Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12m11
(816 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015184-1|AAT94413.1| 589|Drosophila melanogaster RH67029p pro... 112 6e-25
AF039842-1|AAC04257.1| 591|Drosophila melanogaster Sprouty prot... 112 6e-25
AE014296-660|AAN11566.1| 589|Drosophila melanogaster CG1921-PC,... 112 6e-25
AE014296-659|AAF47772.1| 589|Drosophila melanogaster CG1921-PB,... 112 6e-25
AY122243-1|AAM52755.1| 1020|Drosophila melanogaster SD02228p pro... 35 0.15
AE013599-465|AAF59221.3| 983|Drosophila melanogaster CG30492-PB... 31 1.4
AE013599-464|AAF59220.5| 983|Drosophila melanogaster CG30492-PA... 31 1.4
AE013599-463|AAO41496.1| 938|Drosophila melanogaster CG30492-PE... 31 1.4
AE013599-462|AAO41495.1| 1020|Drosophila melanogaster CG30492-PC... 31 1.4
AY118911-1|AAM50771.1| 356|Drosophila melanogaster LD21610p pro... 29 7.6
AE014134-1201|AAF52466.1| 356|Drosophila melanogaster CG9200-PA... 29 7.6
>BT015184-1|AAT94413.1| 589|Drosophila melanogaster RH67029p
protein.
Length = 589
Score = 112 bits (269), Expect = 6e-25
Identities = 54/126 (42%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Frame = +3
Query: 312 IVCETCGRCRCEQCARPRPLPSRWLCG-SCLCSAEACVDYASCMCCVKALFYH------- 467
IVC CGRCRCEQC PRPLP W+C +CLCSAE+ +DYASC+CC KALFYH
Sbjct: 376 IVCPRCGRCRCEQCQSPRPLPQTWVCNKTCLCSAESVIDYASCLCCAKALFYHCARDNDL 435
Query: 468 --------XXXXXXXXXXXXXXXXRLACVGALAVPLPCLWLYWPXXXXXXXXXXXXXXXX 623
R +GAL++ LPCLW YWP
Sbjct: 436 DCDDGNGTPCVDNPCSCGPYKRTQRWGWLGALSIFLPCLWFYWPMRGCMKLCEKCYGRFA 495
Query: 624 XSGCRC 641
GCRC
Sbjct: 496 GRGCRC 501
>AF039842-1|AAC04257.1| 591|Drosophila melanogaster Sprouty
protein.
Length = 591
Score = 112 bits (269), Expect = 6e-25
Identities = 54/126 (42%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Frame = +3
Query: 312 IVCETCGRCRCEQCARPRPLPSRWLCG-SCLCSAEACVDYASCMCCVKALFYH------- 467
IVC CGRCRCEQC PRPLP W+C +CLCSAE+ +DYASC+CC KALFYH
Sbjct: 378 IVCPRCGRCRCEQCQSPRPLPQTWVCNKTCLCSAESVIDYASCLCCAKALFYHCARDNDL 437
Query: 468 --------XXXXXXXXXXXXXXXXRLACVGALAVPLPCLWLYWPXXXXXXXXXXXXXXXX 623
R +GAL++ LPCLW YWP
Sbjct: 438 DCDDGNGTPCVDNPCSCGPYKRTQRWGWLGALSIFLPCLWFYWPMRGCMKLCEKCYGRFA 497
Query: 624 XSGCRC 641
GCRC
Sbjct: 498 GRGCRC 503
>AE014296-660|AAN11566.1| 589|Drosophila melanogaster CG1921-PC,
isoform C protein.
Length = 589
Score = 112 bits (269), Expect = 6e-25
Identities = 54/126 (42%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Frame = +3
Query: 312 IVCETCGRCRCEQCARPRPLPSRWLCG-SCLCSAEACVDYASCMCCVKALFYH------- 467
IVC CGRCRCEQC PRPLP W+C +CLCSAE+ +DYASC+CC KALFYH
Sbjct: 376 IVCPRCGRCRCEQCQSPRPLPQTWVCNKTCLCSAESVIDYASCLCCAKALFYHCARDNDL 435
Query: 468 --------XXXXXXXXXXXXXXXXRLACVGALAVPLPCLWLYWPXXXXXXXXXXXXXXXX 623
R +GAL++ LPCLW YWP
Sbjct: 436 DCDDGNGTPCVDNPCSCGPYKRTQRWGWLGALSIFLPCLWFYWPMRGCMKLCEKCYGRFA 495
Query: 624 XSGCRC 641
GCRC
Sbjct: 496 GRGCRC 501
>AE014296-659|AAF47772.1| 589|Drosophila melanogaster CG1921-PB,
isoform B protein.
Length = 589
Score = 112 bits (269), Expect = 6e-25
Identities = 54/126 (42%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Frame = +3
Query: 312 IVCETCGRCRCEQCARPRPLPSRWLCG-SCLCSAEACVDYASCMCCVKALFYH------- 467
IVC CGRCRCEQC PRPLP W+C +CLCSAE+ +DYASC+CC KALFYH
Sbjct: 376 IVCPRCGRCRCEQCQSPRPLPQTWVCNKTCLCSAESVIDYASCLCCAKALFYHCARDNDL 435
Query: 468 --------XXXXXXXXXXXXXXXXRLACVGALAVPLPCLWLYWPXXXXXXXXXXXXXXXX 623
R +GAL++ LPCLW YWP
Sbjct: 436 DCDDGNGTPCVDNPCSCGPYKRTQRWGWLGALSIFLPCLWFYWPMRGCMKLCEKCYGRFA 495
Query: 624 XSGCRC 641
GCRC
Sbjct: 496 GRGCRC 501
>AY122243-1|AAM52755.1| 1020|Drosophila melanogaster SD02228p
protein.
Length = 1020
Score = 34.7 bits (76), Expect = 0.15
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 312 IVCETCGR--CRCEQCARPRPLPSRWLCGSCLCSAEACVDYAS 434
+ C TCG+ CR +CA RP ++W C C S E+ +S
Sbjct: 118 VTCCTCGKSVCRGPKCADWRPKDAKWECQLCQSSKESLAHTSS 160
>AE013599-465|AAF59221.3| 983|Drosophila melanogaster CG30492-PB,
isoform B protein.
Length = 983
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 312 IVCETCGR--CRCEQCARPRPLPSRWLCGSCLCSAEACVDYAS 434
+ C TC + CR +CA RP ++W C C S E+ +S
Sbjct: 81 VTCCTCEKSVCRGPKCADWRPKDAKWECQLCQSSKESLAHTSS 123
>AE013599-464|AAF59220.5| 983|Drosophila melanogaster CG30492-PA,
isoform A protein.
Length = 983
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 312 IVCETCGR--CRCEQCARPRPLPSRWLCGSCLCSAEACVDYAS 434
+ C TC + CR +CA RP ++W C C S E+ +S
Sbjct: 81 VTCCTCEKSVCRGPKCADWRPKDAKWECQLCQSSKESLAHTSS 123
>AE013599-463|AAO41496.1| 938|Drosophila melanogaster CG30492-PE,
isoform E protein.
Length = 938
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 312 IVCETCGR--CRCEQCARPRPLPSRWLCGSCLCSAEACVDYAS 434
+ C TC + CR +CA RP ++W C C S E+ +S
Sbjct: 118 VTCCTCEKSVCRGPKCADWRPKDAKWECQLCQSSKESLAHTSS 160
>AE013599-462|AAO41495.1| 1020|Drosophila melanogaster CG30492-PC,
isoform C protein.
Length = 1020
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 312 IVCETCGR--CRCEQCARPRPLPSRWLCGSCLCSAEACVDYAS 434
+ C TC + CR +CA RP ++W C C S E+ +S
Sbjct: 118 VTCCTCEKSVCRGPKCADWRPKDAKWECQLCQSSKESLAHTSS 160
>AY118911-1|AAM50771.1| 356|Drosophila melanogaster LD21610p
protein.
Length = 356
Score = 29.1 bits (62), Expect = 7.6
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +3
Query: 339 RCEQCARPRPLPSRWLCGSCLCSAEACVD 425
+C +C ++W C SC C C D
Sbjct: 304 KCAECEEASVTRTQWRCNSCYCYLNLCGD 332
>AE014134-1201|AAF52466.1| 356|Drosophila melanogaster CG9200-PA
protein.
Length = 356
Score = 29.1 bits (62), Expect = 7.6
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +3
Query: 339 RCEQCARPRPLPSRWLCGSCLCSAEACVD 425
+C +C ++W C SC C C D
Sbjct: 304 KCAECEEASVTRTQWRCNSCYCYLNLCGD 332
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,379,763
Number of Sequences: 53049
Number of extensions: 417241
Number of successful extensions: 2004
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1999
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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