Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12g01
(831 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029690-1|ABL75747.1| 145|Drosophila melanogaster IP17407p pro... 31 1.5
BT029644-1|ABL75703.1| 145|Drosophila melanogaster IP17207p pro... 31 1.5
AE014134-1591|AAF52734.1| 275|Drosophila melanogaster CG9555-PA... 30 3.4
BT021312-1|AAX33460.1| 1215|Drosophila melanogaster RE14947p pro... 30 4.5
BT001724-1|AAN71479.1| 568|Drosophila melanogaster RE69557p pro... 30 4.5
AY084135-1|AAL89873.1| 382|Drosophila melanogaster RE21313p pro... 30 4.5
AE014296-3637|AAF51793.2| 568|Drosophila melanogaster CG7442-PA... 30 4.5
AE014296-3370|AAF51604.1| 382|Drosophila melanogaster CG5199-PA... 30 4.5
AE014134-2679|AAN10933.1| 1170|Drosophila melanogaster CG12455-P... 30 4.5
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P... 30 4.5
AE014296-583|AAF47729.2| 1427|Drosophila melanogaster CG14964-PA... 29 5.9
>BT029690-1|ABL75747.1| 145|Drosophila melanogaster IP17407p
protein.
Length = 145
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -2
Query: 485 AFASESLAEANEKIIHFANALVTANAGLVQANTMLNEARRETAQLANRMADI 330
AF + A+++++ L+ + L A+T L +A++ L NR+AD+
Sbjct: 79 AFTRSFVLSASKQLVTTDQMLIKSQHSLQSAHTSLQQAQKNAQDLQNRVADV 130
>BT029644-1|ABL75703.1| 145|Drosophila melanogaster IP17207p
protein.
Length = 145
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -2
Query: 485 AFASESLAEANEKIIHFANALVTANAGLVQANTMLNEARRETAQLANRMADI 330
AF + A+++++ L+ + L A+T L +A++ L NR+AD+
Sbjct: 79 AFTRSFVLSASKQLVTTDQMLIKSQHSLQSAHTSLQQAQKNAQDLQNRVADV 130
>AE014134-1591|AAF52734.1| 275|Drosophila melanogaster CG9555-PA
protein.
Length = 275
Score = 30.3 bits (65), Expect = 3.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 622 LLFIISWITPSLVMSTVCGC 681
+ FI+ W P L + TVCGC
Sbjct: 210 IYFILDWERPGLAIGTVCGC 229
>BT021312-1|AAX33460.1| 1215|Drosophila melanogaster RE14947p
protein.
Length = 1215
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 533 KMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANA 408
KM+ NY I+ + F +S E E I+H NA+V A
Sbjct: 586 KMNPNYNSIDFTEVEHLFEDQSPREPGESILHIRNAMVRHEA 627
>BT001724-1|AAN71479.1| 568|Drosophila melanogaster RE69557p
protein.
Length = 568
Score = 29.9 bits (64), Expect = 4.5
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +1
Query: 601 NSTA*GSLLFIISWITPSLVMSTVCGCRYS--GSPCLTTLSGAGVY--GIDPDSLYVVLY 768
N+ A +L+ I + P L+M G RYS G + L G G D L +VL+
Sbjct: 394 NNFAYIALVEIPGFFMPLLIMDRF-GRRYSLCGLMLASGLCCIGTIFTGADQPVLQLVLF 452
Query: 769 FLSTLTITACLQFTYF 816
+ LTITA Q YF
Sbjct: 453 LVGKLTITASFQVLYF 468
>AY084135-1|AAL89873.1| 382|Drosophila melanogaster RE21313p
protein.
Length = 382
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 146 VLNKVK-ETLPRNQYKAKHNKITLLQNLTREQLIDAVQSSMTETSD 12
V+ K+K E P Q +LLQ L++EQLID + +++ SD
Sbjct: 175 VVKKLKMEDRPVGQTNTDATLPSLLQGLSQEQLIDLIMNNIKSASD 220
>AE014296-3637|AAF51793.2| 568|Drosophila melanogaster CG7442-PA
protein.
Length = 568
Score = 29.9 bits (64), Expect = 4.5
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +1
Query: 601 NSTA*GSLLFIISWITPSLVMSTVCGCRYS--GSPCLTTLSGAGVY--GIDPDSLYVVLY 768
N+ A +L+ I + P L+M G RYS G + L G G D L +VL+
Sbjct: 394 NNFAYIALVEIPGFFMPLLIMDRF-GRRYSLCGLMLASGLCCIGTIFTGADQPVLQLVLF 452
Query: 769 FLSTLTITACLQFTYF 816
+ LTITA Q YF
Sbjct: 453 LVGKLTITASFQVLYF 468
>AE014296-3370|AAF51604.1| 382|Drosophila melanogaster CG5199-PA
protein.
Length = 382
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 146 VLNKVK-ETLPRNQYKAKHNKITLLQNLTREQLIDAVQSSMTETSD 12
V+ K+K E P Q +LLQ L++EQLID + +++ SD
Sbjct: 175 VVKKLKMEDRPVGQTNTDATLPSLLQGLSQEQLIDLIMNNIKSASD 220
>AE014134-2679|AAN10933.1| 1170|Drosophila melanogaster CG12455-PB,
isoform B protein.
Length = 1170
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 533 KMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANA 408
KM+ NY I+ + F +S E E I+H NA+V A
Sbjct: 541 KMNPNYNSIDFTEVEHLFEDQSPREPGESILHIRNAMVRHEA 582
>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
isoform A protein.
Length = 2190
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 533 KMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANA 408
KM+ NY I+ + F +S E E I+H NA+V A
Sbjct: 548 KMNPNYNSIDFTEVEHLFEDQSPREPGESILHIRNAMVRHEA 589
>AE014296-583|AAF47729.2| 1427|Drosophila melanogaster CG14964-PA
protein.
Length = 1427
Score = 29.5 bits (63), Expect = 5.9
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 VIPQVLCTGKYAPA-VKMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANAGL 402
++P P+ +KMD G+ ++ A+E EANE+I +N L NA
Sbjct: 1050 IVPPTATVANSNPSTLKMDLAKGIKSFFSRDKRSATEKNTEANEEI---SNPLERTNAAA 1106
Query: 401 VQANTMLNEARRETAQLANR 342
+ A+ + +E +L +
Sbjct: 1107 IAADLEVKRKAKEEEELRRK 1126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,147,449
Number of Sequences: 53049
Number of extensions: 825985
Number of successful extensions: 2742
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2738
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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