Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12k16
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 40 0.002
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 40 0.002
U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical pr... 38 0.008
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 37 0.015
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 37 0.015
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 37 0.015
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 36 0.026
AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical ... 36 0.026
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 36 0.026
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 35 0.059
AC024849-1|AAK68546.2| 374|Caenorhabditis elegans Hypothetical ... 35 0.059
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 35 0.078
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 34 0.10
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 34 0.10
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 34 0.10
AL033514-27|CAA22088.1| 363|Caenorhabditis elegans Hypothetical... 34 0.10
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 34 0.14
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 34 0.14
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 34 0.14
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 34 0.14
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 34 0.14
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 33 0.24
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 33 0.32
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 33 0.32
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 33 0.32
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 33 0.32
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 33 0.32
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 32 0.42
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 32 0.55
U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical pr... 31 0.73
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 31 0.73
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 31 0.73
CU457741-9|CAM36350.2| 252|Caenorhabditis elegans Hypothetical ... 31 0.73
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 31 0.97
U80836-4|AAB37891.2| 329|Caenorhabditis elegans Hypothetical pr... 30 1.7
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 30 1.7
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL034393-9|CAA22314.1| 248|Caenorhabditis elegans Hypothetical ... 30 1.7
AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical ... 30 1.7
Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical p... 30 2.2
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 30 2.2
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF068709-15|AAC19246.2| 317|Caenorhabditis elegans Serpentine r... 30 2.2
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 30 2.2
Z71259-4|CAA95788.2| 501|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z50110-3|CAA90445.2| 459|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical p... 29 5.1
Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical p... 29 5.1
Z81097-14|CAB03171.2| 221|Caenorhabditis elegans Hypothetical p... 29 5.1
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 29 5.1
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical ... 29 5.1
AC017117-1|AAF16618.1| 338|Caenorhabditis elegans Hypothetical ... 29 5.1
Z81066-3|CAI46608.1| 363|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 6.8
Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical pr... 28 9.0
U80450-6|AAB37831.1| 544|Caenorhabditis elegans Hypothetical pr... 28 9.0
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 28 9.0
AL132904-25|CAB81956.2| 434|Caenorhabditis elegans Hypothetical... 28 9.0
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 40.3 bits (90), Expect = 0.002
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Frame = -2
Query: 443 EKSLLD-DAEDSNNAANSDDTMLSESQAILKKLQIDIAE-QTQLNIK-RQLD-----LNK 288
EKS L D E+S +A +S+ + + LK +++ +E QT+ + + RQL N+
Sbjct: 1233 EKSKLQRDLEESQHATDSEVRSRQDLEKALKTIEVQYSELQTKADEQSRQLQDFAALKNR 1292
Query: 287 LQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNE 108
L + + L+ + N N++H+ LQ + T + + + LAA L +E
Sbjct: 1293 LNNENSDLNRSLEEMDNQLNSLHRLKSTLQSQLDETRRNYDEESRERQALAATAKNLEHE 1352
Query: 107 NKVLSNKNIELIKHKNLLQNEYTTLQS 27
N +L E + K L + + L +
Sbjct: 1353 NTILREHLDEEAESKADLTRQISKLNA 1379
Score = 35.9 bits (79), Expect = 0.034
Identities = 29/131 (22%), Positives = 53/131 (40%)
Frame = -2
Query: 419 EDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIK 240
EDS N + ++ + +L + +L K + + +KLQ+ Q D
Sbjct: 1193 EDSLNHETAISSLRKRHGDSVAELTEQLETLQKLKAKSEAEKSKLQRDLEESQHATDSEV 1252
Query: 239 NDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKN 60
++ K+ K ++++ + + AA RL+NEN L+ E+ N
Sbjct: 1253 RSRQDLEKALKTIEVQYSELQTKADEQSRQLQDFAALKNRLNNENSDLNRSLEEMDNQLN 1312
Query: 59 LLQNEYTTLQS 27
L +TLQS
Sbjct: 1313 SLHRLKSTLQS 1323
Score = 33.9 bits (74), Expect = 0.14
Identities = 29/135 (21%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Frame = -2
Query: 440 KSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDI-AEQTQLNIKRQLDLNKLQQTSVFM 264
+SL D+ + + A + + +KL D+ +E+ ++N ++ NKL+Q +
Sbjct: 989 RSLQDEMANQDEAVAKLNKEKKHQEESNRKLNEDLQSEEDKVNHLEKIR-NKLEQQMDEL 1047
Query: 263 QEKLDRIKNDYNNMHKSFK----ELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVL 96
+E +DR K ++ K+ + +L++ + + ++ K +D L K L + N L
Sbjct: 1048 EENIDREKRSRGDIEKAKRKVEGDLKVAQENIDEITKQKHDVETTLKRKEEDLHHTNAKL 1107
Query: 95 SNKNIELIKHKNLLQ 51
+ N + K + L++
Sbjct: 1108 AENNSIIAKLQRLIK 1122
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 40.3 bits (90), Expect = 0.002
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Frame = -2
Query: 443 EKSLLD-DAEDSNNAANSDDTMLSESQAILKKLQIDIAE-QTQLNIK-RQLD-----LNK 288
EKS L D E+S +A +S+ + + LK +++ +E QT+ + + RQL N+
Sbjct: 1233 EKSKLQRDLEESQHATDSEVRSRQDLEKALKTIEVQYSELQTKADEQSRQLQDFAALKNR 1292
Query: 287 LQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNE 108
L + + L+ + N N++H+ LQ + T + + + LAA L +E
Sbjct: 1293 LNNENSDLNRSLEEMDNQLNSLHRLKSTLQSQLDETRRNYDEESRERQALAATAKNLEHE 1352
Query: 107 NKVLSNKNIELIKHKNLLQNEYTTLQS 27
N +L E + K L + + L +
Sbjct: 1353 NTILREHLDEEAESKADLTRQISKLNA 1379
Score = 35.9 bits (79), Expect = 0.034
Identities = 29/131 (22%), Positives = 53/131 (40%)
Frame = -2
Query: 419 EDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIK 240
EDS N + ++ + +L + +L K + + +KLQ+ Q D
Sbjct: 1193 EDSLNHETAISSLRKRHGDSVAELTEQLETLQKLKAKSEAEKSKLQRDLEESQHATDSEV 1252
Query: 239 NDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKN 60
++ K+ K ++++ + + AA RL+NEN L+ E+ N
Sbjct: 1253 RSRQDLEKALKTIEVQYSELQTKADEQSRQLQDFAALKNRLNNENSDLNRSLEEMDNQLN 1312
Query: 59 LLQNEYTTLQS 27
L +TLQS
Sbjct: 1313 SLHRLKSTLQS 1323
Score = 33.9 bits (74), Expect = 0.14
Identities = 29/135 (21%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Frame = -2
Query: 440 KSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDI-AEQTQLNIKRQLDLNKLQQTSVFM 264
+SL D+ + + A + + +KL D+ +E+ ++N ++ NKL+Q +
Sbjct: 989 RSLQDEMANQDEAVAKLNKEKKHQEESNRKLNEDLQSEEDKVNHLEKIR-NKLEQQMDEL 1047
Query: 263 QEKLDRIKNDYNNMHKSFK----ELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVL 96
+E +DR K ++ K+ + +L++ + + ++ K +D L K L + N L
Sbjct: 1048 EENIDREKRSRGDIEKAKRKVEGDLKVAQENIDEITKQKHDVETTLKRKEEDLHHTNAKL 1107
Query: 95 SNKNIELIKHKNLLQ 51
+ N + K + L++
Sbjct: 1108 AENNSIIAKLQRLIK 1122
>U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical
protein F48E3.9 protein.
Length = 272
Score = 37.9 bits (84), Expect = 0.008
Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Frame = -2
Query: 383 MLSESQAILKKL---QIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKS 213
M+SE +++L++L Q I E +++L + + + +KL +D +++ S
Sbjct: 1 MVSEKKSLLEELLHMQKRIDELAPACAEKELKIVAKDNEKLDLSKKLRLANSDISHLQTS 60
Query: 212 FKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIE 78
L+ + S + LKS+NDD L ++ + +E++ L K++E
Sbjct: 61 MMHLRDEVSSKDNELKSMNDDILYLKSQLLIVESESRELKAKDLE 105
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 37.1 bits (82), Expect = 0.015
Identities = 26/115 (22%), Positives = 56/115 (48%)
Frame = -2
Query: 380 LSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKEL 201
++ESQ + + A++ + + +Q K + ++ +Q+ +D + + +
Sbjct: 552 IAESQVKEFLNKFENADEARRRLDKQFADAKREISN--LQKSVDEAERNSRRTDDKLRAS 609
Query: 200 QLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTT 36
+ +R++ EKA K L D+ AKL A + S ++ E+ +H N +Q E+ T
Sbjct: 610 EAERVAAEKARKFLEDELAKLQASFQKSSTDD--ARKLRDEMDEHTNSIQEEFKT 662
Score = 31.1 bits (67), Expect = 0.97
Identities = 24/115 (20%), Positives = 53/115 (46%)
Frame = -2
Query: 446 FEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVF 267
F+KS DDA + + + E K +ID + N+ R+ N+L+
Sbjct: 634 FQKSSTDDARKLRDEMDEHTNSIQEEF----KTRIDELNRRVENLLREN--NRLKSEVNP 687
Query: 266 MQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENK 102
+++K ++N+YN+ + +E + + ++ +++ D L K R+ +N+
Sbjct: 688 LKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNE 742
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 37.1 bits (82), Expect = 0.015
Identities = 26/115 (22%), Positives = 56/115 (48%)
Frame = -2
Query: 380 LSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKEL 201
++ESQ + + A++ + + +Q K + ++ +Q+ +D + + +
Sbjct: 625 IAESQVKEFLNKFENADEARRRLDKQFADAKREISN--LQKSVDEAERNSRRTDDKLRAS 682
Query: 200 QLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTT 36
+ +R++ EKA K L D+ AKL A + S ++ E+ +H N +Q E+ T
Sbjct: 683 EAERVAAEKARKFLEDELAKLQASFQKSSTDD--ARKLRDEMDEHTNSIQEEFKT 735
Score = 31.1 bits (67), Expect = 0.97
Identities = 24/115 (20%), Positives = 53/115 (46%)
Frame = -2
Query: 446 FEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVF 267
F+KS DDA + + + E K +ID + N+ R+ N+L+
Sbjct: 707 FQKSSTDDARKLRDEMDEHTNSIQEEF----KTRIDELNRRVENLLREN--NRLKSEVNP 760
Query: 266 MQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENK 102
+++K ++N+YN+ + +E + + ++ +++ D L K R+ +N+
Sbjct: 761 LKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNE 815
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 37.1 bits (82), Expect = 0.015
Identities = 26/115 (22%), Positives = 56/115 (48%)
Frame = -2
Query: 380 LSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKEL 201
++ESQ + + A++ + + +Q K + ++ +Q+ +D + + +
Sbjct: 625 IAESQVKEFLNKFENADEARRRLDKQFADAKREISN--LQKSVDEAERNSRRTDDKLRAS 682
Query: 200 QLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTT 36
+ +R++ EKA K L D+ AKL A + S ++ E+ +H N +Q E+ T
Sbjct: 683 EAERVAAEKARKFLEDELAKLQASFQKSSTDD--ARKLRDEMDEHTNSIQEEFKT 735
Score = 31.1 bits (67), Expect = 0.97
Identities = 24/115 (20%), Positives = 53/115 (46%)
Frame = -2
Query: 446 FEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVF 267
F+KS DDA + + + E K +ID + N+ R+ N+L+
Sbjct: 707 FQKSSTDDARKLRDEMDEHTNSIQEEF----KTRIDELNRRVENLLREN--NRLKSEVNP 760
Query: 266 MQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENK 102
+++K ++N+YN+ + +E + + ++ +++ D L K R+ +N+
Sbjct: 761 LKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNE 815
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical
protein F35G12.8 protein.
Length = 1549
Score = 36.3 bits (80), Expect = 0.026
Identities = 33/168 (19%), Positives = 75/168 (44%), Gaps = 3/168 (1%)
Frame = -2
Query: 578 ESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDD-AEDSN-- 408
E + V +++ T+ + +K D F+ S A +K + + A+ SN
Sbjct: 439 EKAERKIAKCQEEVEQLLEIEKTANEEADKNLDEFEKRSEAPKEEQKKIQETWAQKSNEF 498
Query: 407 NAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYN 228
N + + E LKKL ++ + +K++L+ + +++ +++LD++K +++
Sbjct: 499 NKVRGEARIAREDFEDLKKLANSGTDKL-IELKKRLESS--EESYAKEKDELDKLKPEFD 555
Query: 227 NMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKN 84
+ + K+L + + + N D AK + L +N S+ N
Sbjct: 556 SWNDKLKQLSTELPTLRNTARQKNQDLAKTRDRLETLRQQNSSCSSSN 603
>AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical
protein B0281.8 protein.
Length = 292
Score = 36.3 bits (80), Expect = 0.026
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Frame = -2
Query: 656 CKHQLCSMCXXXXXXXXXIPCPLCR--VESLHFNVYSINRN--VVDVIKCSVTSVAQWNK 489
C H LC C + CP CR E +N+ S+++N ++ +IK VT + K
Sbjct: 28 CSHTLCEGCIKKLLKNGRVVCPFCREPTEVPVYNIKSLHKNFSLIQMIKI-VTKTTEVEK 86
Query: 488 INDNF------------DAASLASVLFEKSLL---DDAEDSNNAANSDDTMLSESQAILK 354
DNF + A + S K+ L E + ++ + +++++ K
Sbjct: 87 NWDNFPPKCVEHPYNVAEFACIESNCSSKNKLMCQTCEEFGAHKGHAKELLITKTDKFRK 146
Query: 353 KLQIDIAEQTQLNIKR-QLDLNKLQQTSVFMQE----KLDRIKNDYNNMHKS 213
KL+ I Q +LNI+ + N+L++ V ++ K+ +IKN ++ + +S
Sbjct: 147 KLEFWI-NQLKLNIQNCTVKKNELEEAVVKSEQLLNIKVKKIKNHFDKIRQS 197
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = -2
Query: 296 LNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARL 117
L Q+ + QEKL +++ DY+++H+ F L+L+ EK ++ KLAAK+ +
Sbjct: 1659 LQMTQERLIESQEKLIQMERDYSSLHEKFDRLKLRFDRDEKPTGAVLVLSDKLAAKDREI 1718
Query: 116 SN-ENKVLSNKN 84
+ +N++ +N
Sbjct: 1719 AQLKNRIAHLQN 1730
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 35.1 bits (77), Expect = 0.059
Identities = 29/137 (21%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Frame = -2
Query: 443 EKSLLDDAEDSNNAANSDDTMLSESQAILKK----LQIDIAEQTQLNIKRQLDLNKLQQT 276
EK L+ E++ S+ + +L+K L++ + E ++ + L +L+
Sbjct: 263 EKMLMQQVEEAVKKTKSEREAAKTLEQLLEKRIEELEMKLTEPNGEKLQFEHQLEELKSR 322
Query: 275 SVFMQEK---LDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSN-- 111
+ +K +D +++ + K F ELQ + ++ L+ +D L K L
Sbjct: 323 CEELTDKALKVDVMQHSIEDYEKKFVELQEMKEEADEQLQKAKEDIETLQMKYVELETTI 382
Query: 110 ENKVLSNKNIELIKHKN 60
+V SN IE +K ++
Sbjct: 383 NKEVFSNSEIETLKSEH 399
>AC024849-1|AAK68546.2| 374|Caenorhabditis elegans Hypothetical
protein Y67D8B.1 protein.
Length = 374
Score = 35.1 bits (77), Expect = 0.059
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = -2
Query: 770 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXIPCP 591
M KL +CF ++ +P D ++PV L C H +C +C CP
Sbjct: 1 MNLEKLSELLCFQCGKLYESITKPDDEAILVPV--LGACLHSICILC--ATGLESPNSCP 56
Query: 590 LCRVESLHFNVYS 552
+C N+ S
Sbjct: 57 ICENPEAFGNIIS 69
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 34.7 bits (76), Expect = 0.078
Identities = 18/84 (21%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = -2
Query: 506 VAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQ 327
+ Q ++++ NF L + + + L+DD ++ A + + + +QA+ +K+ + E+
Sbjct: 498 IQQLDQVHQNFMRYKLLMLRYSEYLIDDCDEKEKAQEAIQKLENVTQAVNQKMGLPTTEE 557
Query: 326 -TQLNIKRQLDLNKLQQTSVFMQE 258
T+L + Q N L+ V +++
Sbjct: 558 LTKLYYRFQCQFNVLEPGRVLIRQ 581
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 34.3 bits (75), Expect = 0.10
Identities = 30/132 (22%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Frame = -2
Query: 473 DAASLASVLF-EKSLLDDAE----DSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIK 309
+ AS+ S+L E+SLL++ + +++ N L+ES+ K + ++ E L
Sbjct: 421 ELASMGSLLDKERSLLEEKNKEISERDSSINDLKEKLAESEKKATKYKNELKEHADLVEN 480
Query: 308 RQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAK 129
L LNKLQ+ S ++ +++I + ++L+ +++ L++ ++ K + +
Sbjct: 481 LTLQLNKLQENS---KDLMEKISAGEGGAKMAIEQLEQEKVKLTNELQTSSEKTKKASGE 537
Query: 128 -NARLSNENKVL 96
A++S K L
Sbjct: 538 LEAKISELEKKL 549
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 34.3 bits (75), Expect = 0.10
Identities = 30/132 (22%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Frame = -2
Query: 473 DAASLASVLF-EKSLLDDAE----DSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIK 309
+ AS+ S+L E+SLL++ + +++ N L+ES+ K + ++ E L
Sbjct: 423 ELASMGSLLDKERSLLEEKNKEISERDSSINDLKEKLAESEKKATKYKNELKEHADLVEN 482
Query: 308 RQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAK 129
L LNKLQ+ S ++ +++I + ++L+ +++ L++ ++ K + +
Sbjct: 483 LTLQLNKLQENS---KDLMEKISAGEGGAKMAIEQLEQEKVKLTNELQTSSEKTKKASGE 539
Query: 128 -NARLSNENKVL 96
A++S K L
Sbjct: 540 LEAKISELEKKL 551
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 34.3 bits (75), Expect = 0.10
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -2
Query: 770 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXIPCP 591
+EF +QC+ICF V N+ +P+ L TCKH +C+ C + CP
Sbjct: 19 LEFEDVQCHICFQV----NH--EPVTFL---------TCKHSICAGCAGRWLSSCSV-CP 62
Query: 590 LC--RVESLHFN 561
+C RV +H N
Sbjct: 63 MCRTRVREIHLN 74
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 34.3 bits (75), Expect = 0.10
Identities = 30/132 (22%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Frame = -2
Query: 473 DAASLASVLF-EKSLLDDAE----DSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIK 309
+ AS+ S+L E+SLL++ + +++ N L+ES+ K + ++ E L
Sbjct: 423 ELASMGSLLDKERSLLEEKNKEISERDSSINDLKEKLAESEKKATKYKNELKEHADLVEN 482
Query: 308 RQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAK 129
L LNKLQ+ S ++ +++I + ++L+ +++ L++ ++ K + +
Sbjct: 483 LTLQLNKLQENS---KDLMEKISAGEGGAKMAIEQLEQEKVKLTNELQTSSEKTKKASGE 539
Query: 128 -NARLSNENKVL 96
A++S K L
Sbjct: 540 LEAKISELEKKL 551
>AL033514-27|CAA22088.1| 363|Caenorhabditis elegans Hypothetical
protein Y75B8A.28 protein.
Length = 363
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/89 (24%), Positives = 47/89 (52%)
Frame = -2
Query: 449 LFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSV 270
+++KSLL+ +D D +++E +KK ++D+A + N K + K+ Q V
Sbjct: 275 IWQKSLLERQKD-------DTLVVAEKLQNIKKRELDVATYNKDNKKEMAEREKVSQ--V 325
Query: 269 FMQEKLDRIKNDYNNMHKSFKELQLKRIS 183
+ +R+K D+ +H +++ L+ +S
Sbjct: 326 TFATRHNRVKMDFETIHYNYEAKVLEYVS 354
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 33.9 bits (74), Expect = 0.14
Identities = 29/139 (20%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Frame = -2
Query: 437 SLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDL--NKLQQTSVFM 264
+L D ED+ +S + + L KL+ + E++QL + +++ K Q + +
Sbjct: 72 ALTDRLEDAEGTTDSQIESNRKREGELSKLR-KLLEESQLESEDAMNVLRKKHQDSCLDY 130
Query: 263 QEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKN 84
Q+++++++ + + + +Q + I + L D R + L+NK
Sbjct: 131 QDQIEQLQKKNAKIDRERQRVQHEVIELTATIDQLQKDKHTAEKAAERFEAQANELANKV 190
Query: 83 IELIKHKNLLQNEYTTLQS 27
+L KH N L + LQ+
Sbjct: 191 EDLNKHVNDLAQQRQRLQA 209
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 33.9 bits (74), Expect = 0.14
Identities = 29/139 (20%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Frame = -2
Query: 437 SLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDL--NKLQQTSVFM 264
+L D ED+ +S + + L KL+ + E++QL + +++ K Q + +
Sbjct: 72 ALTDRLEDAEGTTDSQIESNRKREGELSKLR-KLLEESQLESEDAMNVLRKKHQDSCLDY 130
Query: 263 QEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKN 84
Q+++++++ + + + +Q + I + L D R + L+NK
Sbjct: 131 QDQIEQLQKKNAKIDRERQRVQHEVIELTATIDQLQKDKHTAEKAAERFEAQANELANKV 190
Query: 83 IELIKHKNLLQNEYTTLQS 27
+L KH N L + LQ+
Sbjct: 191 EDLNKHVNDLAQQRQRLQA 209
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 33.9 bits (74), Expect = 0.14
Identities = 29/139 (20%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Frame = -2
Query: 437 SLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDL--NKLQQTSVFM 264
+L D ED+ +S + + L KL+ + E++QL + +++ K Q + +
Sbjct: 88 ALTDRLEDAEGTTDSQIESNRKREGELSKLR-KLLEESQLESEDAMNVLRKKHQDSCLDY 146
Query: 263 QEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKN 84
Q+++++++ + + + +Q + I + L D R + L+NK
Sbjct: 147 QDQIEQLQKKNAKIDRERQRVQHEVIELTATIDQLQKDKHTAEKAAERFEAQANELANKV 206
Query: 83 IELIKHKNLLQNEYTTLQS 27
+L KH N L + LQ+
Sbjct: 207 EDLNKHVNDLAQQRQRLQA 225
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 33.9 bits (74), Expect = 0.14
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = -2
Query: 431 LDDAEDSNNAANSDDTMLSESQAILKKLQID-IAEQTQLNIKRQLDLNKLQQ--TSVFMQ 261
L D+ +DD + E+ A LKK D + ++ +K++ D +KL+Q + +
Sbjct: 7009 LKQEADAKLKKENDDKLKQEADAKLKKENDDKLKQEAAAKLKKEND-DKLKQEADAKLKK 7067
Query: 260 EKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNEN 105
E D++K + + + + +LK+ + K L+ NDD K A +A+L EN
Sbjct: 7068 ENDDKLKQEADAKLQKENDDKLKQEADAK-LQKENDDKLKQEA-DAKLQKEN 7117
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 33.9 bits (74), Expect = 0.14
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = -2
Query: 431 LDDAEDSNNAANSDDTMLSESQAILKKLQID-IAEQTQLNIKRQLDLNKLQQ--TSVFMQ 261
L D+ +DD + E+ A LKK D + ++ +K++ D +KL+Q + +
Sbjct: 7029 LKQEADAKLKKENDDKLKQEADAKLKKENDDKLKQEAAAKLKKEND-DKLKQEADAKLKK 7087
Query: 260 EKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNEN 105
E D++K + + + + +LK+ + K L+ NDD K A +A+L EN
Sbjct: 7088 ENDDKLKQEADAKLQKENDDKLKQEADAK-LQKENDDKLKQEA-DAKLQKEN 7137
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 33.9 bits (74), Expect = 0.14
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = -2
Query: 431 LDDAEDSNNAANSDDTMLSESQAILKKLQID-IAEQTQLNIKRQLDLNKLQQ--TSVFMQ 261
L D+ +DD + E+ A LKK D + ++ +K++ D +KL+Q + +
Sbjct: 7029 LKQEADAKLKKENDDKLKQEADAKLKKENDDKLKQEAAAKLKKEND-DKLKQEADAKLKK 7087
Query: 260 EKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNEN 105
E D++K + + + + +LK+ + K L+ NDD K A +A+L EN
Sbjct: 7088 ENDDKLKQEADAKLQKENDDKLKQEADAK-LQKENDDKLKQEA-DAKLQKEN 7137
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
Frame = -2
Query: 770 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXIPCP 591
+ FV L C+ C S+ + +F R + +C H LCS C CP
Sbjct: 22 LHFVSLVCSGCDSLGDRDRFFDNDKKRPCV------SSCNHSLCSQC-----FDKFTECP 70
Query: 590 LCRVESLHFNVYSINRNVVDVIKCSVTSVAQ--WNKINDNFDAAS 462
+C+ + Y R +V+ K + T + + WN + + S
Sbjct: 71 ICKEPLVRSENYQA-RKIVEHFKENPTMIIEKWWNSTANGSETCS 114
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 32.7 bits (71), Expect = 0.32
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Frame = -2
Query: 398 NSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDR--------I 243
N+ T S S K ++I+ E ++L I +++ L+++ V Q DR +
Sbjct: 217 NARTTHNSNSSRFGKFIRIEFDENSKL-IGAKIECYLLEKSRVVFQSDGDRNFHIFYQML 275
Query: 242 KNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNE 108
N ++N HKSF +L K+++ K L+ NDD A+ A++++E
Sbjct: 276 SNYFDNPHKSFLKLS-KKVNEYKYLR--NDDSMIDDAETAKMTDE 317
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -2
Query: 353 KLQIDIAEQTQLNIKRQLDLNKLQ-QTSVFMQEKLDRIKNDYNNMHKS---FKELQLKRI 186
KL + + + +K Q +L +++ Q + EK + M ++ F L+ K
Sbjct: 860 KLSMLLDREKSEKVKVQKELEEVEKQGREKLLEKEREFRKTMEEMEQNEEIFNVLERKYN 919
Query: 185 STEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQ 30
K + +ND + K +L+ E L N+N +L + +N + Y+ L+
Sbjct: 920 EQHKKVMKMNDVLREYERKIEQLNMEKTDLENENQKLRETQNRQDSHYSNLE 971
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/124 (17%), Positives = 54/124 (43%), Gaps = 4/124 (3%)
Frame = -2
Query: 389 DTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSF 210
D SE + K+L+ + + ++++ + K + +E + ++ YN HK
Sbjct: 866 DREKSEKVKVQKELEEVEKQGREKLLEKEREFRKTMEEMEQNEEIFNVLERKYNEQHKKV 925
Query: 209 KELQLKRISTEKALKSLNDDYAKLAAKNARL----SNENKVLSNKNIELIKHKNLLQNEY 42
++ E+ ++ LN + L +N +L + ++ SN E+++ +L+
Sbjct: 926 MKMNDVLREYERKIEQLNMEKTDLENENQKLRETQNRQDSHYSNLEKEVMEKSSLIDELQ 985
Query: 41 TTLQ 30
+Q
Sbjct: 986 NQIQ 989
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 32.7 bits (71), Expect = 0.32
Identities = 22/84 (26%), Positives = 42/84 (50%)
Frame = -2
Query: 428 DDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLD 249
D+ E+ NS+ + + + ++KLQ D + +L + D+ L++ QE L+
Sbjct: 179 DEIEELKKKVNSESSRATLADEAVQKLQTD---KDKLEEEYMNDMRDLKKALKDNQEGLE 235
Query: 248 RIKNDYNNMHKSFKELQLKRISTE 177
+I D N +EL+ K +S+E
Sbjct: 236 KIAKDVKNKEGEIEELK-KSVSSE 258
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 32.7 bits (71), Expect = 0.32
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Frame = -2
Query: 389 DTMLSESQAILKKLQI--------DIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKND 234
D++ S+++ I +KL+I D E QL+I + DL + VF++E++ +++N+
Sbjct: 205 DSLESKNKDIQRKLEIAKQTVEQKDGLENEQLSIAMK-DLADAKHKIVFLEERVSQLENE 263
Query: 233 YNNMHKSFKELQLKRIST--------EKALKSLNDDYAKLAAKN----ARLSNENKVLSN 90
+++S K ++ I+ + ++ L +D + A + A+ +
Sbjct: 264 AEKVNESKKAGNIEDIAALGSVLVQKDDVIQQLTNDIKRHEASHVEELAKWKLAVSAVEK 323
Query: 89 KNIELIKHKNLLQNEYTTLQSYKCITN 9
KN LI N L+N+ + Y+ I N
Sbjct: 324 KNKTLIGELNELKNQLESRNDYEAIKN 350
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 32.7 bits (71), Expect = 0.32
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Frame = -2
Query: 389 DTMLSESQAILKKLQI--------DIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKND 234
D++ S+++ I +KL+I D E QL+I + DL + VF++E++ +++N+
Sbjct: 205 DSLESKNKDIQRKLEIAKQTVEQKDGLENEQLSIAMK-DLADAKHKIVFLEERVSQLENE 263
Query: 233 YNNMHKSFKELQLKRIST--------EKALKSLNDDYAKLAAKN----ARLSNENKVLSN 90
+++S K ++ I+ + ++ L +D + A + A+ +
Sbjct: 264 AEKVNESKKAGNIEDIAALGSVLVQKDDVIQQLTNDIKRHEASHVEELAKWKLAVSAVEK 323
Query: 89 KNIELIKHKNLLQNEYTTLQSYKCITN 9
KN LI N L+N+ + Y+ I N
Sbjct: 324 KNKTLIGELNELKNQLESRNDYEAIKN 350
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 32.7 bits (71), Expect = 0.32
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Frame = -2
Query: 389 DTMLSESQAILKKLQI--------DIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKND 234
D++ S+++ I +KL+I D E QL+I + DL + VF++E++ +++N+
Sbjct: 205 DSLESKNKDIQRKLEIAKQTVEQKDGLENEQLSIAMK-DLADAKHKIVFLEERVSQLENE 263
Query: 233 YNNMHKSFKELQLKRIST--------EKALKSLNDDYAKLAAKN----ARLSNENKVLSN 90
+++S K ++ I+ + ++ L +D + A + A+ +
Sbjct: 264 AEKVNESKKAGNIEDIAALGSVLVQKDDVIQQLTNDIKRHEASHVEELAKWKLAVSAVEK 323
Query: 89 KNIELIKHKNLLQNEYTTLQSYKCITN 9
KN LI N L+N+ + Y+ I N
Sbjct: 324 KNKTLIGELNELKNQLESRNDYEAIKN 350
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 32.3 bits (70), Expect = 0.42
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Frame = -2
Query: 473 DAASL-ASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLD 297
D A L SV+ E+S + D L E K+ QI I + L + + +
Sbjct: 66 DKAGLNESVIIERS--NKVSTQETRIYRRDVTLLEDDLKQKESQIRILQNRCLRL--ETE 121
Query: 296 LNKLQQTSVFMQEKLD----RIKNDYNNMHKSFKELQLKR---ISTEKALKS----LNDD 150
K+Q T QE L RI+N + +HK EL K S + LK+ LN+
Sbjct: 122 KQKMQDTISGYQEDLKENEIRIENLNSRLHKLEDELSAKTHEIFSIGEELKNKTMKLNEK 181
Query: 149 YAKLAAKNARLSNENKVLSNK 87
++ K A +S+EN+ L K
Sbjct: 182 NSQFQTKLAEISSENRNLERK 202
Score = 31.1 bits (67), Expect = 0.97
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = -2
Query: 380 LSESQAILKKLQIDIAEQTQLNIKRQLDLN-KLQQTSVFMQEKLDRIKNDYNNMHKSFKE 204
+ E +A KKLQ I E+ + N + L+ N KL++ EK++ K ++++ ++ +
Sbjct: 544 IQEVKADNKKLQ-QILEEVRQNQSKVLEENVKLRKGMAEAIEKIEEFKRNWHSSREAGER 602
Query: 203 LQLK-RISTEKALK 165
LQL+ + + EK LK
Sbjct: 603 LQLEAKENEEKVLK 616
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 31.9 bits (69), Expect = 0.55
Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Frame = -2
Query: 374 ESQAILKKLQIDIAEQTQLNIKR---QLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKE 204
E +A+ KK ++ E+TQ KR + + +L+ + +L++ ++ + +
Sbjct: 858 EFEALEKKFKVLEEEKTQEERKRKDMEAENARLEAEKQALLIQLEQERDSSAEGEERSAK 917
Query: 203 LQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSY 24
L ++ EK + ++ND KNA L+ + K + N L K + L+ +S
Sbjct: 918 LLAQKADLEKQMANMNDQLCDEEEKNAALTKQKKKIEQDNEGLKKTVSDLETTIKKQESE 977
Query: 23 K 21
K
Sbjct: 978 K 978
Score = 28.7 bits (61), Expect = 5.1
Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Frame = -2
Query: 359 LKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNM--HKSFKELQLKRI 186
+ +L+I + +LN+ Q + KLQ T +Q +++ + + H + E + + +
Sbjct: 1632 VNELEIALDHSNKLNVDGQKSMKKLQDTIRELQYQVEEEQRSLSESRDHANLAERRSQVL 1691
Query: 185 STEKALKSLNDDYAKLAAKNARL-----SNENKVLSNKNIELIKHKNLLQNEYTTLQS 27
EK ++ + ++ + A L + LSN N L+ K ++ + LQS
Sbjct: 1692 QQEKEDLAIIYEQSERTRRQAELELAEVKDSVNELSNSNSLLLATKRKVEGDLQLLQS 1749
>U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical
protein C09B9.3 protein.
Length = 884
Score = 31.5 bits (68), Expect = 0.73
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Frame = -2
Query: 512 TSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIA 333
T VA+WNKI DN A+ + +DD +D+ +L +Q KK I +
Sbjct: 416 TIVARWNKIFDNMGFIESAAYAI-AAFMDD--------KNDEPILKPAQE--KKEIIKLE 464
Query: 332 EQTQLNIKRQLDLN-KLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLN 156
++T +++++ D N K ++ S Q K +K+ NM K K +K + +K L+ LN
Sbjct: 465 DRTD-SVEKESDKNTKNKKKSSGEQNK--TVKSGAENM-KILKPDAVKYVEKQKELEKLN 520
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 31.5 bits (68), Expect = 0.73
Identities = 25/108 (23%), Positives = 50/108 (46%)
Frame = -2
Query: 434 LLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEK 255
L +D E ++ + T + E Q +L I+ EQ N+K D QT ++EK
Sbjct: 579 LTNDEECISDELEAIGTAVEEEQERNAQLYIEKREQEDRNLKMMNDRMIQNQTFNRLREK 638
Query: 254 LDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSN 111
L +++ + K + ++ + E+ + L++ +A+ RL+N
Sbjct: 639 LSCLESKAQTDAQIAKMHEFEKKANEELVTKLSESVQFKSAELTRLTN 686
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 31.5 bits (68), Expect = 0.73
Identities = 25/108 (23%), Positives = 50/108 (46%)
Frame = -2
Query: 434 LLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEK 255
L +D E ++ + T + E Q +L I+ EQ N+K D QT ++EK
Sbjct: 582 LTNDEECISDELEAIGTAVEEEQERNAQLYIEKREQEDRNLKMMNDRMIQNQTFNRLREK 641
Query: 254 LDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSN 111
L +++ + K + ++ + E+ + L++ +A+ RL+N
Sbjct: 642 LSCLESKAQTDAQIAKMHEFEKKANEELVTKLSESVQFKSAELTRLTN 689
>CU457741-9|CAM36350.2| 252|Caenorhabditis elegans Hypothetical
protein C42C1.9 protein.
Length = 252
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/108 (20%), Positives = 52/108 (48%)
Frame = -2
Query: 350 LQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKA 171
L+ +++ + LN +D +++ + F+ L R K N + + ++TEK+
Sbjct: 38 LECNMSNRESLNESLFMDYDQISEDYDFVTYALLREKRSSKNNNMKTSHVITSTLNTEKS 97
Query: 170 LKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQS 27
L++ D+Y K + + + ++N ++L H N + + TL++
Sbjct: 98 LETYLDEYGKFPLPDWMTAVIVRDIANALLQL--HSNQVLHGAVTLEN 143
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 31.1 bits (67), Expect = 0.97
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Frame = -2
Query: 362 ILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRIS 183
+ K L E T ++ L++ + ++EKL++ KND + EL ++++
Sbjct: 175 VTKDLHDKNEELTSFRMEYVTKLSEANREKKALEEKLEKYKNDMKENDRKSLELNKEQVT 234
Query: 182 TEKALK-----SLNDDYAKLAAKNA---RLSNENKVLSNKNIELIKHKNLLQNEYTT 36
T+ L S + ++ KNA R +E LS K IE + ++NE T
Sbjct: 235 TQNVLSEVRQLSAHFEFLTPVRKNASKIRELDEYHQLSAKVIEESMNDLKIKNETLT 291
>U80836-4|AAB37891.2| 329|Caenorhabditis elegans Hypothetical
protein B0432.6 protein.
Length = 329
Score = 30.3 bits (65), Expect = 1.7
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Frame = -2
Query: 473 DAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDL 294
+ A L + L E SL + + + A N + +E + ++++ +AE +L K++ +
Sbjct: 165 EKAGLKTQLTE-SLQNAERNVHTAQNEISKLNTELAQSVTRIELFLAENREL--KQEFE- 220
Query: 293 NKLQQTSVFMQE--KLD-RIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNA 123
K+ + V + ++D +KN ++M ++ ++ K L + L +
Sbjct: 221 EKVVECEVLKEHIRQIDLELKNKQSDMERALLQISAAEQKAAKKELELIEAEKHLKLYES 280
Query: 122 RLSNENKVLSNKNIELIKHKNLLQNEYTTLQSYKCITNA 6
RLS+ + L+ KN+E+ + K L LQ + + A
Sbjct: 281 RLSDRERDLNAKNLEIDRLKLDLDAARRNLQKLEQMREA 319
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/88 (25%), Positives = 49/88 (55%)
Frame = -2
Query: 389 DTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSF 210
+ +L+E Q + K+L + E+ +L ++ + KL + Q++++R+K+D N++
Sbjct: 12 NALLAEKQELRKQLDREQNEKQELFMQINSMIAKLADSGD--QDEINRLKSDVNSLK--- 66
Query: 209 KELQLKRISTEKALKSLNDDYAKLAAKN 126
+EL+ ++I++ L + K AKN
Sbjct: 67 RELEAEKIASNAEAARLKSELQK--AKN 92
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/88 (25%), Positives = 49/88 (55%)
Frame = -2
Query: 389 DTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSF 210
+ +L+E Q + K+L + E+ +L ++ + KL + Q++++R+K+D N++
Sbjct: 12 NALLAEKQELRKQLDREQNEKQELFMQINSMIAKLADSGD--QDEINRLKSDVNSLK--- 66
Query: 209 KELQLKRISTEKALKSLNDDYAKLAAKN 126
+EL+ ++I++ L + K AKN
Sbjct: 67 RELEAEKIASNAEAARLKSELQK--AKN 92
>AL034393-9|CAA22314.1| 248|Caenorhabditis elegans Hypothetical
protein Y18D10A.11 protein.
Length = 248
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = -2
Query: 362 ILKKLQIDIAEQTQLNIKRQLDLNKL-QQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRI 186
+L +L+ +AE+T N+K Q D ++ ++ + + DRI + L++ +
Sbjct: 16 LLDELKRRVAEKTAQNVKLQQDAEEISKKLDAALSPRKDRIT-------QLESRLEVVQQ 68
Query: 185 STEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELI 72
+ + K + A A+N +LS E L +N EL+
Sbjct: 69 AAKAQQKRWEGELASSRAQNEQLSEEKSQLQKENEELL 106
>AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical
protein F40G9.14 protein.
Length = 261
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/81 (25%), Positives = 31/81 (38%)
Frame = -2
Query: 767 EFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXIPCPL 588
E+V +C ICF E+ P + C H C C I CP
Sbjct: 132 EYVDDECKICFEKYEVTGN-RSP----------RVFNCGHTYCESCIQVCKHQFQIKCPF 180
Query: 587 CRVESLHFNVYSINRNVVDVI 525
C S N +S N+ +++V+
Sbjct: 181 CTTTSYQIN-FSTNKLILEVL 200
>Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical
protein C55A6.1 protein.
Length = 228
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = -2
Query: 701 PIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXIPCPLCRVESLHFNVYSINRNVVDV 528
PI + +I + C H+ C +C CP+CR + N+++ V+D+
Sbjct: 13 PICQCKMIVPTTIPACGHKFCFICLKGVYMNDMGGCPMCR-GPIDSNIFAQPSQVLDL 69
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 29.9 bits (64), Expect = 2.2
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 25/156 (16%)
Frame = -2
Query: 440 KSLLDDAEDSNNAANSDDTML---SESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSV 270
K L +AE+S + N DD +E + + K L+I+I+ + +K Q ++ L+Q +
Sbjct: 1591 KQKLVEAENSASGWNDDDAWNKNENEIEEVKKALEIEISNRNDTIVKLQNLVSNLRQQLI 1650
Query: 269 FMQEKLD--------------RIKNDYNNMHKSFKELQLKR-----ISTEKALKSLNDDY 147
E D RI ++ N + K + L + +K +
Sbjct: 1651 EASESADLKSLEELEQLKEELRIVSEQNGLLKDSEARLLDHADEFAVQMDKYREKCEVLT 1710
Query: 146 AKLAAKNARLSN---ENKVLSNKNIELIKHKNLLQN 48
AK+A A+L N E++ N+EL+K + L N
Sbjct: 1711 AKIAELEAQLQNPAEEDQQQKTSNVELVKLRQQLAN 1746
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = -2
Query: 302 LDLNKLQQTS--VFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAK 129
LD+ L QT+ V +KL +I + N+H KEL + S K L+ + YA+L +
Sbjct: 115 LDVPTLSQTNRGVSSNQKLIQILRE-ENVHLK-KELDAFKRSLSK-LQQIEYSYARLEKE 171
Query: 128 NARLSNENKVLSNKNIELI 72
L+NE K N + +I
Sbjct: 172 YEYLANERKKQENLELNVI 190
>AF068709-15|AAC19246.2| 317|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 62 protein.
Length = 317
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -2
Query: 371 SQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNN 225
S AIL ++++A +++NIK++L L + V+ E + + N N+
Sbjct: 207 STAILASKKVEVASSSKMNIKKKLTKISLTYSVVYTAEVIWSVLNSLNS 255
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -2
Query: 194 KRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSY 24
KR E + L + K+ K ++NK + N+N KH L+QNE +T +Y
Sbjct: 83 KRKHVEVTTQKLENKKPKVEVKKEDEKSKNKKMKNQN----KHTALVQNETSTRSTY 135
>Z71259-4|CAA95788.2| 501|Caenorhabditis elegans Hypothetical
protein F13G3.3 protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -2
Query: 197 LKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIK 69
LK I LKS N++ K L N+ ++SNKNI++I+
Sbjct: 360 LKHIELLDGLKSKNEEEPKYNPSTG-LDNDKPLISNKNIKMIE 401
>Z50110-3|CAA90445.2| 459|Caenorhabditis elegans Hypothetical
protein F18H3.4 protein.
Length = 459
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/116 (21%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Frame = -2
Query: 410 NNAANSDDTMLSESQAIL--KKLQIDIAEQT--QLNIKRQLDLNKLQQTSVFM-----QE 258
N +A + +++E A+ KKL +AE T + + ++L+ N++Q+ V+ Q
Sbjct: 123 NLSARDEQALVTEIDALKRNKKLLESLAEITSHRKGMDQELEKNRIQKHKVYFELTSCQN 182
Query: 257 KLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSN 90
+ ++K + ++ ++L+ + KSL Y + N+NK+ N
Sbjct: 183 RFKQMKQERRHIEDEIRDLKHQLQGANSRRKSLISTYEDDREEYKNWLNDNKLNGN 238
>AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical
protein B0281.3 protein.
Length = 331
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -2
Query: 656 CKHQLCSMCXXXXXXXXXIPCPLCR--VESLHFNVYSINRN--VVDVIKCSVTSVAQ 498
C H LC C I CP CR E N+ S+++N ++ VIK ++ A+
Sbjct: 57 CCHTLCEGCIKKLLNYSRIVCPFCREPTEVPGNNIKSLHKNFSLIQVIKTTLVEEAE 113
>Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical
protein K08E3.3b protein.
Length = 610
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/87 (21%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = -2
Query: 320 LNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEK--ALKSLNDDY 147
+N K + +N++ ++ + +N Y +K+ K L++ R+ EK AL + ++
Sbjct: 126 INDKLEDQINEMCKSGKCYLKSFKDAENSYQKFYKADKNLEISRLELEKARALANARNEA 185
Query: 146 AKLAAK--NARLSNENKVLSNKNIELI 72
+LA + +A + N ++EL+
Sbjct: 186 CELAKQDYSALVRKTNAEQKRYHVELL 212
>Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical
protein K08E3.3a protein.
Length = 608
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/87 (21%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = -2
Query: 320 LNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEK--ALKSLNDDY 147
+N K + +N++ ++ + +N Y +K+ K L++ R+ EK AL + ++
Sbjct: 126 INDKLEDQINEMCKSGKCYLKSFKDAENSYQKFYKADKNLEISRLELEKARALANARNEA 185
Query: 146 AKLAAK--NARLSNENKVLSNKNIELI 72
+LA + +A + N ++EL+
Sbjct: 186 CELAKQDYSALVRKTNAEQKRYHVELL 212
>Z81097-14|CAB03171.2| 221|Caenorhabditis elegans Hypothetical
protein K07A1.10 protein.
Length = 221
Score = 28.7 bits (61), Expect = 5.1
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -2
Query: 263 QEKLDRIKNDYNNMHKSFKELQLKRISTEKAL-----KSLNDDYAKLAAKNARLSNENKV 99
+E+ + ++NN K +KELQ K+ +E A K+L A LA A L + +
Sbjct: 98 EEEAIGLFREFNNAKKEYKELQKKKRESELARIAELEKNLKKYPATLAKYEASLVKQEQE 157
Query: 98 LSNKNIELIKHKNLLQNEY 42
K + L K +Q EY
Sbjct: 158 KDEKEVALEKRIRDIQ-EY 175
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = -2
Query: 281 QTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENK 102
+T M+ +++ ++ +++ +EL+ K L+ +DD KL +A L N+
Sbjct: 480 ETKNLMKNEIESLRQTFSDAKIRIRELEEDANIFRKDLEKADDDRLKL---DAALKEANE 536
Query: 101 VLSNKNIELI---KHKNLLQNE 45
+ +K E++ N LQNE
Sbjct: 537 EIDSKAAEIVASLNTANRLQNE 558
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = -2
Query: 281 QTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENK 102
+T M+ +++ ++ +++ +EL+ K L+ +DD KL +A L N+
Sbjct: 480 ETKNLMKNEIESLRQTFSDAKIRIRELEEDANIFRKDLEKADDDRLKL---DAALKEANE 536
Query: 101 VLSNKNIELI---KHKNLLQNE 45
+ +K E++ N LQNE
Sbjct: 537 EIDSKAAEIVASLNTANRLQNE 558
>AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical
protein F42G2.5 protein.
Length = 374
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 656 CKHQLCSMCXXXXXXXXXIPCPLCRVESLHFNVYSINRN 540
C H +C C I CP CR E+ +V S+ +N
Sbjct: 155 CGHSICQSCASKLAKNCVILCPFCRNETNVSSVASLPKN 193
>AC017117-1|AAF16618.1| 338|Caenorhabditis elegans Hypothetical
protein F43C11.8 protein.
Length = 338
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Frame = -2
Query: 770 MEFVKLQ-CNICFSVAEIKNYFMQPIDRLTIIPVLELDT----CKHQLCSMCXXXXXXXX 606
M F++ + CN FS A +N + + +L ++P L+L C H +C C
Sbjct: 1 MSFIECEICNEDFSSATDEN-IPRILSKL-LLPFLKLKNKNSGCGHTICHGCAEKLLQNS 58
Query: 605 XIPCPLCRVESLHFNVYSINRN 540
I CP CR + V + +N
Sbjct: 59 MILCPFCREATNVSTVKDLQKN 80
>Z81066-3|CAI46608.1| 363|Caenorhabditis elegans Hypothetical
protein F17B5.6 protein.
Length = 363
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -2
Query: 467 ASLASVLFEK-SLLDDAEDSNNAA--NSDDTMLSESQAILKKLQIDIAEQ 327
+ L + LFE SLL AE N A N DDTML+E + ++ +AE+
Sbjct: 71 SGLGNQLFEVVSLLGMAEVLNRTAIFNKDDTMLNEKLSFFRETVPRVAEK 120
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 299 DLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNAR 120
DL K Q + +++ D +KND N K+ +++ K + + L DD KL A +
Sbjct: 3168 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 3227
Query: 119 LS 114
L+
Sbjct: 3228 LT 3229
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 299 DLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNAR 120
DL K Q + +++ D +KND N K+ +++ K + + L DD KL A +
Sbjct: 5025 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 5084
Query: 119 LS 114
L+
Sbjct: 5085 LT 5086
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 299 DLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNAR 120
DL K Q + +++ D +KND N K+ +++ K + + L DD KL A +
Sbjct: 5928 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 5987
Query: 119 LS 114
L+
Sbjct: 5988 LT 5989
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 299 DLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNAR 120
DL K Q + +++ D +KND N K+ +++ K + + L DD KL A +
Sbjct: 6831 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 6890
Query: 119 LS 114
L+
Sbjct: 6891 LT 6892
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 299 DLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNAR 120
DL K Q + +++ D +KND N K+ +++ K + + L DD KL A +
Sbjct: 7734 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 7793
Query: 119 LS 114
L+
Sbjct: 7794 LT 7795
>Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical
protein F31D4.5 protein.
Length = 488
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/80 (21%), Positives = 35/80 (43%)
Frame = -2
Query: 248 RIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIK 69
++K+D N+ K + + E+ SLN L A L+ E + + + E+++
Sbjct: 263 KLKDDLQNVKNELKMTNEMKKTLEQEKMSLNSKTEHLQANMESLNIEKEKIHEQLQEIVR 322
Query: 68 HKNLLQNEYTTLQSYKCITN 9
+ + + L + KC N
Sbjct: 323 EREKVLIDNQNLSTDKCQLN 342
>U80450-6|AAB37831.1| 544|Caenorhabditis elegans Hypothetical
protein M01E11.2 protein.
Length = 544
Score = 27.9 bits (59), Expect = 9.0
Identities = 26/120 (21%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Frame = -2
Query: 542 NVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQA 363
+V ++IK S +S+ Q + FD ++ +S + +D + A S+ L + Q
Sbjct: 5 DVTEIIKSSTSSLYQPARKKSRFDDSASSSSQAGQPKPEDILAALEADQSNYVALDDVQ- 63
Query: 362 ILKKLQIDIAEQTQLN----IKRQLDLNKLQQTSVFMQEKLDRIKN--DYNNMHKSFKEL 201
+KKL I + ++ +LN +K D K ++ + + + + + + +++ SF E+
Sbjct: 64 -VKKLVIQLDKKMRLNREQRVKNPDDAQKFMESEIELDKAIQEMHSLASQPDLYGSFVEV 122
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 27.9 bits (59), Expect = 9.0
Identities = 26/119 (21%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Frame = -2
Query: 392 DDTMLSESQAILKKLQIDIAEQTQL---NIKRQLDL--NKLQQTSVF---MQEKLDRIKN 237
DD + +A+ + D +Q Q+ N++R + + +K+ VF ++EKLD++K+
Sbjct: 306 DDVLTLIDKAVEDNARSDQVKQQQIQITNLERTIRVLNDKINCNDVFRSDVEEKLDKLKD 365
Query: 236 DYNNMHKSF--KELQLKRISTEKAL-KSLNDDYAKLAAKNARLSNENKVLSNKNIELIK 69
D ++ + ++ ++ RI L KS ++ + + R + E ++ IE +
Sbjct: 366 DISSREREINAQKEEVNRIKDSLRLEKSKRNELEEEVLRQRRCAQEEIESRDQEIEAFR 424
>AL132904-25|CAB81956.2| 434|Caenorhabditis elegans Hypothetical
protein Y111B2A.5a protein.
Length = 434
Score = 27.9 bits (59), Expect = 9.0
Identities = 28/144 (19%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Frame = -2
Query: 578 ESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAA 399
E LH ++ R V C +AQ N + ++ S A +K +L A
Sbjct: 130 EKLHIETRNLEREVDLRQNCVDEMIAQTNTLQMQQESMSTAMKTLQKQIL---------A 180
Query: 398 NSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLD--RIKNDYNN 225
N + E + +L+ +E+ N++ + ++++ + D +N+ ++
Sbjct: 181 NEREICQLEEKLTESELKTQRSEEKVKNLEDFIVGERMEEAEAEAEAAADGGGARNEVSH 240
Query: 224 MHKSFKELQLKRISTEKALKSLND 153
+ + +LQ K + E+ LK L +
Sbjct: 241 LKRYIADLQSKLSTMEEELKVLRE 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,778,099
Number of Sequences: 27780
Number of extensions: 290688
Number of successful extensions: 1244
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1239
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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