Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc12e04
         (864 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   9.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   9.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.4  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 809 KEXITPLKPMFKVVNGVTCV 750
           K  ++PLK +  V+ G TC+
Sbjct: 25  KLTLSPLKVLQTVILGTTCI 44


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 809 KEXITPLKPMFKVVNGVTCV 750
           K  ++PLK +  V+ G TC+
Sbjct: 25  KLTLSPLKVLQTVILGTTCI 44


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 546 FFIANFITN 520
           FF+ANF+TN
Sbjct: 245 FFLANFLTN 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,115
Number of Sequences: 336
Number of extensions: 3638
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)