Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12k15
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 42 8e-04
Z84712-1|CAB06545.1| 297|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z78419-8|CAB01706.1| 297|Caenorhabditis elegans Hypothetical pr... 33 0.27
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 32 0.62
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 31 0.83
Z93239-2|CAB07529.2| 1218|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z69660-2|CAD57697.1| 1218|Caenorhabditis elegans Hypothetical pr... 31 1.1
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa... 31 1.1
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as... 31 1.1
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 31 1.4
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 29 3.3
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 29 3.3
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 29 3.3
U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical pr... 29 4.4
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 29 4.4
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr... 29 5.8
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 29 5.8
AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical ... 29 5.8
AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily a... 29 5.8
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p... 28 7.7
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 28 7.7
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical protein
R07E5.1 protein.
Length = 812
Score = 41.5 bits (93), Expect = 8e-04
Identities = 54/260 (20%), Positives = 106/260 (40%), Gaps = 11/260 (4%)
Frame = -2
Query: 785 GLATSEQIEAAKGGLYGAVTRVEIQWRPEALVCKRFNVPQP-GGINTEEKHQERPKISYS 609
G +++ A K ++G TR W P+ L+ KRFNVP P G +T
Sbjct: 504 GTKDEDKLAAVKMEMFGEKTRQSFDWYPDNLLAKRFNVPHPYPGSDT-----------VG 552
Query: 608 VFSYMESSVHDRDSFAKEQVAFSGSKSLNREPVKIDTRPVSVTSTSNKTELVGAPKRMTV 429
V + ++ +D A + S + L +I+ R + S + + KR
Sbjct: 553 VPALQKTDWKRKDRLA-DIGGVSATLGLPNTANEIEMRERLLKSRAQRG--AEEKKRNQS 609
Query: 428 AELFLKESEQNKNEGVQVTETINKFDKIDLYKSIFL------SDSEDEDVGQTKNNDRDF 267
+ KE + ++ + E K+D F D D D +++ + +
Sbjct: 610 DDDDEKEYDDKDSDEEEENEAEPNNQKVDKAPKSFFDFIFGDGDGADSDESNSEDEEAEE 669
Query: 266 ADAPKNLERNNSPPRGIFANIDFHEINSWKRPDKDVQEQKPKDADGQPKVDKVENVPAPD 87
+ + L++ + ++ E + KR +K+++E + +D K + +++ D
Sbjct: 670 KERQEILKKREEDLKRRREIVEKKEEENRKRVEKELKELENRDLLRVSKQQEDDDIQIID 729
Query: 86 ET----YGPKIPDNFKPNLA 39
ET +GP +P + KP L+
Sbjct: 730 ETSASSFGPALPPSSKPVLS 749
>Z84712-1|CAB06545.1| 297|Caenorhabditis elegans Hypothetical
protein F26A3.7 protein.
Length = 297
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2
Query: 167 KDVQEQKPKDADGQPKVDKVENVPAPDETYGPKIPDNFKPNL 42
K+V+E K ++ + P D E+ P ++YGP IP NF+P +
Sbjct: 65 KEVRE-KLQNVEN-PAEDDEEDEEFPSQSYGPSIPSNFRPTV 104
>Z78419-8|CAB01706.1| 297|Caenorhabditis elegans Hypothetical
protein F26A3.7 protein.
Length = 297
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2
Query: 167 KDVQEQKPKDADGQPKVDKVENVPAPDETYGPKIPDNFKPNL 42
K+V+E K ++ + P D E+ P ++YGP IP NF+P +
Sbjct: 65 KEVRE-KLQNVEN-PAEDDEEDEEFPSQSYGPSIPSNFRPTV 104
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 33.1 bits (72), Expect = 0.27
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 6/139 (4%)
Frame = -2
Query: 455 VGAPKRMTVAELFLKESEQNKN--EGVQVTETINKFDKIDLY---KSI-FLSDSEDEDVG 294
V A K+ +V E E+E++ + + TE I+ F + + + L D+ ED
Sbjct: 347 VSAIKKSSVEETKTFETEKSPEVQKATEPTEKIDNFQSTPVTAVPRGVPNLVDTSSEDEE 406
Query: 293 QTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKRPDKDVQEQKPKDADGQPKVD 114
+ + K E P + + ++I +IN + D + ++ K+ D +P
Sbjct: 407 EDVEIIKPIEQPEKASEVLVEPIKKVVSSI---KINGIEVKDVEKTKEDKKEVDSKPVAT 463
Query: 113 KVENVPAPDETYGPKIPDN 57
+++VP P + K+P+N
Sbjct: 464 NIQDVPTPIPSETSKVPEN 482
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 31.9 bits (69), Expect = 0.62
Identities = 20/98 (20%), Positives = 41/98 (41%)
Frame = -2
Query: 521 REPVKIDTRPVSVTSTSNKTELVGAPKRMTVAELFLKESEQNKNEGVQVTETINKFDKID 342
+ P T+ + T+ T P T L E+E+ + + ++V ++++ ++ID
Sbjct: 343 KAPTTTTTQSTTTTTQLPTTTTTTEPTTTTTTVDPLAENEELEKQAIEVMKSLDDEERID 402
Query: 341 LYKSIFLSDSEDEDVGQTKNNDRDFADAPKNLERNNSP 228
K++ + +DE K + K E N P
Sbjct: 403 AEKNVEVQKRKDERNAARKRINNFLKMMQKARENKNKP 440
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -2
Query: 305 EDVGQTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEI---NSWKRPDK-DVQEQKPK 141
+++GQ D D +N E +NSP IF + NS KRP V E+KPK
Sbjct: 137 DEMGQLGEEDDDLMCKDENRENSNSPELDIFHDYSKEASPTRNSTKRPSTVSVHERKPK 195
>Z93239-2|CAB07529.2| 1218|Caenorhabditis elegans Hypothetical
protein H03A11.2 protein.
Length = 1218
Score = 31.1 bits (67), Expect = 1.1
Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 6/159 (3%)
Frame = -2
Query: 476 TSNKTELVGAPKRMTVAELFLKESEQNKNEGVQVTETINKFDKIDLYKSIFLSDSEDEDV 297
+ ++ L GA K +++ E + ++N QV E +L + S D
Sbjct: 160 SKRQSTLTGAKKTVSINEQITGYQKTHRNSS-QVFEARRLHQIAELKDNSNSGTSIDNAK 218
Query: 296 GQTK-----NNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKRPD-KDVQEQKPKDA 135
QT+ N++ N+ RN SP N F E + + K+ + P+D
Sbjct: 219 VQTRAEKNGTNNQQHKLIEVNVNRNYSPRNNSQINELFKESGADRATSSKNTSNKTPQDN 278
Query: 134 DGQPKVDKVENVPAPDETYGPKIPDNFKPNLASQTCKQD 18
PK K + V A D + K N+A T Q+
Sbjct: 279 INSPKYSKKQAVKAHDRHSATHREIHGKQNMAHTTQNQE 317
>Z69660-2|CAD57697.1| 1218|Caenorhabditis elegans Hypothetical
protein H03A11.2 protein.
Length = 1218
Score = 31.1 bits (67), Expect = 1.1
Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 6/159 (3%)
Frame = -2
Query: 476 TSNKTELVGAPKRMTVAELFLKESEQNKNEGVQVTETINKFDKIDLYKSIFLSDSEDEDV 297
+ ++ L GA K +++ E + ++N QV E +L + S D
Sbjct: 160 SKRQSTLTGAKKTVSINEQITGYQKTHRNSS-QVFEARRLHQIAELKDNSNSGTSIDNAK 218
Query: 296 GQTK-----NNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKRPD-KDVQEQKPKDA 135
QT+ N++ N+ RN SP N F E + + K+ + P+D
Sbjct: 219 VQTRAEKNGTNNQQHKLIEVNVNRNYSPRNNSQINELFKESGADRATSSKNTSNKTPQDN 278
Query: 134 DGQPKVDKVENVPAPDETYGPKIPDNFKPNLASQTCKQD 18
PK K + V A D + K N+A T Q+
Sbjct: 279 INSPKYSKKQAVKAHDRHSATHREIHGKQNMAHTTQNQE 317
>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
protein kinase protein.
Length = 1425
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = -1
Query: 654 QYRRKTSRATEDFLLRLFVHGVFSTRQRQLRERTSRVQWVKIAESGACQN*H*TCLCYVN 475
+Y + TS+ +DF+ RLFV V QR E + W++ E A +C+ +
Sbjct: 253 RYFKNTSKHAKDFIYRLFVRDV---DQRATVEECLQHPWIRGPEGNAIDIRKASCITISH 309
Query: 474 VK*NGTRRRTQK 439
++ TR+R ++
Sbjct: 310 IQSFKTRQRWKR 321
>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
(death-associated protein)kinase homolog protein 1
protein.
Length = 1425
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = -1
Query: 654 QYRRKTSRATEDFLLRLFVHGVFSTRQRQLRERTSRVQWVKIAESGACQN*H*TCLCYVN 475
+Y + TS+ +DF+ RLFV V QR E + W++ E A +C+ +
Sbjct: 253 RYFKNTSKHAKDFIYRLFVRDV---DQRATVEECLQHPWIRGPEGNAIDIRKASCITISH 309
Query: 474 VK*NGTRRRTQK 439
++ TR+R ++
Sbjct: 310 IQSFKTRQRWKR 321
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -2
Query: 260 APKNLERNNSPPRGIFANIDFH-EINSWKRPDKDVQEQKPKDADGQPKVDKVENV-PAPD 87
AP+ R PP + + H ++ + +P + + KP DA +P+V E V P P
Sbjct: 557 APQEPRRATPPPEPLRNELPKHSDLLNVSKPSEPAEPPKPSDAPREPEVAAAEAVIPEPS 616
Query: 86 ETYGPKIPDNFKPNLAS 36
+ P + AS
Sbjct: 617 PAVSVEEPPRREERAAS 633
>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/132 (21%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Frame = -2
Query: 470 NKTELVGAPKRMTVAELFLKE--SEQNKNEGVQVTETI---NKFDKIDLYKSIFLSDSED 306
N +E +P E F K+ S ++ + + E+I N +K + + + D ++
Sbjct: 107 NDSEKSESPIEEGEGETFEKKIISMDTSDDKLDIAESISVSNDTEKPEENEEKVVGDEDE 166
Query: 305 EDVGQTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKRPDKDVQEQKPKDADGQ 126
ED+ + +D D +APK + + D HE +S K ++++P++ D
Sbjct: 167 EDIDDVQEDDED--EAPK---KKTKKAVSTSDDDDLHEDDSPKGGSVSDEKEEPENEDDT 221
Query: 125 PKVDKVENVPAP 90
+ + V +P
Sbjct: 222 EEPENEVEVESP 233
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = -2
Query: 407 SEQNKNEGVQVTETINKFDKIDLYKSIFLSDSEDEDVGQTKNNDRDFADAPKNLERNNSP 228
S +N E T N F+ + + I+L S DE+ + + D+P + E++ P
Sbjct: 347 SNENGKETTPFEMTKNPFNDLKTIRPIYLGSSSDEEDDEPLEDISKATDSPHSSEKSQIP 406
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -3
Query: 700 KRSCARDLTFPNPAASIQKKNIKSDRRFLTPSFRTWSLQYTTETASRKNKSRSVGQNR 527
K+ RDL FPN S +K S+ T S S+ + +E SR+ +S S+ ++R
Sbjct: 81 KKKRWRDLLFPNSRHSSRKDKENSNVSVATRSLS--SVSFRSEKPSRRRESGSLSRHR 136
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -3
Query: 700 KRSCARDLTFPNPAASIQKKNIKSDRRFLTPSFRTWSLQYTTETASRKNKSRSVGQNR 527
K+ RDL FPN S +K S+ T S S+ + +E SR+ +S S+ ++R
Sbjct: 81 KKKRWRDLLFPNSRHSSRKDKENSNVSVATRSLS--SVSFRSEKPSRRRESGSLSRHR 136
>U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical
protein C01F1.3a protein.
Length = 631
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 63 RYFRSVSFVGSRNILDFIDFRLTVRIFGLLFLDIFIWSLPRVYFVEIDISENTTGR 230
R + + N+L FI F TVR +G + + I S VY + D+SEN G+
Sbjct: 95 RCYNETAEAVQNNVLSFIQFLETVRTYGKIKRFVHI-STDEVY-GDSDLSENEQGK 148
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 164 DVQEQKPKDADGQPKVDKVENVPAPDETYGPKIPDNFKPNLASQTCK 24
+V ++ P D+ P V+ +E P PD + P+ D F L + K
Sbjct: 745 EVDKKGPSDSKLAPVVENLEANPPPDPSSSPQFLDAFDRGLIKRQSK 791
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 164 DVQEQKPKDADGQPKVDKVENVPAPDETYGPKIPDNFKPNLASQTCK 24
+V ++ P D+ P V+ +E P PD + P+ D F L + K
Sbjct: 745 EVDKKGPSDSKLAPVVENLEANPPPDPSSSPQFLDAFDRGLIKRQSK 791
>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical protein
F21G4.6 protein.
Length = 1885
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +1
Query: 370 SVTWTPSFLFCSDSFKNNSATVILLGAPTSSVLFDVDVTETGLVSILTGSRFSDFDPL 543
++ W F C F N AT +L SS+L + V E+ L LTG+ D D L
Sbjct: 1025 AIDWKRYFEHCFSKFNNTKATHLLSKYADSSLLPN-RVEESDLDEELTGNDSVDIDNL 1081
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = -2
Query: 647 EEKHQERPKISYSVFSYMESSVHDRDSFAKEQVAFSGSKSLNREPVKIDTRPVSVTSTSN 468
E K + R S S S SS S ++ + S +S +R P + DTRP + S
Sbjct: 6 ETKKRARSSSSSSSSSSGSSSSGSSSSGSRSSSSSSSGRSRSRSPRRRDTRPPARGGRSR 65
Query: 467 KTELVGAPKR 438
G+P R
Sbjct: 66 SPIRRGSPPR 75
>AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical
protein Y71G12A.2 protein.
Length = 611
Score = 28.7 bits (61), Expect = 5.8
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Frame = -2
Query: 662 GGINTEEKHQERPKISYSVFSYMESSVHDRDSFAKEQVAFSGSKSLNREPVKIDTRPVSV 483
G +N +H+ I+Y +F+Y+ SS +S Q + L P++ T +
Sbjct: 502 GSLNHANRHRFVWNITYKLFNYLRSS----NSKCPLQKLSINRQMLKTLPIQASTAQMLK 557
Query: 482 TSTSNKTELVGAPKRMTVAELFLKESEQNKNEGV--QVTETINKFDKID 342
+ S E M F+ + E K+E + + E + K +ID
Sbjct: 558 SLCSELLESDSTTDEMLTLIFFIVQCENGKDEKIVENLMEKMRKRAEID 606
>AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily
assigned gene nameprotein 63 protein.
Length = 604
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 675 RSPTRRHQYRRKTSR-ATEDFLLRLFVHGVFSTRQRQLRERTSRVQ 541
++PT+RH ++R SR A E FL + + QR E+ +Q
Sbjct: 6 QAPTKRHSFKRMESREADESFLDEEEIERIKEELQRVQNEKKKHIQ 51
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein
Y37A1B.17a protein.
Length = 1538
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = -2
Query: 863 DRFTHASEPDDALNPLTAVARSSTGYGLATSEQIEAAKGGLYGAVTRVEIQWRPEALVCK 684
D+ + S A+ P+ + + S Q+E +G + G + R + PE L+ K
Sbjct: 1447 DQLPNESPASTAIRPVLCQVKVDYDFLPQGSNQVEVKEGEVIGVLQRTDDDGNPEWLLIK 1506
Query: 683 R 681
R
Sbjct: 1507 R 1507
>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical protein
T11G6.5 protein.
Length = 1406
Score = 28.3 bits (60), Expect = 7.7
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 5/148 (3%)
Frame = -2
Query: 518 EPVKIDTRPVSVTSTSNKTELVGAPKRMTVAELFLKESEQNKNEGVQVTETINKFDKIDL 339
EP K + +P ++ +V P + T+ L+ S ++ V + E + K +K++
Sbjct: 771 EPSK-EVKPAPQEEENDILRMVFTPSQPTL----LQSSLESLKNSVSLMELLQKKEKMNP 825
Query: 338 YKSIFLSDSEDEDVGQTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKR---PD 168
+ + D + + PK+ N N++ S K D
Sbjct: 826 IVTTTSLPELNTDSAPQSSQIKFSLSKPKSTANTNVLIEDDDDNVEKVIDESTKAGCSQD 885
Query: 167 KDVQEQKPKDADGQPK--VDKVENVPAP 90
D + PKD D +PK D+ +N+P P
Sbjct: 886 VDYRTSAPKDRDDRPKDIDDRFDNIPLP 913
>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 28.3 bits (60), Expect = 7.7
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 5/148 (3%)
Frame = -2
Query: 518 EPVKIDTRPVSVTSTSNKTELVGAPKRMTVAELFLKESEQNKNEGVQVTETINKFDKIDL 339
EP K + +P ++ +V P + T+ L+ S ++ V + E + K +K++
Sbjct: 771 EPSK-EVKPAPQEEENDILRMVFTPSQPTL----LQSSLESLKNSVSLMELLQKKEKMNP 825
Query: 338 YKSIFLSDSEDEDVGQTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKR---PD 168
+ + D + + PK+ N N++ S K D
Sbjct: 826 IVTTTSLPELNTDSAPQSSQIKFSLSKPKSTANTNVLIEDDDDNVEKVIDESTKAGCSQD 885
Query: 167 KDVQEQKPKDADGQPK--VDKVENVPAP 90
D + PKD D +PK D+ +N+P P
Sbjct: 886 VDYRTSAPKDRDDRPKDIDDRFDNIPLP 913
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = -2
Query: 863 DRFTHASEPDDALNPLTAVARSSTGYGLATSEQIEAAKGGLYGAVTRVEIQWRPEALVCK 684
D+ + S A+ P+ + + S Q+E +G + G + R + PE L+ K
Sbjct: 1447 DQLPNESPASTAIRPVLCQVKVDYDFLPQGSNQVEVKEGEVIGVLQRTDDDGNPEWLLIK 1506
Query: 683 R 681
R
Sbjct: 1507 R 1507
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,184,355
Number of Sequences: 27780
Number of extensions: 454015
Number of successful extensions: 1628
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1626
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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