Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12f18
(883 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 446 e-126
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 404 e-113
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 197 1e-51
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 194 2e-50
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 173 2e-44
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 161 9e-41
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 156 3e-39
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 150 3e-37
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 97 5e-33
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 134 2e-32
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 126 6e-30
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 125 7e-30
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 124 1e-29
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 122 9e-29
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 119 6e-28
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 107 2e-24
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 104 1e-23
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 95 1e-20
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 94 3e-20
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 78 1e-15
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 75 1e-14
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 75 1e-14
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 74 3e-14
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 72 1e-13
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 61 2e-10
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 55 1e-08
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 48 2e-06
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 44 4e-05
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 38 0.003
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 35 0.013
SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3 |Schi... 31 0.29
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 29 1.2
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc... 29 1.2
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 28 1.5
SPCC16C4.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 1.5
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 28 1.5
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 27 3.5
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 27 3.5
SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces pomb... 27 3.5
SPAC1786.01c ||SPAC31G5.20c|triacylglycerol lipase|Schizosacchar... 26 6.2
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 26 6.2
SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharo... 26 8.2
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 446 bits (1099), Expect = e-126
Identities = 201/247 (81%), Positives = 233/247 (94%)
Frame = -1
Query: 883 GRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHE 704
GRV DMIRRR LRTR++KML+LDEADE+LN+GFKEQIYD+YRYLPP TQVV++SATLP +
Sbjct: 148 GRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPPGTQVVVVSATLPQD 207
Query: 703 ILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFC 524
+LEMT+KF T+P+RILVKRDELTLEG+KQ+F+AVE+EEWKFDTLCDLYDTLTITQAVIFC
Sbjct: 208 VLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFC 267
Query: 523 NTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQ 344
N++RKVDWLT+KM+EANFTV+SMHG+MPQKERD IM++FR G SRVLI TD+WARGIDVQ
Sbjct: 268 NSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQ 327
Query: 343 QVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMP 164
QVSLVINYDLP NRE YIHRIGRSGRFGRKGVAINFV ++D+RILRDIEQYYST IDEMP
Sbjct: 328 QVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDIEQYYSTVIDEMP 387
Query: 163 MNVADLI 143
MN+ D++
Sbjct: 388 MNIGDMV 394
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 404 bits (994), Expect = e-113
Identities = 181/247 (73%), Positives = 223/247 (90%)
Frame = -1
Query: 883 GRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHE 704
GRV DMI+RR L T +++M VLDEADEML++GFK+QIYD+++ LPP QVVL+SAT+P +
Sbjct: 146 GRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPTAQVVLLSATMPQD 205
Query: 703 ILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFC 524
+LE+T+KFM DPIRILVK+DELTLEGIKQF+VAVE+EEWK DTLCDLY+T+T+TQAVIFC
Sbjct: 206 VLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTLCDLYETVTVTQAVIFC 265
Query: 523 NTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQ 344
NT+RKVDWLT+++ E +FTVSSMHGDM Q +RD +M EFR+G SR+LITTD+ ARGIDVQ
Sbjct: 266 NTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQ 325
Query: 343 QVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMP 164
QVSLVINYDLP NRE YIHRIGR GRFGRKGV+INFV +DD+R++R+IEQ+Y+T I+EMP
Sbjct: 326 QVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEEMP 385
Query: 163 MNVADLI 143
MN+ADLI
Sbjct: 386 MNIADLI 392
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 197 bits (481), Expect = 1e-51
Identities = 104/248 (41%), Positives = 155/248 (62%), Gaps = 8/248 (3%)
Frame = -1
Query: 883 GRVFDMIRRRVLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPH 707
G V D+++RR L R IK+ VLDEAD ML++ G +Q + LP TQ+VL SAT
Sbjct: 239 GTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLFSATFSE 298
Query: 706 EILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIF 527
+ + +F + I +K +EL++EGIKQ ++ + EE K++ L +LY LTI Q++IF
Sbjct: 299 RVEKYAERFAPNANEIRLKTEELSVEGIKQLYMDCQSEEHKYNVLVELYGLLTIGQSIIF 358
Query: 526 CNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDV 347
C K + + ++M TV+ + G++ +RD IM FR G S+VL+TT+V ARGIDV
Sbjct: 359 CKKKDTAEEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDV 418
Query: 346 QQVSLVINYDLPNNR------ELYIHRIGRSGRFGRKGVAINFV-KSDDIRILRDIEQYY 188
QV+LV+NYD+P ++ + Y+HRIGR+GRFGR GV+INFV + I++Y+
Sbjct: 419 SQVNLVVNYDMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINFVHDKKSWEEMNAIQEYF 478
Query: 187 STQIDEMP 164
I +P
Sbjct: 479 QRPITRVP 486
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 194 bits (472), Expect = 2e-50
Identities = 97/243 (39%), Positives = 156/243 (64%), Gaps = 3/243 (1%)
Frame = -1
Query: 883 GRVFDMIRRRVLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPH 707
GR+ ++R ++L+ S+K VLDE D++L + I +V+R PP QV++ SATL +
Sbjct: 182 GRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMMFSATLSN 241
Query: 706 EILEMTSKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 530
EI + KFM +P+ I V + +LTL G++Q +V +E E+ K + DL D+L Q VI
Sbjct: 242 EIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLE-EKAKNRKINDLLDSLEFNQVVI 300
Query: 529 FCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGID 350
F + + + L + ++E NF +HG +PQ+ER K F+ R+ + TDV+ RGID
Sbjct: 301 FVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGID 360
Query: 349 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS-DDIRILRDIEQYYSTQID 173
+++V++VINYD+P++ + Y+HR+GR+GRFG KG+AI F S +D +IL I++ + I
Sbjct: 361 IERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSEEDSQILDKIQERFEVNIT 420
Query: 172 EMP 164
E+P
Sbjct: 421 ELP 423
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 173 bits (422), Expect = 2e-44
Identities = 92/243 (37%), Positives = 136/243 (55%)
Frame = -1
Query: 883 GRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHE 704
GRV D+ + V V+DEAD++L+ F I + Y P Q+ L SAT P
Sbjct: 171 GRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLYSATFPLI 230
Query: 703 ILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFC 524
+ K + P I + DELTL G+ Q++ V+ E K L L+ L I Q++IFC
Sbjct: 231 VKNFMDKHLNKPYEINLM-DELTLRGVTQYYAFVD-ESQKVHCLNTLFSKLQINQSIIFC 288
Query: 523 NTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQ 344
N+ +V+ L +K+ E ++ H M Q R+ + FR+G R L+ +D+ RGID+Q
Sbjct: 289 NSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQ 348
Query: 343 QVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMP 164
V++VIN+D P N E Y+HRIGRSGRFG +G+AI+F+ D L IE T+I +P
Sbjct: 349 AVNVVINFDFPKNAETYLHRIGRSGRFGHRGLAISFISWADRFNLYRIENELGTEIQPIP 408
Query: 163 MNV 155
++
Sbjct: 409 PSI 411
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 161 bits (392), Expect = 9e-41
Identities = 85/231 (36%), Positives = 133/231 (57%), Gaps = 3/231 (1%)
Frame = -1
Query: 883 GRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHE 704
GR+ DM+ R + LVLDEAD ML+ GF+ QI + + P Q V+ SAT P E
Sbjct: 254 GRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKE 313
Query: 703 ILEMTSKFMTDPIRILVKRDELTLE-GIKQFFVAVEREEWKFDTLCDLYDTLTI--TQAV 533
+ + ++ D I++ V +L IKQ V+ + + D+ + L + +
Sbjct: 314 VQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDNKVL 373
Query: 532 IFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGI 353
IF TKR D +T+ +++ + ++HGD Q ERD ++ EFR+G+S +++ TDV +RGI
Sbjct: 374 IFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGI 433
Query: 352 DVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDI 200
DV+ ++ V NYD P N E Y+HRIGR+GR G KG A + SD+ + R++
Sbjct: 434 DVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQAREL 484
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 156 bits (379), Expect = 3e-39
Identities = 92/245 (37%), Positives = 137/245 (55%), Gaps = 5/245 (2%)
Frame = -1
Query: 883 GRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT----QVVLISAT 716
GR+ D+I R + +IK LVLDEAD ML+ GF+ QI + + Q ++ SAT
Sbjct: 314 GRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSAT 373
Query: 715 LPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ- 539
P +I + F+ D + + V R T E I Q V VE E K L D+ TL
Sbjct: 374 FPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSE-KRSYLLDILHTLPPEGL 432
Query: 538 AVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWAR 359
+IF TKR D LT + +NF +S+HGD Q+ER+ ++ FRSG++ +++ T V +R
Sbjct: 433 TLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASR 492
Query: 358 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQ 179
G+D+ V+ VINYDLP + + Y+HRIGR+GR G G A+ F ++ I +++ +
Sbjct: 493 GLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEA 552
Query: 178 IDEMP 164
E P
Sbjct: 553 NQECP 557
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 150 bits (363), Expect = 3e-37
Identities = 83/253 (32%), Positives = 132/253 (52%), Gaps = 7/253 (2%)
Frame = -1
Query: 883 GRVFDMIRR---RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATL 713
GR+ D++ RV LVLDEAD M + GF+ Q+ + + P Q VL SAT
Sbjct: 550 GRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATF 609
Query: 712 PHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDL----YDTLTI 545
P + + K + P+ I V + ++Q V V EE KF L +L Y+
Sbjct: 610 PRAMEALARKVLKKPVEITVGGRSVVASEVEQI-VEVRPEESKFSRLLELLGELYNNQLD 668
Query: 544 TQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVW 365
+ ++F + + D L + + +T +S+HG Q +RD+ + ++++G VLI T V
Sbjct: 669 VRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVV 728
Query: 364 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 185
ARG+DV+ + LV+NYD PN+ E Y+HR+GR+GR G GVA+ F+ + + DI +
Sbjct: 729 ARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKALK 788
Query: 184 TQIDEMPMNVADL 146
+P + L
Sbjct: 789 MSKQPVPKELQTL 801
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 97.5 bits (232), Expect(2) = 5e-33
Identities = 41/115 (35%), Positives = 78/115 (67%)
Frame = -1
Query: 535 VIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARG 356
++F TK V+++++ + +A ++VS ++G + Q+ R N + FR G++ +L+ TDV +RG
Sbjct: 350 LVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASRG 409
Query: 355 IDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQY 191
ID+ ++ VINYD P ++++HR+GR+ R GR G A + V+++D L D++ +
Sbjct: 410 IDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAGYLLDLQLF 464
Score = 59.7 bits (138), Expect(2) = 5e-33
Identities = 31/113 (27%), Positives = 55/113 (48%)
Frame = -1
Query: 883 GRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHE 704
GR + L SI+ +V DEAD + GF Q+ ++ LP + Q +L SATLP
Sbjct: 198 GRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLFSATLPRT 257
Query: 703 ILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTI 545
+++ + DP+ + + + ++ F +V+ E + LC L D + +
Sbjct: 258 LVDFAKAGLQDPVLVRLDVESKVSADLQSAFFSVKTAEREAALLCILQDIIKL 310
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 134 bits (323), Expect = 2e-32
Identities = 72/238 (30%), Positives = 130/238 (54%), Gaps = 3/238 (1%)
Frame = -1
Query: 883 GRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPH 707
GR D +R + +I+++V+DEAD ML GF +++ ++ + P + Q +L SAT+
Sbjct: 389 GRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQTMLFSATMTD 448
Query: 706 EILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAV--EREEWKFDTLCDLYDTLTITQAV 533
++ ++ + P+R+ V + T + + Q FV V +RE + L L L + +
Sbjct: 449 KVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFVRVRPQRELLRPAMLIYLCKELFHRRTI 508
Query: 532 IFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGI 353
IF +K + + + +HG + Q++R +++FR G+ L+ TDV +RGI
Sbjct: 509 IFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGI 568
Query: 352 DVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQ 179
D++ + +VINY+ P E+Y+HR+GR+ R GR G AI D ++L+ + + S Q
Sbjct: 569 DIKGIEVVINYEAPATHEVYLHRVGRTARAGRSGRAITLAGEGDRKVLKGVFKNSSAQ 626
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 126 bits (303), Expect = 6e-30
Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 11/232 (4%)
Frame = -1
Query: 883 GRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT-----QVVLISA 719
GR+ D+I + + LVLDEAD ML+ GF++ I ++ + P T Q V SA
Sbjct: 294 GRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPTRNGSRQTVFFSA 353
Query: 718 TLPHEILEMTSKFMTDPIRILVKRDELTL-EGIKQFFVAVE---REEWKFDTLC--DLYD 557
T P + + + F+ DP++I + DEL + I Q ++ +E D L L
Sbjct: 354 TWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLDNLLRKHLSS 413
Query: 556 TLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLIT 377
+ +IF K++ + + + V +HGDM Q R + +F+SG+ VL+
Sbjct: 414 GGKDDKILIFVLYKKEAARVEGTLAR-KYNVVGIHGDMSQGARLQALNDFKSGKCPVLVA 472
Query: 376 TDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 221
TDV ARG+D+ +V LVIN P E Y+HRIGR+GR KG AI F D
Sbjct: 473 TDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTPQD 524
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 125 bits (302), Expect = 7e-30
Identities = 80/251 (31%), Positives = 134/251 (53%), Gaps = 13/251 (5%)
Frame = -1
Query: 883 GRVFDMIRRRVLRT----RSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT--QVVLIS 722
GR+ D+IR T R IK LV+DEAD +L+ F + + D + LP + Q +L +
Sbjct: 134 GRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLPASEDRQTLLFT 193
Query: 721 ATLPHEILEMT---SKFMTDPIRIL-VKRDELTLEGIKQ---FFVAVEREEWKFDTLCDL 563
AT+ I ++ K P+ + V+ D +++ Q FV+ + E L +
Sbjct: 194 ATVTDAIRQLKYQPQKNNKPPLWLYEVETDNISVPSTLQQSYIFVSSQVREAYLVHLLTI 253
Query: 562 YDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVL 383
+ A+IF N R + + ++ V+ +H +M Q+ER N + FR+ +++L
Sbjct: 254 PENAK-KSAIIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINSLGRFRAEAAKIL 312
Query: 382 ITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRD 203
+ TDV +RG+D+ V LVIN+DLP + + YIHR+GR+ R GR G +I+ V D+ ++
Sbjct: 313 VATDVASRGLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESISIVTERDVDLVHA 372
Query: 202 IEQYYSTQIDE 170
IE T++ E
Sbjct: 373 IEDRVGTKLSE 383
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 124 bits (300), Expect = 1e-29
Identities = 64/248 (25%), Positives = 130/248 (52%), Gaps = 20/248 (8%)
Frame = -1
Query: 883 GRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------------ 740
GR+ D + RR+ +V+DEAD ML+ GF++ + + LP +
Sbjct: 384 GRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSLPSSNASEKDGSILATA 443
Query: 739 -------QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKF 581
Q ++ SATLP + + ++ +P+ + + ++ ++Q + + K+
Sbjct: 444 NSSSSRRQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKW 503
Query: 580 DTLCDLYDTLTITQAVI-FCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFR 404
+ ++ ++ + +I F N KR ++ + +++ + ++HG Q++R+ +++ R
Sbjct: 504 RRVEEILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLR 563
Query: 403 SGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSD 224
+ + +L+ TD+ RGID+ VSLV+NY++ + E Y HRIGR+GR G+ G AI F+ +
Sbjct: 564 NKTADILVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPE 623
Query: 223 DIRILRDI 200
D + D+
Sbjct: 624 DTDVYYDL 631
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 122 bits (293), Expect = 9e-29
Identities = 69/239 (28%), Positives = 121/239 (50%), Gaps = 1/239 (0%)
Frame = -1
Query: 883 GRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPH 707
GR+ D + + +++K L++DEAD +L+ F I + + +P + +L SAT+
Sbjct: 173 GRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLLFSATMTS 232
Query: 706 EILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIF 527
++ ++ + P+R+ V T++ + Q ++ + K L L + L +IF
Sbjct: 233 KVEKLQRASLHQPVRVAVSSKFSTVDTLIQRYLFFPFKH-KDTYLVYLVNELAGNSIIIF 291
Query: 526 CNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDV 347
T L ++ F+ +HG + Q R + +F+SG L+ TDV ARG+D+
Sbjct: 292 ARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDVAARGLDI 351
Query: 346 QQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDE 170
V +VINYD+P + + YIHR+GR+ R GR G +I V D+ IE ++ E
Sbjct: 352 PLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFLRIEATIGKKMQE 410
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 119 bits (286), Expect = 6e-28
Identities = 70/212 (33%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
Frame = -1
Query: 850 LRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV-LISATLPHEILEMTSKFMT 674
L ++ V+DEAD + GF EQ + + L SAT+P + E+
Sbjct: 185 LSFEKVEFFVMDEADRLFEPGFIEQTDHILSACTSSNICKSLFSATIPSRVEELAKVVTV 244
Query: 673 DPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWL 497
DPIRI+V + + I Q + V + K L + + + VIF + L
Sbjct: 245 DPIRIIVGLKDAATDSIDQRLLFVGSDTSKIVILRQMISNGELKPRVVIFVQDIERAKAL 304
Query: 496 TQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYD 317
++ V +HG++PQ +R+ + +FR G+ VLI TD+ ARGID V +VIN+D
Sbjct: 305 YTELLFDEIHVGVIHGELPQAKREEALAKFRKGEIWVLIATDLLARGIDFHGVKMVINFD 364
Query: 316 LPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 221
P + YIHRIGR+GR G G A+ F +D
Sbjct: 365 FPQSVHSYIHRIGRTGRAGNTGQAVTFFTKED 396
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 107 bits (258), Expect = 2e-24
Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 5/250 (2%)
Frame = -1
Query: 883 GRVFDMIRRRV-LRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPH 707
GR+ I + V T ++ML+LDEAD +L+ GF+ + + LP Q +L SAT
Sbjct: 169 GRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQTMLFSATQTK 228
Query: 706 EILEMTSKFMTDPIRILVKRDEL--TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAV 533
+ ++ + +P I V ++ T + QF++ V E K D L T + +
Sbjct: 229 SVKDLARLSLQNPDFISVHENDTSSTPSNLNQFYLTVPLTE-KLDILFGFIRTHLKFKTI 287
Query: 532 IFCNTKRKVDWL--TQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWAR 359
+F ++ ++V ++ T + ++ +HG Q R + +F S + VL TD+ AR
Sbjct: 288 VFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQTTRTEVTAKFTSSRHVVLFCTDIVAR 347
Query: 358 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQ 179
G+D V VI D P + + YIHR+GR+ R+ R G A+ + + L+ +E S +
Sbjct: 348 GLDFPAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNALLLLLPSEEAFLKRLE---SKK 404
Query: 178 IDEMPMNVAD 149
I +NV D
Sbjct: 405 IAVERINVKD 414
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 104 bits (250), Expect = 1e-23
Identities = 64/233 (27%), Positives = 125/233 (53%), Gaps = 7/233 (3%)
Frame = -1
Query: 883 GRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT-QVVLISATLP 710
GR+ D ++ + R+++ LV+DEAD +L GF++++ + + LP Q +L SAT
Sbjct: 220 GRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQTLLFSATQT 279
Query: 709 HEILEMTS-KFMTDPIRILVK--RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 539
++ ++ P+ + V + T+EG++Q +V V+ ++ +F L +
Sbjct: 280 TKVEDLARISLKPGPLYVNVDSGKPTSTVEGLEQGYVVVDSDK-RFLLLFSFLKRNLKKK 338
Query: 538 AVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWAR 359
++F ++ V ++ + + + V +HG Q+ R N EF + + +L+ T+V AR
Sbjct: 339 VIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKGILLCTNVAAR 398
Query: 358 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGV--AINFVKSDDIRILR 206
G+D+ V ++ YD P++ YIHR+GR+ R G KG ++ F+ ++ LR
Sbjct: 399 GLDIPAVDWIVQYDPPDDPRDYIHRVGRTAR-GTKGTGKSLMFLAPSELGFLR 450
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 95.1 bits (226), Expect = 1e-20
Identities = 68/239 (28%), Positives = 120/239 (50%), Gaps = 10/239 (4%)
Frame = -1
Query: 883 GRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA-TQVVLISATLP 710
GR+ D ++ R+L + S +LDEAD +++ GF E I +++ + T+ + SAT+P
Sbjct: 172 GRLEDHLQNPRILESLSTDSFILDEADRLMDMGFAESILNIHEAVTTTKTRKLCFSATMP 231
Query: 709 HEILEMTSKFM-TD--PIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT- 542
++ + + TD I L + T E + QF + + ++ F + L LT +
Sbjct: 232 PKVSNVFRGILGTDFKLINCLDPNEPPTHERVPQFVIETKLDK-VFSSSLSLLQQLTSSN 290
Query: 541 ---QAVIFCNTKRKVDWLTQKMQE-ANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITT 374
+ ++F T VD++ ++ +H + +R +I + FR QS +L T
Sbjct: 291 PSSRIIVFLPTISMVDFVGGVLENHLKIPCFILHSGLTTAQRRSITESFRKCQSGILFAT 350
Query: 373 DVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIE 197
DV ARG+D ++ V+ P+N + YIHRIGR+GR G+ G A + + L I+
Sbjct: 351 DVVARGMDFPNITQVVQITGPSNTDDYIHRIGRTGRAGKTGEAYLILLEQEKPFLNSIK 409
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 93.9 bits (223), Expect = 3e-20
Identities = 65/257 (25%), Positives = 127/257 (49%), Gaps = 11/257 (4%)
Frame = -1
Query: 883 GRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHE 704
GR+ +M+ + ++ +++L+LDEAD +++ GF+ + + LP + L SAT+
Sbjct: 141 GRLNEMLSH--ISSKHLEILILDEADTLIDMGFQRTLQSIISQLPKQRRTGLFSATMNDT 198
Query: 703 ILEMTS-KFMTDPIRILVKRDELTLEGIKQFFVAVER----EEWKFDTLCDLYDTLTITQ 539
+ + + +R+ V ++ +A++ +K + L T+ +
Sbjct: 199 VSSFLKIAGLRNSVRVSVTVTSKKIDTRTPSSLAIQSLVIPPIYKVQCMIHLLCTIEYEK 258
Query: 538 AVIFCNTKRKVDWLTQKM--QEANFTVSSMHGDMPQKERDNIMKEFR-SGQSRVLITTDV 368
A++F ++ V++ + F + ++HG Q R ++F+ S + VL TTD+
Sbjct: 259 AIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQSNRSRNFEKFKKSNKKTVLFTTDI 318
Query: 367 WARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAI---NFVKSDDIRILRDIE 197
+RG+D+ V V+ D P + + + HR GR+GR GR GVAI N + ++ L +
Sbjct: 319 ASRGLDIPNVDFVLQLDPPLDPKSFSHRCGRAGRAGRAGVAIVLLNDGREEEYEELLRVR 378
Query: 196 QYYSTQIDEMPMNVADL 146
+ T+ID P+ DL
Sbjct: 379 KVPITRID-TPIEALDL 394
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 78.2 bits (184), Expect = 1e-15
Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 26/240 (10%)
Frame = -1
Query: 883 GRVFDMIRRRVL--RTRSIKMLVLDEADEMLNKGFKEQIYDVYRYL--PPATQ--VVLIS 722
GR++ +I L + IK LVLDEAD +L K E++ + L P TQ + S
Sbjct: 251 GRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSHFEELSKLLEILGNPMHTQRQTFIFS 310
Query: 721 ATLPHEILEMTSKFM--------TDPIRILVKRDELT-----LEGIKQFFVAVEREEWKF 581
AT + + K M P+ ++K L+ Q VA E
Sbjct: 311 ATFDEGLQQRLKKNMKGNITEKYNSPMENMLKEVRFFGKPKFLDANPQSAVASRVLEGLI 370
Query: 580 DTLC---DLYDTLTITQ----AVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDN 422
+ DLY I + ++F N + +T + E +H + QK+R
Sbjct: 371 ECAPAEKDLYLYYLIMRYPGKTMVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQ 430
Query: 421 IMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAI 242
+++F++ VL+ TDV ARGID+ V+ VI+Y +P+ ++Y+HR GR+ R GV+I
Sbjct: 431 SLEKFKNNPKGVLVCTDVAARGIDIPSVTHVIHYHVPHTADMYVHRSGRTARANEDGVSI 490
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 75.4 bits (177), Expect = 1e-14
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Frame = -1
Query: 826 LVLDEADEMLNKG-FKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVK 650
+V+DEA +L G ++ + R + L+SAT P + LEM ++ T V
Sbjct: 1319 VVIDEAHLLLTSGAWRTALSRASRLSGLYAPLHLLSATFPRQ-LEMVAR-QTFCTNFYVL 1376
Query: 649 RDELTL-EGIKQFFVAVEREEWKFDTLCDLYDTLTIT---QAVIFCNTKRKVDWLTQKMQ 482
R+ T E I F + E+ D + T +A+IFC TK+ V+++ +++
Sbjct: 1377 RETSTARENIFYFLHPYDNTEFLLDLRTLMKRTKVFEGDGRAIIFCRTKKDVEYIHRRLH 1436
Query: 481 E----ANFTVSSMHGDMPQKERDNIMKEFR--SGQSRVLITTDVWARGIDVQQVSLVINY 320
+ A+ V+ GD+ +ER FR +G++R++I T + GI+ V LV++Y
Sbjct: 1437 QSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHY 1496
Query: 319 DLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 221
LP + Y+ GR+GR G+ +A F + D
Sbjct: 1497 GLPASSMDYVQETGRAGRDGKYAIAALFYEKYD 1529
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 75.4 bits (177), Expect = 1e-14
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Frame = -1
Query: 826 LVLDEADEMLNKG-FKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVK 650
+V+DEA +L G ++ + R + L+SAT P + LEM ++ T V
Sbjct: 1319 VVIDEAHLLLTSGAWRTALSRASRLSGLYAPLHLLSATFPRQ-LEMVAR-QTFCTNFYVL 1376
Query: 649 RDELTL-EGIKQFFVAVEREEWKFDTLCDLYDTLTIT---QAVIFCNTKRKVDWLTQKMQ 482
R+ T E I F + E+ D + T +A+IFC TK+ V+++ +++
Sbjct: 1377 RETSTARENIFYFLHPYDNTEFLLDLRTLMKRTKVFEGDGRAIIFCRTKKDVEYIHRRLH 1436
Query: 481 E----ANFTVSSMHGDMPQKERDNIMKEFR--SGQSRVLITTDVWARGIDVQQVSLVINY 320
+ A+ V+ GD+ +ER FR +G++R++I T + GI+ V LV++Y
Sbjct: 1437 QSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHY 1496
Query: 319 DLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 221
LP + Y+ GR+GR G+ +A F + D
Sbjct: 1497 GLPASSMDYVQETGRAGRDGKYAIAALFYEKYD 1529
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 73.7 bits (173), Expect = 3e-14
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Frame = -1
Query: 466 VSSMHGDMPQKERDNIMKEFRSGQ---SRVLITTDVWARGIDVQQVSLVINYDLPNNREL 296
V +HG + Q+ R + + F S + S +L+ TDV ARG+D+ V LV+ YD P + +
Sbjct: 470 VYRLHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDD 529
Query: 295 YIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI 143
Y+HRIGR+ R G G AI F+ + + ++ S I E P + L+
Sbjct: 530 YLHRIGRTARAGHNGAAIMFLLPKESEYINLLKSSVSANILEQPNGPSGLL 580
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = -1
Query: 883 GRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP- 710
GR+ D + L ++ +VLDE D +++ GF+E + + YL + ++ ++P
Sbjct: 278 GRLADHLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYLESQSSIIKKDLSIPS 337
Query: 709 HEILEMTSKFMTDPIRIL 656
++ + S M D ++ L
Sbjct: 338 RKVTMLCSATMKDTVKRL 355
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 71.7 bits (168), Expect = 1e-13
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Frame = -1
Query: 832 KMLVLDEADEMLNKGFKEQIYDVYRY-LPPATQVVLISATLPHEILEMTSKFMTDPIRIL 656
K +LD D+ ++ F I + Y LP Q ++ SATL + ++ S + +P +L
Sbjct: 322 KSNILD-LDQNISPTFLPDIDTLLPYRLPSPLQKLVFSATLTRDPSKIASLKLHNPRLVL 380
Query: 655 VKRDELTLEG----------------IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFC 524
V+ ++ ++ ++++ V+V E K L L + +T + F
Sbjct: 381 VQNKDMEVDDGGEIEDDAIVFSVPPTLQEYHVSVSSE--KPILLYHLIHSKNLTNILCFV 438
Query: 523 NTKR---KVDWLTQKMQEA---NFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWA 362
+ ++ L + + E+ +F+ + + ER I+ F +G +L+ +D+ A
Sbjct: 439 KSNEAAARLHRLLELIHESLNQSFSCGLFTSSLSRDERKKIISRFATGDLNLLVCSDLMA 498
Query: 361 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 221
RGIDV VINYD P + Y+HRIGR+ R GR+G A V+S +
Sbjct: 499 RGIDVANTQNVINYDPPLSVRSYVHRIGRTARAGREGFAWTLVQSHE 545
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -1
Query: 883 GRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQI 773
GR+ D IR + ++ +V+DEAD +L++ F++ +
Sbjct: 269 GRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWV 306
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 60.9 bits (141), Expect = 2e-10
Identities = 43/161 (26%), Positives = 76/161 (47%)
Frame = -1
Query: 853 VLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMT 674
VL +K LV+DEAD ML+ G+ E + + R LP TQ L+SATL I +
Sbjct: 159 VLPLDKLKFLVIDEADLMLSFGYNEDMKTLSRSLPRGTQSFLMSATLSKNIASLQKLVCR 218
Query: 673 DPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLT 494
+P IL +D+ + Q+ V ++ L L + +IF N + L
Sbjct: 219 NPF-ILAVKDKEASGKLTQYVVKCSEQDKFLLAYILLKLRLIKGKILIFVNEINRCYRLK 277
Query: 493 QKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTD 371
+++ ++ ++P R +I++++ G +++I TD
Sbjct: 278 LFLEQFGLKSLVLNSELPVNSRLHILEQYNKGLYQIIIATD 318
Score = 58.4 bits (135), Expect = 1e-09
Identities = 23/44 (52%), Positives = 35/44 (79%)
Frame = -1
Query: 364 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV 233
ARG+D + V+ V+N+D+P+N + YIHRIGR+ R G+ G A++FV
Sbjct: 387 ARGLDFENVACVLNFDMPSNTKSYIHRIGRTARAGKPGTAMSFV 430
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 55.2 bits (127), Expect = 1e-08
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = -1
Query: 535 VIFCNTKRKVDWLTQKMQ-EANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWAR 359
+I+C ++ + + K++ + H + + ER I E++SG ++++ T +
Sbjct: 746 IIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGM 805
Query: 358 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 221
G+D V VI++ P + E Y GR+GR G+ I F D
Sbjct: 806 GVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYSYKD 851
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 48.0 bits (109), Expect = 2e-06
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = -1
Query: 445 MPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR 266
M QK ++ +K+F+ G+ LI T + G+D+ +V ++I YD + + R+GR+GR
Sbjct: 476 MSQKLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYDASASPIRMLQRMGRTGR 535
Query: 265 FGRKG 251
RKG
Sbjct: 536 -KRKG 539
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 43.6 bits (98), Expect = 4e-05
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = -1
Query: 481 EANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNR 302
+AN S+ M QKE + +FR+G L+ T + G+D+ ++I YD ++
Sbjct: 506 QANSAYSTGMNQMQQKET---IDQFRAGVINTLVATSIGEEGLDIGDTDMIICYDASSSP 562
Query: 301 ELYIHRIGRSGR 266
I R+GR+GR
Sbjct: 563 IRTIQRMGRTGR 574
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 37.5 bits (83), Expect = 0.003
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = -1
Query: 439 QKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG 260
++++D + K F++G+ VLI T V GIDV +LVI +++ Y+ GR+
Sbjct: 410 RRQKDTLHK-FKTGKYNVLIATAVAEEGIDVPSCNLVIRFNICRTVTQYVQSRGRARAMA 468
Query: 259 RK 254
K
Sbjct: 469 SK 470
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 35.1 bits (77), Expect = 0.013
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = -1
Query: 466 VSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIH 287
+ S +ER I E +G+ +I T+ GID+ + VI P +
Sbjct: 587 IQSYRAGYTVQERRKIESEMFNGKLYGIIATNALELGIDIGSLDAVITIGFPYSLSNLRQ 646
Query: 286 RIGRSGRFGRKGVAINFVKS 227
+ GR+GR + +A+ V++
Sbjct: 647 QFGRAGRRNKSSLAVYIVET 666
>SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 606
Score = 30.7 bits (66), Expect = 0.29
Identities = 17/93 (18%), Positives = 39/93 (41%)
Frame = -1
Query: 544 TQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVW 365
+ ++FC + ++ ++ G+ ER+ ++++FR + VL+ V
Sbjct: 266 SSTLVFCINVEHSLKVCNAFRKLGIDARALFGETNDSERETLIQDFRKKKFPVLVNCMVL 325
Query: 364 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR 266
G D+ + ++ ++ L IGR R
Sbjct: 326 TEGTDIPNIDCLMIARPTSSPNLLTQMIGRGLR 358
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -1
Query: 730 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 551
LIS TL + + F+ D + L K D+ +EG ++++ E+ + C LY TL
Sbjct: 1024 LISLTLKDSDVCVIYNFVDDLVIFLKKCDKTLIEGFVLPILSIKIEKSLYKGFCYLYLTL 1083
Query: 550 TI 545
+
Sbjct: 1084 KV 1085
>SPAC25A8.01c ||snf2SR|fun thirty related protein
Fft3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 922
Score = 28.7 bits (61), Expect = 1.2
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Frame = -1
Query: 541 QAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSR--VLITTDV 368
+ V+F + +D L M+ N G R +++ +F + +S L++T
Sbjct: 779 RVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQFYADESINVFLLSTKA 838
Query: 367 WARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKG--VAINFVKSDDI 218
GI++ ++VI YD+ N + R+ R G+K FV D I
Sbjct: 839 GGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTI 890
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 28.3 bits (60), Expect = 1.5
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 826 LVLDEADEMLNKGFKEQIYDVYRYLPPATQ 737
+V D+ D+ ++ E + ++RYLPP +
Sbjct: 495 IVTDDIDDKKDRALSEHVLRMHRYLPPGVE 524
>SPCC16C4.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 266
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/79 (21%), Positives = 33/79 (41%)
Frame = -1
Query: 814 EADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELT 635
E E + + + I +YRY + L + LP + S +T+P++ ++
Sbjct: 94 ENSEFTKENYAQMINSLYRYQDAILKSELKDSILPKLVNCACSVQLTEPLKAILANSRGE 153
Query: 634 LEGIKQFFVAVEREEWKFD 578
LE + + EE K +
Sbjct: 154 LENSLLLRIQAQEEELKMN 172
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 245 GDTLTTESTRSTNSVNVQLTIVGQVIVYNQGYLLDINASCPDVSCNENTALTRTKFLHNV 424
G T+ T+ R + + + + GQ+I +N +L+ P V+C NT + +T L +
Sbjct: 143 GQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACG-NTIILKTAELTPL 201
Query: 425 VSLFL 439
+L L
Sbjct: 202 SALCL 206
>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
Utp5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 666
Score = 27.1 bits (57), Expect = 3.5
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Frame = +2
Query: 149 VSHIHWHF--IYLSRVVLFNVSQDPDVI*FNEVDGDTLTTE----STRSTNSVNVQLTIV 310
+S I W +Y S + ++S +++ G+ L S T S + I+
Sbjct: 65 ISCIAWEQKPLYASEQITTDISGSGEILVLGTNSGEILIYSEHLGSLTRTYSFGILQKII 124
Query: 311 GQVIVYNQGYLLDINASCPDVSCNENTALTRTKF 412
G ++ N G+ +DI V + NT RT F
Sbjct: 125 GAHVLANDGFAIDITGKV--VCFSVNTGEVRTSF 156
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -1
Query: 862 RRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 749
RR L+ I V +A + ++ G + D YRY P
Sbjct: 458 RRSALKFTDIDYFVFSDASKYVSIGMSPYMRDTYRYTP 495
>SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 521 ITKYYCLGNCQCIIEVTKCVK 583
+ ++ CL NC + +TKCVK
Sbjct: 139 LEEFSCLANCNGLRTITKCVK 159
>SPAC1786.01c ||SPAC31G5.20c|triacylglycerol
lipase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -1
Query: 595 EEWKFDTLCDLYDTLTITQAVIFCNTKRK--VDW 500
+EWK D + D YD T+ QAV K + DW
Sbjct: 143 DEWKLDPVYDYYD-YTLVQAVYSSLVKHREQKDW 175
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 583 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHG 449
F +C +Y ++T + ++ TKR L + ANFT +S G
Sbjct: 457 FSLVCVVYYSITPLRNLVGFTTKRSGKNLANRFFTANFTPTSKTG 501
>SPAC821.05 |||translation initiation factor
eIF3h|Schizosaccharomyces pombe|chr 1|||Manual
Length = 357
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 446 VTMH*TDSEVCLLHLLCEPVNLPLCITKYYCLGNCQCIIEVTK 574
+ +H + CLLH L EP +T L +C+ + +T+
Sbjct: 192 IVIHNSHLATCLLHSLSEPPTPASTLTAEAALEDCESNLPLTE 234
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,651,633
Number of Sequences: 5004
Number of extensions: 76459
Number of successful extensions: 237
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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