Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc12i05
         (847 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040640-1|AAH40640.1|  802|Homo sapiens Rho guanine nucleotide ...    30   9.2  
BC012982-1|AAH12982.1|  706|Homo sapiens ARHGEF19 protein protein.     30   9.2  
AL109627-11|CAI22569.1|  167|Homo sapiens Rho guanine nucleotide...    30   9.2  
AL109627-10|CAI22568.1|  306|Homo sapiens Rho guanine nucleotide...    30   9.2  
AL109627-9|CAI22567.1|  502|Homo sapiens Rho guanine nucleotide ...    30   9.2  
AL109627-8|CAI22566.1|  802|Homo sapiens Rho guanine nucleotide ...    30   9.2  
AK091281-1|BAC03627.1|  502|Homo sapiens protein ( Homo sapiens ...    30   9.2  

>BC040640-1|AAH40640.1|  802|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 19 protein.
          Length = 802

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 247 CDVCLIHCAP*RRITLPRITQDCY 176
           CDV L HC   RR+ LP +T   Y
Sbjct: 452 CDVVLDHCPAFRRVYLPYVTNQAY 475


>BC012982-1|AAH12982.1|  706|Homo sapiens ARHGEF19 protein protein.
          Length = 706

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 247 CDVCLIHCAP*RRITLPRITQDCY 176
           CDV L HC   RR+ LP +T   Y
Sbjct: 356 CDVVLDHCPAFRRVYLPYVTNQAY 379


>AL109627-11|CAI22569.1|  167|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 19 protein.
          Length = 167

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 247 CDVCLIHCAP*RRITLPRITQDCY 176
           CDV L HC   RR+ LP +T   Y
Sbjct: 135 CDVVLDHCPAFRRVYLPYVTNQAY 158


>AL109627-10|CAI22568.1|  306|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 19 protein.
          Length = 306

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 247 CDVCLIHCAP*RRITLPRITQDCY 176
           CDV L HC   RR+ LP +T   Y
Sbjct: 140 CDVVLDHCPAFRRVYLPYVTNQAY 163


>AL109627-9|CAI22567.1|  502|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 19 protein.
          Length = 502

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 247 CDVCLIHCAP*RRITLPRITQDCY 176
           CDV L HC   RR+ LP +T   Y
Sbjct: 452 CDVVLDHCPAFRRVYLPYVTNQAY 475


>AL109627-8|CAI22566.1|  802|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 19 protein.
          Length = 802

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 247 CDVCLIHCAP*RRITLPRITQDCY 176
           CDV L HC   RR+ LP +T   Y
Sbjct: 452 CDVVLDHCPAFRRVYLPYVTNQAY 475


>AK091281-1|BAC03627.1|  502|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33962 fis, clone CTONG2018900, moderately
           similar to PROBABLE GUANINE NUCLEOTIDE REGULATORY
           PROTEIN TIM. ).
          Length = 502

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 247 CDVCLIHCAP*RRITLPRITQDCY 176
           CDV L HC   RR+ LP +T   Y
Sbjct: 452 CDVVLDHCPAFRRVYLPYVTNQAY 475


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,441,825
Number of Sequences: 237096
Number of extensions: 2841715
Number of successful extensions: 6084
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6082
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)