Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12h16
(925 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 28 0.14
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 28 0.14
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 28 0.14
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 28 0.14
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 28 0.14
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 28 0.14
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 28 0.14
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 28 0.14
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 28 0.14
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 28 0.14
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 27 0.18
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 3.0
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 3.0
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 3.0
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 3.0
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 3.0
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 3.0
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 3.0
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 3.0
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 3.0
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 3.0
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 3.9
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 5.2
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 23 5.2
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 5.2
DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein. 22 9.0
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 27.9 bits (59), Expect = 0.14
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 385 RPMNQFFRKHLKPTNLVNLHQELTN*NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
R N+ R+ K +++ + L+N NY +Y N Y N+ HN + Y+ NY+
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSN----NY-NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 27.9 bits (59), Expect = 0.14
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 385 RPMNQFFRKHLKPTNLVNLHQELTN*NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
R N+ R+ K +++ + L+N NY +Y N Y N+ HN + Y+ NY+
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSN----NY-NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 27.9 bits (59), Expect = 0.14
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 385 RPMNQFFRKHLKPTNLVNLHQELTN*NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
R N+ R+ K +++ + L+N NY +Y N Y N+ HN + Y+ NY+
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSN----NY-NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 27.9 bits (59), Expect = 0.14
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 385 RPMNQFFRKHLKPTNLVNLHQELTN*NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
R N+ R+ K +++ + L+N NY +Y N Y N+ HN + Y+ NY+
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSN----NY-NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 27.9 bits (59), Expect = 0.14
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 385 RPMNQFFRKHLKPTNLVNLHQELTN*NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
R N+ R+ K +++ + L+N NY +Y N Y N+ HN + Y+ NY+
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSN----NY-NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 27.9 bits (59), Expect = 0.14
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 385 RPMNQFFRKHLKPTNLVNLHQELTN*NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
R N+ R+ K +++ + L+N NY +Y N Y N+ HN + Y+ NY+
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSN----NY-NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 27.9 bits (59), Expect = 0.14
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 385 RPMNQFFRKHLKPTNLVNLHQELTN*NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
R N+ R+ K +++ + L+N NY +Y N Y N+ HN + Y+ NY+
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSN----NY-NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 27.9 bits (59), Expect = 0.14
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 385 RPMNQFFRKHLKPTNLVNLHQELTN*NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
R N+ R+ K +++ + L+N NY +Y N Y N+ HN + Y+ NY+
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSN----NY-NYNNNYNNYNKHNYNKLYYNINYI 116
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 27.9 bits (59), Expect = 0.14
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 385 RPMNQFFRKHLKPTNLVNLHQELTN*NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
R N+ R+ K +++ + L+N NY +Y N Y N+ HN + Y+ NY+
Sbjct: 299 RSRNRTERERSKEPKIISNNNSLSN----NY-NYNNNYNNYNKHNYNKLYYNINYI 349
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 27.9 bits (59), Expect = 0.14
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 385 RPMNQFFRKHLKPTNLVNLHQELTN*NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
R N+ R+ K +++ + L+N NY +Y N Y N+ HN + Y+ NY+
Sbjct: 299 RSRNRTERERSKEPKIISNNNSLSN----NY-NYNNNYNNYNKHNYNKLYYNINYI 349
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 27.5 bits (58), Expect = 0.18
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 385 RPMNQFFRKHLKPTNLVNLHQELTN*NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
R N+ R+ K +++ + L+N NY +Y N Y N+ HN + Y+ NY+
Sbjct: 66 RSRNRTERERSKEPKIISNNNPLSN----NY-NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 463 NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
N+ NY +Y N+ N +N Y+ NY+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 463 NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
N+ NY +Y N+ N +N Y+ NY+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 463 NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
N+ NY +Y N+ N +N Y+ NY+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 463 NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
N+ NY +Y N+ N +N Y+ NY+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 463 NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
N+ NY +Y N+ N +N Y+ NY+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 463 NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
N+ NY +Y N+ N +N Y+ NY+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 463 NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
N+ NY +Y N+ N +N Y+ NY+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 463 NHPNYPSYLNFYLNWMIHNASPSYHRTNYM 552
N+ NY +Y N+ N +N Y+ NY+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.4 bits (48), Expect = 3.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 131 HYNNNYQSSMLTYKV 87
+YNNNY S L Y +
Sbjct: 313 NYNNNYNSKKLYYNI 327
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 3.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 131 HYNNNYQSSMLTYKV 87
+YNNNY S L Y +
Sbjct: 324 NYNNNYNSKKLYYNI 338
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.0 bits (47), Expect = 3.9
Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
Frame = +1
Query: 463 NH-PNYPSYLNFYLNW 507
NH PNY N+Y+ W
Sbjct: 663 NHSPNYDQVTNWYMGW 678
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.6 bits (46), Expect = 5.2
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 360 YKGILDHQSSHESILSETSKTDQFGELTSGANQLKSSKLSQLFEFLSKLDD 512
+KG+LD + E + ET+ + + S + +K + +S + L D
Sbjct: 288 FKGVLDVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGD 338
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 22.6 bits (46), Expect = 5.2
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 360 YKGILDHQSSHESILSETSKTDQFGELTSGANQLKSSKLSQLFEFLSKLDD 512
+KG+LD + E + ET+ + + S + +K + +S + L D
Sbjct: 203 FKGVLDVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGD 253
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.6 bits (46), Expect = 5.2
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 360 YKGILDHQSSHESILSETSKTDQFGELTSGANQLKSSKLSQLFEFLSKLDD 512
+KG+LD + E + ET+ + + S + +K + +S + L D
Sbjct: 522 FKGVLDVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGD 572
>DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein.
Length = 135
Score = 21.8 bits (44), Expect = 9.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 681 LSTNTDDVTGPERTMQFSKLIKCNVPIKPLRPIV 782
L T ++ + ++ SKLIKC K L+ I+
Sbjct: 100 LITECSAISDADIHLKSSKLIKCFAKYKTLKEIM 133
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,386
Number of Sequences: 438
Number of extensions: 5037
Number of successful extensions: 27
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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