Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12h04
(901 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 23 3.8
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 5.0
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 6.6
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 22 6.6
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 6.6
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 6.6
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 6.6
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 8.8
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 22 8.8
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 8.8
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 22 8.8
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 23.0 bits (47), Expect = 3.8
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 452 IIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFC 336
+IF Y L VII+ N ++I+ + A S K IR +C
Sbjct: 6 VIFVYILSVAVIIRANGINEILKI---MAVSMKDIR-YC 40
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.6 bits (46), Expect = 5.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 635 IDNLYNKLNWERTRRLMKGD 576
+DNL +L ER +L +GD
Sbjct: 626 VDNLLGELGGERLLKLAQGD 645
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 566 NCATVNRSSLKYIKQAQSLLGIP 498
NC T +SL+ KQ + +G P
Sbjct: 240 NCWTQTENSLEKAKQVGAFMGCP 262
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 566 NCATVNRSSLKYIKQAQSLLGIP 498
NC T +SL+ KQ + +G P
Sbjct: 111 NCWTQTENSLEKAKQVGAFMGCP 133
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 6.6
Identities = 10/40 (25%), Positives = 15/40 (37%)
Frame = -1
Query: 121 YETDGGRHYIKSDGRSHRQQYRRYHPSQQLAD*RRSTWPI 2
Y T G H+ G SH +H S + + P+
Sbjct: 409 YSTPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQHSTPL 448
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.2 bits (45), Expect = 6.6
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = -3
Query: 629 NLYNKLNWERTRRLMKGDVPSNCATVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKI 450
N+ KL+ R +G+ +N N+ S + + A P Y Q K+ QK
Sbjct: 77 NITIKLD-TRAEDSTRGEQEANLGYTNKMSTRGKRPAS-----PGYVQPPTKHQKLDQKF 130
Query: 449 IFPYQ 435
IFP +
Sbjct: 131 IFPQE 135
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 566 NCATVNRSSLKYIKQAQSLLGIP 498
NC T +SL+ KQ + +G P
Sbjct: 240 NCWTQTENSLEKAKQVGAFMGCP 262
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 8.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 546 AVYCSAIGWHVALHKPARSLPIQFVVQIINFLVRQI 653
+ YC V + P R L IQ QI+ F + I
Sbjct: 269 STYCEP---QVVIVSPTRELTIQIWQQIVKFSLNSI 301
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.8 bits (44), Expect = 8.8
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 588 KPARSLPIQFVVQIINFLVRQIDYIARGLFAI 683
KP + +P+Q + N +++ I+++ + L AI
Sbjct: 54 KPGKLVPLQCDLSNQNDILKVIEWVEKNLGAI 85
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 8.8
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 784 KSWWKAMTFYYV 749
K WWK FY V
Sbjct: 22 KGWWKNAIFYQV 33
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.8 bits (44), Expect = 8.8
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -3
Query: 872 LKNRNXQSVPPPIKSNLRP-IACEIPLSH-FKELVESNDFLLCFNLETSTMVKIL 714
L N+ + P +K++ R ++ P+ + +K +E+ + L FN++T KIL
Sbjct: 7 LANKFYRISPQILKNDKRIYLSPRTPIKNVYKNNIETKNQLSPFNIDTPNRQKIL 61
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,962
Number of Sequences: 438
Number of extensions: 5522
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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