Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc12e20
         (442 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.079
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   5.2  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   5.2  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   5.2  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   5.2  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   5.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    20   9.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   9.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.1 bits (57), Expect = 0.079
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -2

Query: 201  PESTSSIPPATFQLLPSIPYCTTTS 127
            P+++S++ P+T  ++P  P  TTTS
Sbjct: 2286 PDASSTMAPSTTPMVPDKPVTTTTS 2310


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 128 QDGS*GQQNCSSLCIYSS 75
           QD   GQ+NC  L IY++
Sbjct: 89  QDYVIGQENCLYLTIYTT 106


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 128 QDGS*GQQNCSSLCIYSS 75
           QD   GQ+NC  L IY++
Sbjct: 89  QDYVIGQENCLYLTIYTT 106


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 128 QDGS*GQQNCSSLCIYSS 75
           QD   GQ+NC  L IY++
Sbjct: 89  QDYVIGQENCLYLTIYTT 106


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 128 QDGS*GQQNCSSLCIYSS 75
           QD   GQ+NC  L IY++
Sbjct: 89  QDYVIGQENCLYLTIYTT 106


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 128 QDGS*GQQNCSSLCIYSS 75
           QD   GQ+NC  L IY++
Sbjct: 89  QDYVIGQENCLYLTIYTT 106


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +2

Query: 290 LVCGHDDVFN 319
           ++CG  D+FN
Sbjct: 326 VICGESDIFN 335


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 280 DYKVKIADNNLVTHKEL 230
           DY+ K+A    + H+EL
Sbjct: 146 DYRAKLAQIRQIYHQEL 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,450
Number of Sequences: 336
Number of extensions: 1417
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)