Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc12e09
         (185 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    23   1.3  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        21   6.8  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        21   6.8  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        21   6.8  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        21   6.8  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    21   6.8  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           21   6.8  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    20   9.1  
AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    20   9.1  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    20   9.1  

>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 167 ILLGFYFTILQAYEYIEASFTIADRIYGSTFF 72
           +++  YFT+L     +  SF + +R    TFF
Sbjct: 58  LIINGYFTVLYFNLVLRTSFLVINRRKFETFF 89


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 43  VIIGTLFLLICY 8
           +IIG L +L CY
Sbjct: 166 IIIGGLLMLFCY 177


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 43  VIIGTLFLLICY 8
           +IIG L +L CY
Sbjct: 166 IIIGGLLMLFCY 177


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 43  VIIGTLFLLICY 8
           +IIG L +L CY
Sbjct: 166 IIIGGLLMLFCY 177


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 43  VIIGTLFLLICY 8
           +IIG L +L CY
Sbjct: 166 IIIGGLLMLFCY 177


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 43  VIIGTLFLLICY 8
           +IIG L +L CY
Sbjct: 742 IIIGGLLMLFCY 753


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 60   PDCYEKSGSINSISNCK 110
            P+C     + +++SNCK
Sbjct: 1262 PNCPRNCDNYDTVSNCK 1278


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 98   DRIYGSTFFIAIRISW 51
            DRI+   FF+ + I W
Sbjct: 1343 DRIFTVIFFLEMLIKW 1358


>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
           responsive shortpeptide protein.
          Length = 81

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 84  SINSISNCKRSF 119
           +INS  +CKR F
Sbjct: 57  TINSCEDCKRKF 68


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 57  NPDCYEKSGSINSISN 104
           +PDC   +GS+ S+++
Sbjct: 949 SPDCPRCAGSVESVAH 964


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,166
Number of Sequences: 2352
Number of extensions: 1901
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 40
effective length of database: 469,899
effective search space used:  9867879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)