Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12m16
(872 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 26 0.44
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 26 0.44
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 26 0.44
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 25 0.59
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 25 0.78
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 25 1.0
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 24 1.8
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 5.5
AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like pr... 21 9.6
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 25.8 bits (54), Expect = 0.44
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = -2
Query: 274 PINSAISVYLDVLNIFMRIAMILSGAGGNRRK*TKNNYWIRGIMLAISSITRHTENVVIP 95
PIN + + LDV+ + + + IL+ TK N W + ++ + + + V+
Sbjct: 55 PINLLVQIILDVILLILNVHTILTTI-------TKRNQWCK-LLENLKLDRENNSSFVVA 106
Query: 94 NIFVKLFNM*KISVFS 47
N+ +L ++ VF+
Sbjct: 107 NVLFQLIHVYYTVVFT 122
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 25.8 bits (54), Expect = 0.44
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = -2
Query: 274 PINSAISVYLDVLNIFMRIAMILSGAGGNRRK*TKNNYWIRGIMLAISSITRHTENVVIP 95
PIN + + LDV+ + + + IL+ TK N W + ++ + + + V+
Sbjct: 55 PINLLVQIILDVILLILNVHTILTTI-------TKRNQWCK-LLENLKLDRENNSSFVVA 106
Query: 94 NIFVKLFNM*KISVFS 47
N+ +L ++ VF+
Sbjct: 107 NVLFQLIHVYYTVVFT 122
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 25.8 bits (54), Expect = 0.44
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = -2
Query: 274 PINSAISVYLDVLNIFMRIAMILSGAGGNRRK*TKNNYWIRGIMLAISSITRHTENVVIP 95
PIN + + LDV+ + + + IL+ TK N W + ++ + + + V+
Sbjct: 375 PINLLVQIILDVILLILNVHTILTTI-------TKRNQWCK-LLENLKLDRENNSSFVVA 426
Query: 94 NIFVKLFNM*KISVFS 47
N+ +L ++ VF+
Sbjct: 427 NVLFQLIHVYYTVVFT 442
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 25.4 bits (53), Expect = 0.59
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 336 SYNKNPPNTIKPPYKLSEYNPAPRALVGGRNI 431
S N N PN+ + E P PR LV G+++
Sbjct: 435 STNSNKPNSSDLNMLIKETMPLPRKLVRGQDV 466
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 25.0 bits (52), Expect = 0.78
Identities = 31/105 (29%), Positives = 37/105 (35%), Gaps = 8/105 (7%)
Frame = +3
Query: 372 PYKLSEYNPAPRALVGGRNIPARDAANTAPR---PIASGARMFKNSPDGAHTAIVLRPPT 542
P++ Y A + GGR AR T PR AS A G A + P
Sbjct: 24 PHQHQHYGAAVQVPQGGRRRAARPGVVTTPRWGCARASSATTMGGPRYGRAAAQGMPYPR 83
Query: 543 TPAVYQAARIR-----IGPPRKQIGAMTAPIIPVCAIHANCLAPN 662
P Y IR GP ++ G P P AN APN
Sbjct: 84 FPP-YDRMDIRDRRSLHGPQQQMDGQEYRPDSPSSMHMANTAAPN 127
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 24.6 bits (51), Expect = 1.0
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 732 DIHPFLATKFRSAGVLKTATALPAVSTKEPAMYPYVVFIR 851
DI+P L T A L S K+P MY VV +R
Sbjct: 545 DINPSLCTHIIYAFATLKDHKLAEASDKDPEMYDRVVALR 584
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 149 ASNPIVIFRLLPPVATSSRQDHGNSHEYIQNIQINRYGRIDWVIWFESVGW 301
A N V++ LL + SR ++ +H + ++ + + +IW +V W
Sbjct: 40 AGNVGVLYTLLFGRSRKSRMNYFITHLALADLSVGLINVLTDIIWKTTVAW 90
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 5.5
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = +2
Query: 569 HQDWATKEANW 601
H DW TK + W
Sbjct: 1032 HPDWTTKPSTW 1042
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 402 PRALVGGRNIPARDAANTAPRP 467
P + R +P RDA P P
Sbjct: 71 PDLIADSRRLPLRDAVEKRPPP 92
>AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like
protein protein.
Length = 242
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 313 AEMHPPYGFKPYDPINSA 260
A + P G+ PYDP +A
Sbjct: 58 AGLQPTTGYYPYDPALAA 75
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,542
Number of Sequences: 336
Number of extensions: 6084
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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