Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12e12
(391 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF283269-1|AAG15374.1| 114|Anopheles gambiae ribosomal protein ... 199 3e-53
AY341235-1|AAR13799.1| 196|Anopheles gambiae transferrin-like p... 26 0.56
AY341234-1|AAR13798.1| 196|Anopheles gambiae transferrin-like p... 26 0.56
AY341233-1|AAR13797.1| 196|Anopheles gambiae transferrin-like p... 26 0.56
AY341232-1|AAR13796.1| 196|Anopheles gambiae transferrin-like p... 26 0.56
AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein p... 25 0.74
U43499-1|AAA93302.1| 278|Anopheles gambiae a-emp protein. 23 5.2
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 5.2
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 5.2
AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease pr... 22 6.9
AY341149-1|AAR13713.1| 164|Anopheles gambiae aminopeptidase N p... 22 9.1
AY341147-1|AAR13711.1| 164|Anopheles gambiae aminopeptidase N p... 22 9.1
AY341146-1|AAR13710.1| 164|Anopheles gambiae aminopeptidase N p... 22 9.1
AJ973476-1|CAJ01523.1| 126|Anopheles gambiae hypothetical prote... 22 9.1
AJ697729-1|CAG26922.1| 126|Anopheles gambiae putative sensory a... 22 9.1
>AF283269-1|AAG15374.1| 114|Anopheles gambiae ribosomal protein S26
protein.
Length = 114
Score = 199 bits (485), Expect = 3e-53
Identities = 90/112 (80%), Positives = 101/112 (90%)
Frame = -1
Query: 337 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQ 158
+RRNGGR KH RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+DASVY +
Sbjct: 3 ERRNGGRCKHNRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYV 62
Query: 157 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPPGSAKE 2
LPKLYAKLHYCVSCAIHSKVVRNRSK+ RRIRTPP+ +FP+DM+R + ++
Sbjct: 63 LPKLYAKLHYCVSCAIHSKVVRNRSKETRRIRTPPQRSFPKDMNRQQNAQRK 114
>AY341235-1|AAR13799.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 25.8 bits (54), Expect = 0.56
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = -1
Query: 313 KHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDIND 182
K G+GH + + N C P+ I N+ + + D N+
Sbjct: 50 KEGKGHDRFEKLRNAKACFPEFGGIASIAFVNVGRSRGIFDRNE 93
>AY341234-1|AAR13798.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 25.8 bits (54), Expect = 0.56
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = -1
Query: 313 KHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDIND 182
K G+GH + + N C P+ I N+ + + D N+
Sbjct: 50 KEGKGHDRFEKLRNAKACFPEFGGIASIAFVNVGRSRGIFDRNE 93
>AY341233-1|AAR13797.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 25.8 bits (54), Expect = 0.56
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = -1
Query: 313 KHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDIND 182
K G+GH + + N C P+ I N+ + + D N+
Sbjct: 50 KEGKGHDRFEKLRNAKACFPEFGGIASIAFVNVGRSRGIFDRNE 93
>AY341232-1|AAR13796.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 25.8 bits (54), Expect = 0.56
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = -1
Query: 313 KHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDIND 182
K G+GH + + N C P+ I N+ + + D N+
Sbjct: 50 KEGKGHDRFEKLRNAKACFPEFGGIASIAFVNVGRSRGIFDRNE 93
>AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein
protein.
Length = 298
Score = 25.4 bits (53), Expect = 0.74
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 379 RSLFTGSEVRNMTRKRRNGGRAKHGRGHVKAVRCTNCARCV 257
R L G VR R+ + G + KAV CTN +C+
Sbjct: 238 RCLERGHMVRECQGTNRSSLCIRCGAANHKAVNCTNDVKCL 278
>U43499-1|AAA93302.1| 278|Anopheles gambiae a-emp protein.
Length = 278
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 75 TEESVLLPRVTSLGTCHVHQ 16
T+ S+ PR+T T HV++
Sbjct: 176 TDGSIFPPRITKNSTLHVYE 195
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 22.6 bits (46), Expect = 5.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 107 QQSCQEQIEERQKNPYSSQ 51
QQ Q+Q ++RQ+ P S Q
Sbjct: 254 QQLSQQQQQQRQRQPSSQQ 272
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 22.6 bits (46), Expect = 5.2
Identities = 16/75 (21%), Positives = 32/75 (42%)
Frame = -1
Query: 271 CARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVR 92
CA V K + + ++ IR + + DI ASV+ + Y + + +
Sbjct: 808 CATTVRKGRKLYQYTIRLPINSPWKEDILIASVFNECRPDAETVAYLYHIRMELICPIPE 867
Query: 91 NRSKKDRRIRTPPKS 47
++ + R+I P +S
Sbjct: 868 EQNTRGRKIYAPEES 882
>AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease
protein.
Length = 375
Score = 22.2 bits (45), Expect = 6.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 6 FALPGGRDMSLGKLLLGGVR 65
F +P G + LG + GG+R
Sbjct: 293 FQVPSGVGVGLGHICAGGIR 312
>AY341149-1|AAR13713.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 164 HWVYRGIVNISDRRRFYDVPNH 229
H++YRG V SDR + + H
Sbjct: 61 HFLYRGSVVTSDRTWWIPITYH 82
>AY341147-1|AAR13711.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 164 HWVYRGIVNISDRRRFYDVPNH 229
H++YRG V SDR + + H
Sbjct: 61 HFLYRGSVVTSDRTWWIPITYH 82
>AY341146-1|AAR13710.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 164 HWVYRGIVNISDRRRFYDVPNH 229
H++YRG V SDR + + H
Sbjct: 61 HFLYRGSVVTSDRTWWIPITYH 82
>AJ973476-1|CAJ01523.1| 126|Anopheles gambiae hypothetical protein
protein.
Length = 126
Score = 21.8 bits (44), Expect = 9.1
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 277 TNCARCVPKDKAIKKFVIRNIVE 209
T+CA+C K K+ + VI +++
Sbjct: 70 TDCAKCSEKQKSGTEKVINYLID 92
>AJ697729-1|CAG26922.1| 126|Anopheles gambiae putative sensory
appendage protein SAP-3 protein.
Length = 126
Score = 21.8 bits (44), Expect = 9.1
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 277 TNCARCVPKDKAIKKFVIRNIVE 209
T+CA+C K K+ + VI +++
Sbjct: 70 TDCAKCSEKQKSGTEKVINYLID 92
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 393,938
Number of Sequences: 2352
Number of extensions: 7347
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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