Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12i11
(922 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 26 0.55
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 26 0.55
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 26 0.55
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 26 0.55
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 26 0.55
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 26 0.55
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 26 0.55
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 26 0.55
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 26 0.55
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 26 0.55
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 25 0.73
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 25 0.97
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 25 1.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 24 1.7
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 3.0
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 5.2
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 5.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 5.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 5.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 5.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 5.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 5.2
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 5.2
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 6.8
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 6.8
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 6.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 9.0
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 9.0
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 9.0
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 9.0
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 9.0
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 9.0
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.55
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -2
Query: 633 VIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+I N +++ + + Y+ NY KLY + Q P+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.55
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -2
Query: 633 VIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+I N +++ + + Y+ NY KLY + Q P+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.55
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -2
Query: 633 VIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+I N +++ + + Y+ NY KLY + Q P+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.55
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -2
Query: 633 VIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+I N +++ + + Y+ NY KLY + Q P+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.55
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -2
Query: 633 VIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+I N +++ + + Y+ NY KLY + Q P+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.55
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -2
Query: 633 VIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+I N +++ + + Y+ NY KLY + Q P+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.55
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -2
Query: 633 VIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+I N +++ + + Y+ NY KLY + Q P+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.55
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -2
Query: 633 VIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+I N +++ + + Y+ NY KLY + Q P+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 25.8 bits (54), Expect = 0.55
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -2
Query: 633 VIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+I N +++ + + Y+ NY KLY + Q P+
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPI 354
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 25.8 bits (54), Expect = 0.55
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -2
Query: 633 VIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+I N +++ + + Y+ NY KLY + Q P+
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPI 354
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 25.4 bits (53), Expect = 0.73
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 579 DRYSVDNYRKLYIKMEITNQFPVMYDHESSYIFVSKDILQLKGTMN-AFY 433
D Y+VD R L + E +NQ V D YI V DI+++ N AFY
Sbjct: 169 DGYTVD-LRHL-AQTEDSNQIEVGIDLTDYYISVEWDIIKVPAVRNEAFY 216
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.97
Identities = 10/41 (24%), Positives = 18/41 (43%)
Frame = -2
Query: 633 VIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+I N ++ + + Y+ NY KLY + Q P+
Sbjct: 81 IISNNNPLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 24.6 bits (51), Expect = 1.3
Identities = 13/56 (23%), Positives = 22/56 (39%)
Frame = -2
Query: 678 EYMTKSSIMKIITKFVIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
E + I+ ++ I N N + + +NY+KLY + Q PV
Sbjct: 74 ERSREPKIISSLSNKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNINYIEQIPV 129
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 24.2 bits (50), Expect = 1.7
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 573 YSVDNYRKLYIKMEITNQFPV 511
Y+ +NY+KLY + Q P+
Sbjct: 318 YNNNNYKKLYYNINYIEQIPI 338
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 3.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 564 DNYRKLYIKMEITNQFPV 511
+NYRKLY + Q P+
Sbjct: 102 NNYRKLYYNINYIEQIPI 119
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 564 DNYRKLYIKMEITNQFPV 511
+NY+KLY + Q PV
Sbjct: 104 NNYKKLYYNINYIEQIPV 121
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 564 DNYRKLYIKMEITNQFPV 511
+NY+KLY + Q PV
Sbjct: 104 NNYKKLYYNINYIEQIPV 121
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 564 DNYRKLYIKMEITNQFPV 511
+NY+KLY + Q PV
Sbjct: 104 NNYKKLYYNINYIEQIPV 121
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 564 DNYRKLYIKMEITNQFPV 511
+NY+KLY + Q PV
Sbjct: 104 NNYKKLYYNINYIEQIPV 121
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 564 DNYRKLYIKMEITNQFPV 511
+NY+KLY + Q PV
Sbjct: 104 NNYKKLYYNINYIEQIPV 121
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 564 DNYRKLYIKMEITNQFPV 511
+NY+KLY + Q PV
Sbjct: 104 NNYKKLYYNINYIEQIPV 121
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 564 DNYRKLYIKMEITNQFPV 511
+NY+KLY + Q PV
Sbjct: 104 NNYKKLYYNINYIEQIPV 121
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 564 DNYRKLYIKMEITNQFPV 511
+NY+KLY + Q PV
Sbjct: 346 NNYKKLYYNINYIEQIPV 363
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 564 DNYRKLYIKMEITNQFPV 511
+NY+KLY + Q P+
Sbjct: 102 NNYKKLYYNINYIEQIPI 119
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 564 DNYRKLYIKMEITNQFPV 511
+NY+KLY + Q P+
Sbjct: 102 NNYKKLYYNINYIEQIPI 119
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 564 DNYRKLYIKMEITNQFPV 511
+NY+KLY + Q P+
Sbjct: 104 NNYKKLYYNINYIEQIPI 121
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 564 DNYRKLYIKMEITNQFPV 511
+NY+KLY + Q PV
Sbjct: 102 NNYKKLYYNINYIEQVPV 119
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 9.0
Identities = 9/38 (23%), Positives = 17/38 (44%)
Frame = -2
Query: 624 ENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+ P + +S Y+ +NY++L + Q PV
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPV 114
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 9.0
Identities = 9/38 (23%), Positives = 17/38 (44%)
Frame = -2
Query: 624 ENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+ P + +S Y+ +NY++L + Q PV
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPV 114
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 9.0
Identities = 9/38 (23%), Positives = 17/38 (44%)
Frame = -2
Query: 624 ENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+ P + +S Y+ +NY++L + Q PV
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPV 114
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 9.0
Identities = 9/38 (23%), Positives = 17/38 (44%)
Frame = -2
Query: 624 ENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+ P + +S Y+ +NY++L + Q PV
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPV 114
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 9.0
Identities = 9/38 (23%), Positives = 17/38 (44%)
Frame = -2
Query: 624 ENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPV 511
+ P + +S Y+ +NY++L + Q PV
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPV 114
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 9.0
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +3
Query: 456 SIAKCLCSQKCTTIHDHT*QETGWLFPFLC 545
+IA C+C +KC H G ++ C
Sbjct: 100 TIAVCVCMRKCPRRHRPVCASNGKIYANHC 129
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,718
Number of Sequences: 438
Number of extensions: 5724
Number of successful extensions: 48
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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