbjct: 480 KEKKAKKDKDLTADRTI----ESLYKELVEEGLLIQALKVNLSDYIGEYSY 526
>AC093915-1|AAY24064.1| 383|Homo sapiens unknown protein.
Length = 383
Score = 32.3 bits (70), Expect = 2.3
Identities = 30/111 (27%), Positives = 50/111 (45%)
Frame = -1
Query: 620 EKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAM 441
EK KEL E +V E LK K+ ++ + AGKKK+ KG K
Sbjct: 187 EKRKELQSEIRIQVDELMRQELKNLKLAVDRERERPVKAGKKKD--KKG------KKGKK 238
Query: 440 LEEEIKRIQDLDPDHTLVQLPQEMYRNIETSPVGLDVLRPNILEGDGAVKY 288
E++ K+ +DL D T+ + +Y+ + + + L+ N+ + G Y
Sbjct: 239 KEKKAKKDKDLTADRTI----ESLYKELVEEGLLIQALKVNLSDYIGEYSY 285
>AB046861-1|BAB13467.1| 718|Homo sapiens KIAA1641 protein protein.
Length = 718
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = -1
Query: 692 ALLVEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKI 519
A +++KRI E E+ ++ K+E E +KEL L+ ++Q+ K+R +E+L QK+
Sbjct: 256 ASVLQKRISEKEEIKSQL-KHEILELEKELCS--LRFAIQQEKK--KRRNVEELHQKV 308
>AB023230-1|BAA76857.1| 1062|Homo sapiens KIAA1013 protein protein.
Length = 1062
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = -1
Query: 629 EPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNLINKGMSDA-NID 453
E +K+K L E+ LKKV E + L++ ++ K + G+K + + + A +D
Sbjct: 457 ELKKKEKLLQEKLLKKVEELKKICLREAELTGKMPKEYPLNIGEKPPQVRRRVGTAFKLD 516
Query: 452 KDAMLEEEIKRIQDLDPDHTLVQLPQEMYRNIETSP 345
+ + EE +Q+L+ + + Q E + + P
Sbjct: 517 DNLLPSEEDPALQELESNFLIQQKLVEAAKKLANEP 552
>M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein.
Length = 2871
Score = 31.9 bits (69), Expect = 3.0
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = -1
Query: 686 LVEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIV 507
L + R CE + + + E K+KE E L+ +L+++ + +KR+ E K+
Sbjct: 1142 LQKARQCEKENLGWQKLESEKAIKEKEYEIERLRVLLQEEGT--RKREYENELAKVRNHY 1199
Query: 506 AGKKKNLINKGMSDANIDKDAMLEEEIKRIQD 411
+ NL NK ++ NI K + E +++ D
Sbjct: 1200 NEEMSNLRNKYETEINITKTTIKEISMQKEDD 1231
>J05211-1|AAA35766.1| 1752|Homo sapiens protein ( Human desmoplakin
mRNA, 3' end. ).
Length = 1752
Score = 31.9 bits (69), Expect = 3.0
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = -1
Query: 686 LVEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIV 507
L + R CE + + + E K+KE E L+ +L+++ + +KR+ E K+
Sbjct: 23 LQKARQCEKENLGWQKLESEKAIKEKEYEIERLRVLLQEEGT--RKREYENELAKVRNHY 80
Query: 506 AGKKKNLINKGMSDANIDKDAMLEEEIKRIQD 411
+ NL NK ++ NI K + E +++ D
Sbjct: 81 NEEMSNLRNKYETEINITKTTIKEISMQKEDD 112
>AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein.
Length = 2871
Score = 31.9 bits (69), Expect = 3.0
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = -1
Query: 686 LVEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIV 507
L + R CE + + + E K+KE E L+ +L+++ + +KR+ E K+
Sbjct: 1142 LQKARQCEKENLGWQKLESEKAIKEKEYEIERLRVLLQEEGT--RKREYENELAKVRNHY 1199
Query: 506 AGKKKNLINKGMSDANIDKDAMLEEEIKRIQD 411
+ NL NK ++ NI K + E +++ D
Sbjct: 1200 NEEMSNLRNKYETEINITKTTIKEISMQKEDD 1231
>AY358688-1|AAQ89051.1| 121|Homo sapiens GALI1870 protein.
Length = 121
Score = 31.5 bits (68), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 367 YISCGSCTKVW-SGSKSCIL-FISSSNIAS-LSIFASDIPLFMRFFFFP 504
YISC +K+W SK C+L F+ + S LS+F+ I F FP
Sbjct: 65 YISCAKLSKIWFPASKPCLLAFLEVFLLMSRLSLFSKMICFLFLSFLFP 113
>AK054711-1|BAB70798.1| 542|Homo sapiens protein ( Homo sapiens
cDNA FLJ30149 fis, clone BRACE2000280, weakly similar to
MNN4 PROTEIN. ).
Length = 542
Score = 31.5 bits (68), Expect = 4.0
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = -1
Query: 620 EKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAM 441
EK KEL E +V E LK K+ ++ + AGKKK+ KG K
Sbjct: 434 EKRKELQSEIRIQVDELMRQELKNLKLAVDRERERPVKAGKKKDK-KKG------KKGKK 486
Query: 440 LEEEIKRIQDLDPDHTLVQLPQEM 369
E++ K+ +DL D T+ L +E+
Sbjct: 487 KEKKAKKDKDLTADRTIESLYKEL 510
>AF273042-1|AAG34902.1| 685|Homo sapiens CTCL tumor antigen se1-1
protein.
Length = 685
Score = 31.1 bits (67), Expect = 5.2
Identities = 14/63 (22%), Positives = 39/63 (61%)
Frame = -1
Query: 617 KDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAML 438
+DKE++ +K + E+ ++++K+K QLS+ +++ ++ K+ ++ + ++ M+
Sbjct: 423 EDKEVLSAEVKSLYEETINSVQKKK--QLSRDLEVFLSQKEDVILKEHITQLEKKLQLMV 480
Query: 437 EEE 429
EE+
Sbjct: 481 EEQ 483
>CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein.
Length = 308
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -1
Query: 458 IDKDAMLEEEIKRIQDLDPDHTLVQL 381
+D+ + +E+KR+QDLD D TL QL
Sbjct: 159 LDRLDLARKELKRMQDLDEDATLTQL 184
>BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -1
Query: 458 IDKDAMLEEEIKRIQDLDPDHTLVQL 381
+D+ + +E+KR+QDLD D TL QL
Sbjct: 159 LDRLDLARKELKRMQDLDEDATLTQL 184
>BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -1
Query: 458 IDKDAMLEEEIKRIQDLDPDHTLVQL 381
+D+ + +E+KR+QDLD D TL QL
Sbjct: 159 LDRLDLARKELKRMQDLDEDATLTQL 184
>BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -1
Query: 458 IDKDAMLEEEIKRIQDLDPDHTLVQL 381
+D+ + +E+KR+QDLD D TL QL
Sbjct: 159 LDRLDLARKELKRMQDLDEDATLTQL 184
>AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of
coatomer protein complex isoform a variant protein.
Length = 308
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -1
Query: 458 IDKDAMLEEEIKRIQDLDPDHTLVQL 381
+D+ + +E+KR+QDLD D TL QL
Sbjct: 159 LDRLDLARKELKRMQDLDEDATLTQL 184
>AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein
protein.
Length = 308
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -1
Query: 458 IDKDAMLEEEIKRIQDLDPDHTLVQL 381
+D+ + +E+KR+QDLD D TL QL
Sbjct: 159 LDRLDLARKELKRMQDLDEDATLTQL 184
>AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein.
Length = 308
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -1
Query: 458 IDKDAMLEEEIKRIQDLDPDHTLVQL 381
+D+ + +E+KR+QDLD D TL QL
Sbjct: 159 LDRLDLARKELKRMQDLDEDATLTQL 184
>AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein.
Length = 307
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -1
Query: 458 IDKDAMLEEEIKRIQDLDPDHTLVQL 381
+D+ + +E+KR+QDLD D TL QL
Sbjct: 158 LDRLDLARKELKRMQDLDEDATLTQL 183
>AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein.
Length = 245
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -1
Query: 458 IDKDAMLEEEIKRIQDLDPDHTLVQL 381
+D+ + +E+KR+QDLD D TL QL
Sbjct: 96 LDRLDLARKELKRMQDLDEDATLTQL 121
>U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated protein
1a protein.
Length = 2805
Score = 30.3 bits (65), Expect = 9.1
Identities = 30/123 (24%), Positives = 57/123 (46%)
Frame = -1
Query: 713 ALSSEETALLVEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQ 534
AL ++ AL + + E + E P EKDK L ++ LEQ+ AL+ K +
Sbjct: 1421 ALEQKDKALEPKDKDLEXKDKALEQKDKIPXEKDKALEQK--DTALEQKDKALEP-KDKD 1477
Query: 533 LSQKIDIIVAGKKKNLINKGMSDANIDKDAMLEEEIKRIQDLDPDHTLVQLPQEMYRNIE 354
L QK D ++ K+K +KD L+++++ ++ P+ T+ ++ +
Sbjct: 1478 LEQK-DRVLEQKEK---------IPEEKDKALDQKVRSVEHKAPEDTVAEMKDRDLEQTD 1527
Query: 353 TSP 345
+P
Sbjct: 1528 KAP 1530
>U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated protein
1a protein.
Length = 2805
Score = 30.3 bits (65), Expect = 9.1
Identities = 30/123 (24%), Positives = 57/123 (46%)
Frame = -1
Query: 713 ALSSEETALLVEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQ 534
AL ++ AL + + E + E P EKDK L ++ LEQ+ AL+ K +
Sbjct: 1421 ALEQKDKALEPKDKDLEXKDKALEQKDKIPXEKDKALEQK--DTALEQKDKALEP-KDKD 1477
Query: 533 LSQKIDIIVAGKKKNLINKGMSDANIDKDAMLEEEIKRIQDLDPDHTLVQLPQEMYRNIE 354
L QK D ++ K+K +KD L+++++ ++ P+ T+ ++ +
Sbjct: 1478 LEQK-DRVLEQKEK---------IPEEKDKALDQKVRSVEHKAPEDTVAEMKDRDLEQTD 1527
Query: 353 TSP 345
+P
Sbjct: 1528 KAP 1530
>DQ309037-1|ABD73921.1| 430|Homo sapiens golgin-like hypothetical
protein isoform I protein.
Length = 430
Score = 30.3 bits (65), Expect = 9.1
Identities = 24/109 (22%), Positives = 55/109 (50%)
Frame = -1
Query: 683 VEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVA 504
+E+ + +L AE EP E+ + L+K LE+ A AL+ + + +Q+I
Sbjct: 75 LERSLSKLKHQMAEPLPPEPPAVPSEVELQHLRKELERVAGALQAQV--EYNQRI----- 127
Query: 503 GKKKNLINKGMSDANIDKDAMLEEEIKRIQDLDPDHTLVQLPQEMYRNI 357
+L+N+G + +++ L+E+ +R+++ + + PQ ++ +
Sbjct: 128 ----SLLNEGQKERLREQEERLQEQQERLREQEERLQQLAEPQNSFKEL 172
>BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein.
Length = 1621
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +1
Query: 394 VWSGSKSCILFISSSNIASLSIFASDIPLFMRFFFFPATMI 516
+WS + S + A SIF SDIP F PATMI
Sbjct: 1136 IWSFCFYVVTVFSVAGFA-FSIFESDIPFIFTFLIPPATMI 1175
>BC047324-1|AAH47324.1| 1217|Homo sapiens structural maintenance of
chromosomes 3 protein.
Length = 1217
Score = 30.3 bits (65), Expect = 9.1
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -1
Query: 611 KELMEEFLKKVLEQQASAL--KKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAML 438
KE ++++KK L+ A+ KKR+I + + ++ A K+KNL D ++++
Sbjct: 388 KEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKAR 447
Query: 437 EEEIKR 420
EE+ R
Sbjct: 448 VEELDR 453
>AL359260-2|CAI16576.1| 1217|Homo sapiens structural maintenance of
chromosomes 3 protein.
Length = 1217
Score = 30.3 bits (65), Expect = 9.1
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -1
Query: 611 KELMEEFLKKVLEQQASAL--KKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAML 438
KE ++++KK L+ A+ KKR+I + + ++ A K+KNL D ++++
Sbjct: 388 KEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKAR 447
Query: 437 EEEIKR 420
EE+ R
Sbjct: 448 VEELDR 453
>AK093104-1|BAC04058.1| 371|Homo sapiens protein ( Homo sapiens
cDNA FLJ35785 fis, clone TESTI2005603, moderately
similar to Homo sapiens 88-kDa Golgi protein (GM88)
mRNA. ).
Length = 371
Score = 30.3 bits (65), Expect = 9.1
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Frame = -1
Query: 683 VEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVA 504
+E+ + +L AE EP E+ + L+K LE+ A AL+ + + +Q+I
Sbjct: 199 LERSLSKLKNQMAEPLPPEPPAVPSEVELQHLRKELERVAGALQAQV--KNNQRI----- 251
Query: 503 GKKKNLINKGMSDANIDKDAMLEEEIKRIQDLDPDHTLVQLPQEMY---RNIETSPVGLD 333
+L+N+G + +++ L ++ +RIQ+ + PQ ++ N S + L+
Sbjct: 252 ----SLLNRGQEERIREQEERLRKQEERIQEQHKSLQQLAKPQSVFEEPNNENKSALQLE 307
Query: 332 VLRPNILEGDGAVKYSIFKDLWEKGY 255
+ E G VK S +KG+
Sbjct: 308 QQVKELQEKLGEVKESETSTPSKKGW 333
>AK075128-1|BAC11420.1| 672|Homo sapiens protein ( Homo sapiens
cDNA FLJ90647 fis, clone PLACE1004282, highly similar to
KCCR13L. ).
Length = 672
Score = 30.3 bits (65), Expect = 9.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -3
Query: 348 SSRFGCIKTKYFGRRWCR*VFYIQRLMGERILCYQWIKIWM*L--SYIPRRSCAVSCLAY 175
S RFGC ++ +W + + L+G ++L I M S + R+ VSC A
Sbjct: 605 SGRFGCCSAAHYSAKWSHEAEFSKILIGPKMLTDHMPDILMRALDSVVSDRAACVSCPAQ 664
Query: 174 G 172
G
Sbjct: 665 G 665
>AK074744-1|BAC11175.1| 672|Homo sapiens protein ( Homo sapiens
cDNA FLJ90263 fis, clone NT2RM4000997, highly similar to
KCCR13L. ).
Length = 672
Score = 30.3 bits (65), Expect = 9.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -3
Query: 348 SSRFGCIKTKYFGRRWCR*VFYIQRLMGERILCYQWIKIWM*L--SYIPRRSCAVSCLAY 175
S RFGC ++ +W + + L+G ++L I M S + R+ VSC A
Sbjct: 605 SGRFGCCSAAHYSAKWSHEAEFSKILIGPKMLTDHMPDILMRALDSVVSDRAACVSCPAQ 664
Query: 174 G 172
G
Sbjct: 665 G 665
>AK074210-1|BAB85017.1| 296|Homo sapiens protein ( Homo sapiens
cDNA FLJ23630 fis, clone CAS03240. ).
Length = 296
Score = 30.3 bits (65), Expect = 9.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -3
Query: 348 SSRFGCIKTKYFGRRWCR*VFYIQRLMGERILCYQWIKIWM*L--SYIPRRSCAVSCLAY 175
S RFGC ++ +W + + L+G ++L I M S + R+ VSC A
Sbjct: 229 SGRFGCCSAAHYSAKWSHEAEFSKILIGPKMLTDHMPDILMRALDSVVSDRAACVSCPAQ 288
Query: 174 G 172
G
Sbjct: 289 G 289
>AF450090-1|AAL47020.1| 672|Homo sapiens KCCR13L protein.
Length = 672
Score = 30.3 bits (65), Expect = 9.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -3
Query: 348 SSRFGCIKTKYFGRRWCR*VFYIQRLMGERILCYQWIKIWM*L--SYIPRRSCAVSCLAY 175
S RFGC ++ +W + + L+G ++L I M S + R+ VSC A
Sbjct: 605 SGRFGCCSAAHYSAKWSHEAEFSKILIGPKMLTDHMPDILMRALDSVVSDRAACVSCPAQ 664
Query: 174 G 172
G
Sbjct: 665 G 665
>AF020043-1|AAC14893.1| 1217|Homo sapiens chromosome-associated
polypeptide protein.
Length = 1217
Score = 30.3 bits (65), Expect = 9.1
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -1
Query: 611 KELMEEFLKKVLEQQASAL--KKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAML 438
KE ++++KK L+ A+ KKR+I + + ++ A K+KNL D ++++
Sbjct: 388 KEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKAR 447
Query: 437 EEEIKR 420
EE+ R
Sbjct: 448 VEELDR 453
>AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein.
Length = 1591
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +1
Query: 394 VWSGSKSCILFISSSNIASLSIFASDIPLFMRFFFFPATMI 516
+WS + S + A SIF SDIP F PATMI
Sbjct: 1106 IWSFCFYVVTVFSVAGFA-FSIFESDIPFIFTFLIPPATMI 1145
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,969,154
Number of Sequences: 237096
Number of extensions: 2625195
Number of successful extensions: 18258
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 17974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18249
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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