Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc12e09
         (185 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030141-1|ABN49280.1|  374|Drosophila melanogaster IP17450p pro...    30   0.49 
AY118634-1|AAM50003.1|  601|Drosophila melanogaster RH60839p pro...    28   1.5  
AY089573-1|AAL90311.1|  587|Drosophila melanogaster RE09178p pro...    28   1.5  
AE014298-1040|AAF46260.2|  601|Drosophila melanogaster CG9657-PA...    28   1.5  
AE014297-1292|AAF54633.1|  587|Drosophila melanogaster CG6723-PA...    28   1.5  
BT024314-1|ABC86376.1|  463|Drosophila melanogaster IP11471p pro...    27   3.5  
AY058605-1|AAL13834.1|  585|Drosophila melanogaster LD29807p pro...    26   8.0  
AE014134-1406|AAF52606.2|  585|Drosophila melanogaster CG8668-PA...    26   8.0  

>BT030141-1|ABN49280.1|  374|Drosophila melanogaster IP17450p
           protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 0.49
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -1

Query: 179 LFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIAIRISW 51
           +FL +      T    YEY E  F  + R+ GS FF    + W
Sbjct: 215 IFLPVFCNLQLT--STYEYFEMRFNKSVRLLGSAFFTGANLIW 255


>AY118634-1|AAM50003.1|  601|Drosophila melanogaster RH60839p
           protein.
          Length = 601

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 143 ILQAYEYIEASFTIADRIYGSTFFIAIRISW 51
           ++  Y+Y+E  +  + R++GS  FI   + W
Sbjct: 128 LISTYKYLEQRYNRSLRLFGSVMFIVASLLW 158


>AY089573-1|AAL90311.1|  587|Drosophila melanogaster RE09178p
           protein.
          Length = 587

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 143 ILQAYEYIEASFTIADRIYGSTFFIAIRISW 51
           I   YEY+E  F    R+YGS  F  + +++
Sbjct: 115 ITSTYEYLEVRFDRRLRLYGSVMFAIMNVAY 145


>AE014298-1040|AAF46260.2|  601|Drosophila melanogaster CG9657-PA
           protein.
          Length = 601

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 143 ILQAYEYIEASFTIADRIYGSTFFIAIRISW 51
           ++  Y+Y+E  +  + R++GS  FI   + W
Sbjct: 128 LISTYKYLEQRYNRSLRLFGSVMFIVASLLW 158


>AE014297-1292|AAF54633.1|  587|Drosophila melanogaster CG6723-PA
           protein.
          Length = 587

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 143 ILQAYEYIEASFTIADRIYGSTFFIAIRISW 51
           I   YEY+E  F    R+YGS  F  + +++
Sbjct: 115 ITSTYEYLEVRFDRRLRLYGSVMFAIMNVAY 145


>BT024314-1|ABC86376.1|  463|Drosophila melanogaster IP11471p
           protein.
          Length = 463

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 131 YEYIEASFTIADRIYGSTFFIAIRISW 51
           YEY E  F+   R++G++ F+   I W
Sbjct: 1   YEYFERRFSRRMRLFGASLFVLKAIIW 27


>AY058605-1|AAL13834.1|  585|Drosophila melanogaster LD29807p
           protein.
          Length = 585

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 74  FIAIRISWNSCNNWNFISINLLYS 3
           F+  RIS+N CN  N IS++++ S
Sbjct: 544 FVNRRISFNPCNIRNAISVHMIKS 567


>AE014134-1406|AAF52606.2|  585|Drosophila melanogaster CG8668-PA
           protein.
          Length = 585

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 74  FIAIRISWNSCNNWNFISINLLYS 3
           F+  RIS+N CN  N IS++++ S
Sbjct: 544 FVNRRISFNPCNIRNAISVHMIKS 567


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,097,670
Number of Sequences: 53049
Number of extensions: 79216
Number of successful extensions: 222
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 24,988,368
effective HSP length: 42
effective length of database: 22,760,310
effective search space used: 432445890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)