Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12e08
(838 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 26 0.43
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 25 0.98
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 24 1.7
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 24 1.7
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 24 1.7
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 23 2.3
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 3.0
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 23 4.0
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 22 5.2
DQ855499-1|ABH88186.1| 124|Tribolium castaneum chemosensory pro... 22 5.2
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 22 5.2
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 22 5.2
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 22 6.9
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 9.1
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 21 9.1
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 25.8 bits (54), Expect = 0.43
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 802 NDIYDLSKNTWNCRFNRCIKRKVEHQ 725
ND +++ + TW C +C+K VE +
Sbjct: 37 ND-FEVQRYTWKCENQKCVKYLVEDE 61
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 24.6 bits (51), Expect = 0.98
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 218 TKKQSHNHHGEHQVWRRRH 162
T Q+H+HH H + + H
Sbjct: 317 TNNQNHHHHAGHHIHAQHH 335
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 121 AAKLTSFMFGHVATFVIVFIVILFLYCMV 35
A +LT +FG V + + VI+F Y +
Sbjct: 214 AHELTYLLFGMVMMYALPLAVIIFSYASI 242
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 742 RKVEHQVKKRPPTWRHNVRAKY 677
RKV H + K P W + AK+
Sbjct: 84 RKVLHHLIKNKPNWWQELEAKF 105
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 121 AAKLTSFMFGHVATFVIVFIVILFLYCMV 35
A +LT +FG V + + VI+F Y +
Sbjct: 214 AHELTYLLFGMVMMYALPLAVIIFSYASI 242
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 23.4 bits (48), Expect = 2.3
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 79 FVIVFIVILFLYCMV 35
F+I I++L LYC++
Sbjct: 246 FIIPLIILLILYCII 260
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 505 SNARPPWPRKLSGRAAYCLSC*YAHASAQCSFSANRFRTS 624
S+ P +LSG ++C A+ S NRF TS
Sbjct: 382 SSVSKPEALRLSGSVVTKVTCELFQATLSSSSDTNRFGTS 421
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 22.6 bits (46), Expect = 4.0
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -1
Query: 664 TATKGDLMHIQEELMYENDLLKMNIELMHAHINKINNM-LHDLIVSVAKVDERLIGNLMN 488
T+ GD++++ +NDL +N+ + I+ + N+ L + ++ + L
Sbjct: 446 TSVVGDMLNMNWNPSAQNDLSGVNLSETPSGISSLLNLDNQQLELKPIDLNSGDLSMLET 505
Query: 487 NSVSSTF 467
N++S TF
Sbjct: 506 NNLSETF 512
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 22.2 bits (45), Expect = 5.2
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 742 RKVEHQVKKRPPTWRHNVRAKY-TEGDTATKGDLMHIQEEL 623
RKV H + + P W + +K+ +G+ K D + +E L
Sbjct: 84 RKVIHHLIENKPNWWQELESKFDPQGEYKKKYDELLKKEGL 124
>DQ855499-1|ABH88186.1| 124|Tribolium castaneum chemosensory
protein 13 protein.
Length = 124
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 742 RKVEHQVKKRPPTWRHNVRAKY 677
RKV H + K+ P W ++ K+
Sbjct: 82 RKVIHYLVKQKPEWWEQLQKKF 103
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 22.2 bits (45), Expect = 5.2
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 742 RKVEHQVKKRPPTWRHNVRAKY-TEGDTATKGDLMHIQEEL 623
RKV H + + P W + +K+ +G+ K D + +E L
Sbjct: 84 RKVIHHLIENKPNWWQELESKFDPQGEYKKKYDELLKKEGL 124
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 22.2 bits (45), Expect = 5.2
Identities = 18/69 (26%), Positives = 25/69 (36%)
Frame = -1
Query: 439 PCTNPPAHTSNCYNNSIYKEGRWVANTDSSQCIDFSNYKELAIDDDVEFWIPTIGNTTYH 260
P + T+NCYNN Y ++ + F N E + W G +
Sbjct: 241 PVLSTTNSTTNCYNNYPYYSNMDYLSSSTMSHSQFGNGLETS-------W----GKSRDE 289
Query: 259 DSWKDASGW 233
SW SGW
Sbjct: 290 SSWFYNSGW 298
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +1
Query: 370 PNALLCKCCCCSNYWCVPADWCTASAKTCRPTK 468
P CK C ++ + D TAS+ RP K
Sbjct: 11 PGVNRCKLLSCKDFDTLYRDCTTASSWPGRPPK 43
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 555 LFILLICAC 581
LFIL ICAC
Sbjct: 8 LFILAICAC 16
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 21.4 bits (43), Expect = 9.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2
Query: 741 VKSSTKSRNGHPLGATTLEPSTQKETLPPKAT 646
+K S NG+P +L + ETL K T
Sbjct: 16 IKKSYSIENGYPARRRSLVDDARFETLVVKQT 47
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,668
Number of Sequences: 336
Number of extensions: 4604
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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