Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12d23
(741 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep: ... 256 3e-67
UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum nucleopolyh... 243 4e-63
UniRef50_Q8QLL0 Cluster: BRO-b; n=2; Nucleopolyhedrovirus|Rep: B... 189 5e-47
UniRef50_Q99GY7 Cluster: Bro; n=27; root|Rep: Bro - Helicoverpa ... 183 5e-45
UniRef50_Q4KT25 Cluster: BRO-A; n=3; root|Rep: BRO-A - Chrysodei... 175 7e-43
UniRef50_O55569 Cluster: P20; n=5; Nucleopolyhedrovirus|Rep: P20... 118 1e-25
UniRef50_Q287E9 Cluster: BRO-D; n=3; unclassified Nucleopolyhedr... 90 6e-17
UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Re... 85 2e-15
UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing... 83 9e-15
UniRef50_Q9YML3 Cluster: Uncharacterized Bro-N domain-containing... 73 7e-12
UniRef50_A4KX99 Cluster: Bro6; n=1; Heliothis virescens ascoviru... 65 2e-09
UniRef50_Q0IL61 Cluster: Bro-e; n=1; Leucania separata nuclear p... 64 3e-09
UniRef50_Q6VZI7 Cluster: CNPV160 N1R/p28-like protein; n=11; Avi... 54 4e-06
UniRef50_Q9PYR4 Cluster: ORF131; n=1; Xestia c-nigrum granulovir... 51 3e-05
UniRef50_Q6VZC0 Cluster: CNPV227 N1R/p28-like protein; n=3; Cana... 51 3e-05
UniRef50_Q6VZH8 Cluster: CNPV169 N1R/p28-like protein; n=2; Cana... 50 5e-05
UniRef50_O10320 Cluster: Putative uncharacterized protein; n=1; ... 50 6e-05
UniRef50_Q9E231 Cluster: Orf60-like protien; n=14; Baculoviridae... 47 4e-04
UniRef50_Q919G9 Cluster: CUN108 putative bro protein, ATP_GTP_A ... 46 0.001
UniRef50_A5I4G4 Cluster: BRO family protein; n=1; Clostridium bo... 44 0.005
UniRef50_A5IZQ5 Cluster: Bro-2; n=1; Spodoptera litura granulovi... 43 0.009
UniRef50_A4XBY6 Cluster: BRO domain protein domain protein; n=2;... 43 0.009
UniRef50_A5MYH6 Cluster: Predicted prophage antirepressor; n=1; ... 42 0.016
UniRef50_A4KXK3 Cluster: Bro17; n=2; Heliothis virescens ascovir... 40 0.049
UniRef50_Q0I4I5 Cluster: Putative uncharacterized protein; n=2; ... 40 0.049
UniRef50_A3HNE6 Cluster: BRO domain protein domain protein; n=1;... 40 0.049
UniRef50_Q5UP83 Cluster: Putative KilA-N domain-containing prote... 40 0.049
UniRef50_Q96258 Cluster: AR791; n=2; Arabidopsis thaliana|Rep: A... 40 0.085
UniRef50_Q3Y2L0 Cluster: BRO, N-terminal; n=1; Enterococcus faec... 39 0.11
UniRef50_A4P0J2 Cluster: Possible prophage antirepressor; n=1; H... 39 0.11
UniRef50_Q919R4 Cluster: CUN001 putative bro protein, ATP_GTP_A ... 39 0.15
UniRef50_Q629R8 Cluster: Polysaccharide deacetylase family prote... 38 0.20
UniRef50_Q30XK5 Cluster: Prophage antirepressor-like; n=2; Desul... 38 0.20
UniRef50_P44189 Cluster: Uncharacterized protein HI1418; n=8; Pa... 38 0.20
UniRef50_Q7N339 Cluster: Similar to bacteriophage protein; n=2; ... 38 0.34
UniRef50_Q1J4V4 Cluster: Phage antirepressor protein; n=1; Strep... 38 0.34
UniRef50_A6LVQ3 Cluster: Prophage antirepressor; n=3; root|Rep: ... 38 0.34
UniRef50_A1AN22 Cluster: BRO domain protein domain protein; n=1;... 38 0.34
UniRef50_A0RLT8 Cluster: Antirepressor, phage associated; n=3; B... 38 0.34
UniRef50_Q3SVF1 Cluster: Putative uncharacterized protein; n=2; ... 37 0.45
UniRef50_A7LYR8 Cluster: Putative uncharacterized protein; n=2; ... 37 0.45
UniRef50_A6PK75 Cluster: BRO domain protein; n=1; Victivallis va... 37 0.45
UniRef50_UPI0000397D5D Cluster: COG3617: Prophage antirepressor;... 37 0.60
UniRef50_A0A7D8 Cluster: Prophage antirepressor; n=1; Cyanophage... 37 0.60
UniRef50_Q9TM34 Cluster: DNA-directed RNA polymerase subunit bet... 37 0.60
UniRef50_Q5F6A8 Cluster: Putative uncharacterized protein; n=2; ... 36 0.79
UniRef50_Q2L2E4 Cluster: Phage protein; n=1; Bordetella avium 19... 36 0.79
UniRef50_A7IY79 Cluster: Putative antirepressor; n=1; Corynebact... 36 0.79
UniRef50_A4TYQ8 Cluster: BRO, N-terminal; n=1; Magnetospirillum ... 36 1.0
UniRef50_A1SY75 Cluster: Diguanylate cyclase/phosphodiesterase; ... 36 1.0
UniRef50_A6N1W8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_UPI000023F41C Cluster: hypothetical protein FG09272.1; ... 36 1.4
UniRef50_A3IXM9 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A3DG82 Cluster: BRO-like protein; n=1; Clostridium ther... 36 1.4
UniRef50_Q7RZP2 Cluster: Predicted protein; n=1; Neurospora cras... 36 1.4
UniRef50_Q47GU8 Cluster: Secretion protein HlyD; n=1; Dechloromo... 35 1.8
UniRef50_A6NXW4 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_Q5UP77 Cluster: Uncharacterized Bro-N domain-containing... 35 1.8
UniRef50_UPI00005A9715 Cluster: PREDICTED: similar to ankyrin re... 35 2.4
UniRef50_Q84IK9 Cluster: Antirepressor protein; n=1; Clostridium... 35 2.4
UniRef50_Q7Q8A9 Cluster: ENSANGP00000011098; n=2; Culicidae|Rep:... 35 2.4
UniRef50_Q4PBB0 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_A5DQ83 Cluster: Predicted protein; n=1; Pichia guillier... 35 2.4
UniRef50_UPI00006CE95F Cluster: Viral A-type inclusion protein r... 34 3.2
UniRef50_A4KXK8 Cluster: Bro20; n=1; Heliothis virescens ascovir... 34 3.2
UniRef50_Q9PAJ2 Cluster: Phage-related protein; n=22; Gammaprote... 34 3.2
UniRef50_Q8R8M0 Cluster: Membrane proteins related to metalloend... 34 3.2
UniRef50_Q0B1F4 Cluster: Beta-lactamase domain protein; n=1; Bur... 34 3.2
UniRef50_A4TY81 Cluster: Putative uncharacterized protein; n=1; ... 34 3.2
UniRef50_A3M6B7 Cluster: Putative uncharacterized protein; n=1; ... 34 3.2
UniRef50_Q757P9 Cluster: AEL037Cp; n=1; Eremothecium gossypii|Re... 34 3.2
UniRef50_O01761 Cluster: Muscle M-line assembly protein unc-89; ... 34 3.2
UniRef50_UPI000023E3E4 Cluster: hypothetical protein FG02793.1; ... 34 4.2
UniRef50_Q89ZN5 Cluster: RNA-directed DNA polymerase; n=5; Bacte... 34 4.2
UniRef50_Q826G9 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_Q0LH86 Cluster: Band 7 protein; n=1; Herpetosiphon aura... 34 4.2
UniRef50_A7A2N3 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_A3DFZ3 Cluster: BRO-like protein; n=1; Clostridium ther... 34 4.2
UniRef50_A2U920 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_Q68Y46 Cluster: Unknow protein; n=4; Oryza sativa|Rep: ... 34 4.2
UniRef50_Q4H4B6 Cluster: Scribble1; n=16; Euteleostomi|Rep: Scri... 33 5.6
UniRef50_Q81ZL2 Cluster: SMC protein; n=4; Coxiella burnetii|Rep... 33 5.6
UniRef50_Q6NK48 Cluster: Putative anti-repressor protein; n=3; C... 33 5.6
UniRef50_Q1NM38 Cluster: Response regulator receiver precursor; ... 33 5.6
UniRef50_A5V9T8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_A3QSE3 Cluster: Putative antirepressor; n=1; Clostridiu... 33 5.6
UniRef50_Q9Y005 Cluster: Lamin; n=1; Priapulus caudatus|Rep: Lam... 33 5.6
UniRef50_A2E9D7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_O94317 Cluster: Sequence orphan; n=1; Schizosaccharomyc... 33 5.6
UniRef50_Q5V6I5 Cluster: Bacterio-opsin activator-like protein; ... 33 5.6
UniRef50_Q9UPT6 Cluster: C-jun-amino-terminal kinase-interacting... 33 5.6
UniRef50_Q92FM4 Cluster: Lin0080 protein; n=14; root|Rep: Lin008... 33 7.4
UniRef50_Q1Q4M1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_A4J193 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_A5YK15 Cluster: Gp47; n=3; unclassified Siphoviridae|Re... 33 7.4
UniRef50_Q9YMQ6 Cluster: Ld-bro-c; n=6; dsDNA viruses, no RNA st... 33 9.7
UniRef50_Q4KT11 Cluster: BRO-B; n=2; Nucleopolyhedrovirus|Rep: B... 33 9.7
UniRef50_Q9AAB9 Cluster: HlyD family secretion protein; n=1; Cau... 33 9.7
UniRef50_Q97TJ9 Cluster: Membrane protein; n=1; Clostridium acet... 33 9.7
UniRef50_Q89Q49 Cluster: Bll3281 protein; n=4; Proteobacteria|Re... 33 9.7
UniRef50_Q47HX8 Cluster: BRO, N-terminal; n=1; Dechloromonas aro... 33 9.7
UniRef50_Q3W8C4 Cluster: Regulatory protein, LuxR; n=1; Frankia ... 33 9.7
UniRef50_Q3R2M5 Cluster: BRO, N-terminal; n=8; Xylella fastidios... 33 9.7
UniRef50_Q29XV9 Cluster: Possible RNAase; n=17; Campylobacter|Re... 33 9.7
UniRef50_A7DK69 Cluster: Efflux transporter, RND family, MFP sub... 33 9.7
UniRef50_A6CD54 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_A3L404 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_A1HPR4 Cluster: Histidine kinase; n=1; Thermosinus carb... 33 9.7
UniRef50_A0TWB4 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
>UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep:
BRO-B - Clanis bilineata nucleopolyhedrosis virus
Length = 339
Score = 256 bits (628), Expect = 3e-67
Identities = 136/234 (58%), Positives = 171/234 (73%), Gaps = 18/234 (7%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANAD- 565
LIMKSKLPYA+ELQ WLLEEVIPQVLCTGKYAPAVEMDT+ +KI + T K +A D
Sbjct: 97 LIMKSKLPYAVELQAWLLEEVIPQVLCTGKYAPAVEMDTDIQESKILN-TYKQDIAEKDE 155
Query: 564 --------LAEANRSLILFANEMIVARRDVETAR-------QDCEXARRETAQLANRMAD 430
L E N+ ++ FAN +IVA ++ TA Q+ A + +ANRMAD
Sbjct: 156 KIQNLTTVLIETNQQVVKFANALIVANENLITANNNLNVANQNLHEANQTIGHMANRMAD 215
Query: 429 IAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGFN--DVIFSSDYXP 256
IAQDVIAKPS+PQL HSLAVC +G +++AFLRPQKRSL RSL RL + D++F SDY P
Sbjct: 216 IAQDVIAKPSDPQLLHSLAVCSLGGDQYAFLRPQKRSLQRSLNRLSVDERDIVFKSDYVP 275
Query: 255 NSMNVXNKVKEAIPRNKFKAKHNRITLLEDYTREELMNVIGSTMTDRQIARMNS 94
N++NV NKVKE +PR+KFKAKHN+ITLL++ TRE+L+ + ++MT+RQIAR S
Sbjct: 276 NAVNVLNKVKETLPRDKFKAKHNKITLLDNLTREQLVEAVQASMTERQIARQFS 329
>UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: BRO-A - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 324
Score = 243 bits (594), Expect = 4e-63
Identities = 124/215 (57%), Positives = 166/215 (77%), Gaps = 3/215 (1%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADL 562
LIMKSKLPYA+ELQEWLLEEVIPQVLCTGKY PAV + ++ ++K +++ K++ L
Sbjct: 113 LIMKSKLPYAVELQEWLLEEVIPQVLCTGKYQPAVA-NNSECLSKSNEMILKMS-QELIL 170
Query: 561 AEANRSLILFANEMIVARRDVETARQDCEXARRETAQLANRMADIAQDVIAKPSNPQLCH 382
A+ N ++ EMIVARRD ETAR+D L+ R+ADIAQDVI KPSNPQL H
Sbjct: 171 AKQNSDAMI--QEMIVARRDAETARRDM-------VVLSTRIADIAQDVITKPSNPQLLH 221
Query: 381 SLAVCDVGNNEFAFLRPQKRSLGRS---LKRLGFNDVIFSSDYXPNSMNVXNKVKEAIPR 211
+LAVC++GNNEFAFLRPQKRSL RS L+R G D+++++DY PNSMNV NKVKE +P+
Sbjct: 222 TLAVCEIGNNEFAFLRPQKRSLQRSLNNLRRNGQADLVYANDYVPNSMNVLNKVKEHVPK 281
Query: 210 NKFKAKHNRITLLEDYTREELMNVIGSTMTDRQIA 106
+KFKAK+N+ITLL++Y +++L+ +I ++T RQ++
Sbjct: 282 DKFKAKNNKITLLKEYDKQKLIEIINKSLTARQLS 316
>UniRef50_Q8QLL0 Cluster: BRO-b; n=2; Nucleopolyhedrovirus|Rep:
BRO-b - Mamestra configurata NPV-A
Length = 372
Score = 189 bits (461), Expect = 5e-47
Identities = 111/239 (46%), Positives = 154/239 (64%), Gaps = 27/239 (11%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY-----APA--------VEMDTNDV----- 616
LI SK+P A E + W+ +++ ++ TG+Y APA + TND
Sbjct: 128 LIQASKMPKAQEFRNWINSDLLVKLCDTGEYHMQTDAPADITEGMNVIHSVTNDGKEAPW 187
Query: 615 IAKIDDLTQKLTVANADLA---EANRSLILFANE----MIVARRDVETARQDCEXARRET 457
I + +L Q + + + +A E N+ L + E + VA + + A AR++T
Sbjct: 188 IKDLSELKQIVALKDQIIAMKDEENKKLTVNLQEANQNLTVANQGLLQAFNIVNEARKDT 247
Query: 456 AQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGF--ND 283
A+LANRMADIAQDVIAKP+NPQL HSLAVC +G +++AF+RPQKRSL RSL RL D
Sbjct: 248 AELANRMADIAQDVIAKPANPQLLHSLAVCSMGGDQYAFVRPQKRSLKRSLDRLAVEERD 307
Query: 282 VIFSSDYXPNSMNVXNKVKEAIPRNKFKAKHNRITLLEDYTREELMNVIGSTMTDRQIA 106
+++ SDY PN +NV NKVKEA+P++KF A+HN+ITLL D T+EEL++VI STMT RQ+A
Sbjct: 308 IVYKSDYVPNGVNVLNKVKEALPKDKFTARHNKITLLNDMTKEELVDVISSTMTTRQLA 366
>UniRef50_Q99GY7 Cluster: Bro; n=27; root|Rep: Bro - Helicoverpa
armigera nucleopolyhedrovirus G4
Length = 527
Score = 183 bits (445), Expect = 5e-45
Identities = 112/239 (46%), Positives = 156/239 (65%), Gaps = 27/239 (11%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY-----AP--------AVEMDTND--VIAK 607
LI S++P A E ++W+ +++P++ GKY AP AV TN+
Sbjct: 269 LIQASRMPKAQEFRDWINSDLLPKLCDDGKYDMAADAPKEIANGMNAVHAITNEGKEAPW 328
Query: 606 IDDLTQ-KLTVANAD--LA---EANRSLILF---ANE-MIVARRDVETARQDCEXARRET 457
++D + KL +++ D LA + N +L + AN + VA + + A AR+ET
Sbjct: 329 MEDFREFKLMLSHKDELLAVKDKENEALTVALQNANHNLAVANQGLLKAFDVVNDARKET 388
Query: 456 AQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGFN--D 283
A++A RMADIAQDVIAKPS+PQL HSLAVC +G +++AFLRPQKRSL RSL RL + D
Sbjct: 389 AEIAKRMADIAQDVIAKPSDPQLLHSLAVCSMGGDQYAFLRPQKRSLKRSLDRLSVDEKD 448
Query: 282 VIFSSDYXPNSMNVXNKVKEAIPRNKFKAKHNRITLLEDYTREELMNVIGSTMTDRQIA 106
+++ SDY PNSMNV NKVKE +P+ K+KA+HNRITL ED TRE+L+ I ST++ RQ+A
Sbjct: 449 IVYKSDYVPNSMNVLNKVKERLPKEKYKARHNRITLHEDLTREDLLQAIESTVSSRQVA 507
>UniRef50_Q4KT25 Cluster: BRO-A; n=3; root|Rep: BRO-A - Chrysodeixis
chalcites nucleopolyhedrovirus
Length = 517
Score = 175 bits (427), Expect = 7e-43
Identities = 88/167 (52%), Positives = 121/167 (72%), Gaps = 2/167 (1%)
Frame = -1
Query: 600 DLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQLANRMADIAQ 421
+L+ L +N L +AN L+ FA+ ++ + + A + E LANRMADIAQ
Sbjct: 348 ELSVSLRTSNEKLQDANDKLMYFASALVDSNNGLMKANERIE-------NLANRMADIAQ 400
Query: 420 DVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGFND--VIFSSDYXPNSM 247
DVIAKPS+PQL HSLAVC +G ++AF+RPQKRSL RSL RL ++ ++F S+Y PN+M
Sbjct: 401 DVIAKPSDPQLLHSLAVCALGEGQYAFVRPQKRSLKRSLDRLSIDESQILFKSNYVPNAM 460
Query: 246 NVXNKVKEAIPRNKFKAKHNRITLLEDYTREELMNVIGSTMTDRQIA 106
NV NKVKE++P++KF A+HN+ITLLED TRE+L+ I S+MT+RQ+A
Sbjct: 461 NVLNKVKESLPKDKFTARHNKITLLEDLTREDLVEAINSSMTERQVA 507
>UniRef50_O55569 Cluster: P20; n=5; Nucleopolyhedrovirus|Rep: P20 -
Leucania separata nuclear polyhedrosis virus (LsNPV)
Length = 179
Score = 118 bits (285), Expect = 1e-25
Identities = 58/142 (40%), Positives = 91/142 (64%), Gaps = 7/142 (4%)
Frame = -1
Query: 525 EMIVARRDVETAR--QDCEXARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNN 352
++I+ +D + A A + L+ R+ DI QDV+ KP N QL H+LAVC++ N
Sbjct: 36 DVIIQHKDAQIAELLNAILLANSQCMSLSKRLVDIVQDVVVKPQNCQLLHALAVCELSCN 95
Query: 351 EFAFLRPQKRSLGRSLKRLGFND-----VIFSSDYXPNSMNVXNKVKEAIPRNKFKAKHN 187
+FAFLR Q RSL RS+KRL + +I+ S+Y PNS+N+ NK+KE +P++KF A+HN
Sbjct: 96 KFAFLRTQLRSLKRSIKRLQRAEQHEPTIIYQSEYVPNSINILNKIKEQLPKDKFTARHN 155
Query: 186 RITLLEDYTREELMNVIGSTMT 121
+I L++D ++ L+ ++ T
Sbjct: 156 KIQLVDDCGKDTLVKLLSELKT 177
>UniRef50_Q287E9 Cluster: BRO-D; n=3; unclassified
Nucleopolyhedrovirus|Rep: BRO-D - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 336
Score = 89.8 bits (213), Expect = 6e-17
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADL 562
LIMKSKLPYA+ELQEWLLEEVIPQVLCTGKY PAV+ ++ + +++Q L+ D
Sbjct: 108 LIMKSKLPYAVELQEWLLEEVIPQVLCTGKYQPAVDNGNGATVSMLHEISQSLSTIQRDN 167
Query: 561 AEANRSLI----------LFANEMIVARRDVETA-RQDCEXARRETAQLANRMADIAQDV 415
+ ++ N ++ + T +Q + + + L +M D++
Sbjct: 168 EQLKTVIVKKDQQIEQTTRMINRVMADMNRMYTGFQQTMQKKDEQVSSLVEKMVDLSDRA 227
Query: 414 IAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGFNDVIFSSDYXPNSMNVXN 235
+ PSN + L V G A ++ + KR I PN +
Sbjct: 228 VEYPSNEKKLPILCVMQDGTKFHAITGQKQYVQAQKNKRNIDERTIILEKKRPNPTMDWS 287
Query: 234 KVKEAIPRNKFKAKHNR 184
K E + R + K +R
Sbjct: 288 KAVETVARTRGVKKSHR 304
>UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Rep:
BRO - Spodoptera frugiperda nuclear polyhedrosis virus
(SfNPV)
Length = 334
Score = 84.6 bits (200), Expect = 2e-15
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 17/219 (7%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAK--------IDDLTQK 586
LIMKSKL YA+ELQEW+ EEVIPQVLCTGKY+P + I K D+ Q
Sbjct: 106 LIMKSKLSYAVELQEWMFEEVIPQVLCTGKYSPQAALTEEKEIVKHFQVQMKNKDEQVQN 165
Query: 585 LTVANADLAEANRSLI--LF--ANEMIVARRDVETARQDCEXAR-RETAQLANRMADIAQ 421
L V + + E ++I L N M +D + + + ++ +L +++ D+++
Sbjct: 166 LIVQLSKVTEHKNAMIEKLLNNVNNMYTKLQDTVSKTNEIMLQKDKQINKLLDKLDDVSE 225
Query: 420 DVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGFNDVIFSSDYXPNSM-- 247
V+ P++ + + N+ + QK + LKR +N I PN M
Sbjct: 226 RVVQYPADDTKMPMICIAKNNNDFEVIVGQQKYVRAQKLKRKFYNYEIIVESKRPNPMLD 285
Query: 246 --NVXNKVKEAIPRNKFKAKHNRITLLEDYTREELMNVI 136
NV +K K K ++ + E I
Sbjct: 286 WTNVTQSLKNEFSEESLKKKSRSLSFTDSEDAERFKTAI 324
>UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing
protein ORF2; n=12; Nucleopolyhedrovirus|Rep:
Uncharacterized Bro-N domain-containing protein ORF2 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 328
Score = 82.6 bits (195), Expect = 9e-15
Identities = 53/118 (44%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAV---EMDTNDVIAK-IDDLTQKLTVA 574
LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY PA+ E ++ ++ K I T+
Sbjct: 98 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQREEESKQLVTKLIATFTEHTNAL 157
Query: 573 NADLAEANRSLILFAN--EMIVARRDVETARQDCEXARRETAQLANRMADIAQDVIAK 406
A +A+ L+ E IVA +D + +D + R T NRM Q+ + K
Sbjct: 158 QAVVAQKTEELVKKQEFIERIVAIKDKQIEAKDLQVTRVMTD--LNRMYTGFQETMQK 213
>UniRef50_Q9YML3 Cluster: Uncharacterized Bro-N domain-containing
protein J; n=1; Lymantria dispar MNPV|Rep:
Uncharacterized Bro-N domain-containing protein J -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 403
Score = 72.9 bits (171), Expect = 7e-12
Identities = 34/54 (62%), Positives = 39/54 (72%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLT 580
LIMKSKLPYA+ELQ WLLEEVIPQVLCTGKY PA++ + D L + T
Sbjct: 98 LIMKSKLPYAVELQAWLLEEVIPQVLCTGKYDPAIKHQQEETKRMTDRLIKVFT 151
>UniRef50_A4KX99 Cluster: Bro6; n=1; Heliothis virescens ascovirus
3e|Rep: Bro6 - Heliothis virescens ascovirus 3e
Length = 153
Score = 64.9 bits (151), Expect = 2e-09
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Frame = -1
Query: 615 IAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQLANRM 436
IA+ID L + + + +AE N L +I + + + D ARR+T +LANR+
Sbjct: 30 IAEIDSLKRMVCEKDKKIAELNDKLTSMTGHLIQSNASLVSVSNDLVSARRDTVKLANRI 89
Query: 435 ADIAQDVIAKPSNPQLCHSLAVCD-VGNNEFAFLRPQKRSL 316
ADI Q V+AKPS + HSL + + + + A R QKRS+
Sbjct: 90 ADITQAVVAKPSVEECLHSLVMHSMISSRDTATNRSQKRSI 130
>UniRef50_Q0IL61 Cluster: Bro-e; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: Bro-e - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 354
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/69 (50%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA--PAVEMDTNDVIAKIDDLTQKLTVANA 568
LIM SKLPYA+ELQEWLLEEVIPQVL TG+Y A ND ++ L Q+++
Sbjct: 120 LIMHSKLPYAVELQEWLLEEVIPQVLSTGRYVCETAPSKSVNDCQSQTVVLLQEISQTMG 179
Query: 567 DLAEANRSL 541
L N L
Sbjct: 180 QLKRDNEDL 188
>UniRef50_Q6VZI7 Cluster: CNPV160 N1R/p28-like protein; n=11;
Avipoxvirus|Rep: CNPV160 N1R/p28-like protein -
Canarypox virus (CNPV)
Length = 396
Score = 54.0 bits (124), Expect = 4e-06
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Frame = -1
Query: 465 RETAQLANRMADIAQ---DVIAKPSNPQLCHSLAVCDVGN--NEFAFLRPQKRSLGRSLK 301
R+T +L + I + D + PS+P H L + N N F LR Q + L R L
Sbjct: 269 RDTLELKTELKKIEERLKDKVINPSSPDKLHRLVILQKKNDSNSFRTLRVQAKGLDRELD 328
Query: 300 RLGFNDVIFSSDYXPNSMNVXNKVKE-AIPRNKFKAKHNRITL--LEDYTREELMN 142
++ + +F + Y PN+++ N++KE + + + K +N TL LE+Y EL N
Sbjct: 329 KVKRDYRVFFNAYEPNAVSCFNRLKERLLEQERVKINYNDFTLCDLENYGVRELYN 384
>UniRef50_Q9PYR4 Cluster: ORF131; n=1; Xestia c-nigrum
granulovirus|Rep: ORF131 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 442
Score = 50.8 bits (116), Expect = 3e-05
Identities = 32/94 (34%), Positives = 48/94 (51%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADL 562
LI+KSKLP A + Q+WL EEV+P++ TGKY + T+ I D + + N L
Sbjct: 78 LIIKSKLPAAEKFQKWLFEEVLPELRRTGKYDMSEAASTSTEIVNYDKKLAEAQIENLQL 137
Query: 561 AEANRSLILFANEMIVARRDVETARQDCEXARRE 460
+ + S + +E +A + RQ E RE
Sbjct: 138 -KLDLSQTVAKSENKIAELERNYERQIAEYKDRE 170
>UniRef50_Q6VZC0 Cluster: CNPV227 N1R/p28-like protein; n=3;
Canarypox virus|Rep: CNPV227 N1R/p28-like protein -
Canarypox virus (CNPV)
Length = 359
Score = 50.8 bits (116), Expect = 3e-05
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Frame = -1
Query: 636 EMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRET 457
++DT ++ + +K +L E N+ L +N + +R E +D + E
Sbjct: 188 DLDTRELKEHNKRMEEKYDRDTRELKEHNKEL---SNSV---KRMEEKYDRDTHELKTEL 241
Query: 456 AQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGN--NEFAFLRPQKRSLGRSLKRLGFND 283
++ R+ +D + PS+P H L + N F LR Q L R L ++ +
Sbjct: 242 KKIEERL----KDKVINPSSPNKLHRLVILQNKRDPNSFKTLRLQAERLDRELDKVKRDY 297
Query: 282 VIFSSDYXPNSMNVXNKVKE-AIPRNKFKAKHNRITL--LEDYTREELMN 142
+F + Y PN+++ N++KE + + + K +N TL LE+Y EL N
Sbjct: 298 KVFFNAYEPNAVSCFNRLKERLLEQERVKINYNDFTLCDLENYGVRELCN 347
>UniRef50_Q6VZH8 Cluster: CNPV169 N1R/p28-like protein; n=2;
Canarypox virus|Rep: CNPV169 N1R/p28-like protein -
Canarypox virus (CNPV)
Length = 332
Score = 50.4 bits (115), Expect = 5e-05
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Frame = -1
Query: 507 RDVETARQDCEXARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGN--NEFAFLR 334
RD + + + E +L R+ +D + P++P H L + N F LR
Sbjct: 198 RDTNELKSELREVKTELKKLEERL----KDKVINPTSPNKLHRLVILQNKRDPNSFKTLR 253
Query: 333 PQKRSLGRSLKRLGFNDVIFSSDYXPNSMNVXNKVKE-AIPRNKFKAKHNRITL--LEDY 163
Q L R L ++ + +F + Y PN+++ N++KE + + + K +N TL LE+Y
Sbjct: 254 LQAERLDRELDKVKRDYRVFFNAYEPNAVSCFNRLKERLLEQERVKINYNDFTLCDLENY 313
Query: 162 TREELMNVIGSTMTDRQIA 106
EL N + + R+ A
Sbjct: 314 GVRELYNDLNNLDLVRKYA 332
>UniRef50_O10320 Cluster: Putative uncharacterized protein; n=1;
Orgyia pseudotsugata MNPV|Rep: Putative uncharacterized
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 60
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2
Query: 296 NRFKLRPSDRFCGRRNANSLLPTSHTARLWHSCG 397
N FKLR S+RFCGR NANSLLP++HTA + G
Sbjct: 8 NLFKLRRSERFCGRTNANSLLPSAHTASACSTAG 41
>UniRef50_Q9E231 Cluster: Orf60-like protien; n=14;
Baculoviridae|Rep: Orf60-like protien - Helicoverpa zea
SNPV
Length = 501
Score = 47.2 bits (107), Expect = 4e-04
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA-----PAVEMDTNDVIA---KIDDLTQK 586
LIM+SKLP A E Q WL EEV+P++ TGKY+ + ++ +V++ K+ ++ +
Sbjct: 95 LIMRSKLPAAEEFQSWLFEEVLPELRRTGKYSIENRRQSSTDNSTEVVSYDQKLANVQME 154
Query: 585 LTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQLANRMADIA 424
L+EAN + + M +R+ E +Q E RE ++ +M D+A
Sbjct: 155 ALQLKLQLSEANIKIAEWNTNMSEMKRNYE--QQMSEYKERE-FKMQLQMKDMA 205
>UniRef50_Q919G9 Cluster: CUN108 putative bro protein, ATP_GTP_A
motif, similar to AcMNPV ORF2; n=1; Culex nigripalpus
NPV|Rep: CUN108 putative bro protein, ATP_GTP_A motif,
similar to AcMNPV ORF2 - Culex nigripalpus NPV
Length = 601
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDV--IAKIDDLTQKLTVANA 568
LI++S+LP A ++W+ V+P + TG+Y +E++ ++I+ L KL +A +
Sbjct: 251 LILESRLPNAKRYKQWVCGTVLPSIRKTGRYERTMELEPKSCGDNSRIELLETKLALAES 310
Query: 567 D----LAEANRSLILFANEMIVARRDVETARQDCEXARR 463
LAE+ +L E + RR +E R E R+
Sbjct: 311 RSSLILAESRNALFKIEAERELERRSMEAERDKIEVERK 349
>UniRef50_A5I4G4 Cluster: BRO family protein; n=1; Clostridium
botulinum A str. ATCC 3502|Rep: BRO family protein -
Clostridium botulinum A str. ATCC 3502
Length = 266
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/102 (23%), Positives = 49/102 (48%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADL 562
LI S+LP A + + W+ +E++P + TG Y + ++ N + +D+ ++ + ++
Sbjct: 79 LITHSELPSAEKFEIWIFDEILPTIRKTGGYVASEDLFINTYLPYLDEQSKMVFRNTLEI 138
Query: 561 AEANRSLILFANEMIVARRDVETARQDCEXARRETAQLANRM 436
+I + I + DV D E + E Q+ NR+
Sbjct: 139 VRKQNEIIALKEKEIEHKEDVIVGLVD-EISLAEKRQILNRV 179
>UniRef50_A5IZQ5 Cluster: Bro-2; n=1; Spodoptera litura
granulovirus|Rep: Bro-2 - Spodoptera litura granulovirus
Length = 368
Score = 42.7 bits (96), Expect = 0.009
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = -1
Query: 735 MKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADLAE 556
M+SKLP A E Q WL EEV+P++ +GKY N +D + A +
Sbjct: 1 MRSKLPAAEEFQRWLFEEVLPELRKSGKYDMTKRQSVNWAKKYVDVVKSDHKNQLATIRA 60
Query: 555 ANRSLILFANEMIVARRDVETA--RQDCEXARRE 460
+R+ +L A E+ + RDVE RQ E +RE
Sbjct: 61 EHRTELL-AYELKL--RDVEKCYERQIMEYKQRE 91
>UniRef50_A4XBY6 Cluster: BRO domain protein domain protein; n=2;
Salinispora|Rep: BRO domain protein domain protein -
Salinispora tropica CNB-440
Length = 284
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY--APAVEMDTNDVIAKIDDLTQKLTVANA 568
LI +S+ P A + W+ EV+P + TG+Y PAV D + D ++L A
Sbjct: 98 LIFQSRKPEARAFRRWVTHEVLPAIRATGRYESVPAVPQSYADALQLAADQARQLDAQAA 157
Query: 567 DLAEA 553
+LAEA
Sbjct: 158 ELAEA 162
>UniRef50_A5MYH6 Cluster: Predicted prophage antirepressor; n=1;
Clostridium kluyveri DSM 555|Rep: Predicted prophage
antirepressor - Clostridium kluyveri DSM 555
Length = 267
Score = 41.9 bits (94), Expect = 0.016
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDT-NDVIAKIDDLTQKLTV--AN 571
L+ S+LP A E + W+ ++V+PQ+ TG Y P E ++ D++AK L K T+ N
Sbjct: 79 LVANSELPGAQEFESWIFDKVLPQINHTGGYIPNNEDESEEDILAKA-VLIAKRTIERKN 137
Query: 570 ADLAEANRSL 541
+A+ N+ L
Sbjct: 138 EIIADKNKQL 147
>UniRef50_A4KXK3 Cluster: Bro17; n=2; Heliothis virescens ascovirus
3e|Rep: Bro17 - Heliothis virescens ascovirus 3e
Length = 502
Score = 40.3 bits (90), Expect = 0.049
Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 11/235 (4%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADL 562
L KS LP A E Q+W+ EEV+P + TG Y + +A+ D +KL +L
Sbjct: 97 LCTKSTLPEAEEFQDWIYEEVLPTIRRTGGY--NIHDRNGTSVAEYD---KKLADGQNEL 151
Query: 561 AEANRSLILFAN-EMIVARRDVETARQDCEXAR---RETAQLANRMADIAQDVIAKPSNP 394
+ S+ AN E VA+ D A E + + A++A + + + A S
Sbjct: 152 TKTQLSV---ANLETQVAKYDARIAELQLENEKVVSKYDARIAGLQLENEKTISALKSE- 207
Query: 393 QLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLG--FNDVIFSSDYXPNSMNVXNKVKEA 220
H + + +EF + +G + F + + ++D + + +K+
Sbjct: 208 ---HQKEIAALKEHEFKLHLALRDMMGNANNATAQFFANALLANDNIAENDELRSKITNM 264
Query: 219 IPRNKFKAKHNR-----ITLLEDYTREELMNVIGSTMTDRQIARMNSLRNAQ*KF 70
R A HNR + + +Y L VI T + R+ M++L N + ++
Sbjct: 265 RDRVS-PALHNRPDKREVVSVHEYENSALQTVIRCTRSQRK--EMDNLDNIRKRY 316
>UniRef50_Q0I4I5 Cluster: Putative uncharacterized protein; n=2;
Histophilus somni|Rep: Putative uncharacterized protein
- Haemophilus somnus (strain 129Pt) (Histophilus somni
(strain 129Pt))
Length = 204
Score = 40.3 bits (90), Expect = 0.049
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 649
+I KS+ A+E Q W+ EEV+PQ+ TGKY
Sbjct: 77 IIFKSRKAEAVEFQNWVFEEVLPQIRKTGKY 107
>UniRef50_A3HNE6 Cluster: BRO domain protein domain protein; n=1;
Pseudomonas putida GB-1|Rep: BRO domain protein domain
protein - Pseudomonas putida (strain GB-1)
Length = 285
Score = 40.3 bits (90), Expect = 0.049
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY-APAVEMD 628
L+M+SK+P A +EW++ EV+P + TG Y APA D
Sbjct: 98 LVMRSKMPQAERFEEWVVSEVLPSIRKTGGYTAPAQPAD 136
>UniRef50_Q5UP83 Cluster: Putative KilA-N domain-containing protein
L4; n=1; Acanthamoeba polyphaga mimivirus|Rep: Putative
KilA-N domain-containing protein L4 - Mimivirus
Length = 454
Score = 40.3 bits (90), Expect = 0.049
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 336 RPQKRSLGRSLKRLGFNDVIFSSDYXPNSMNVXNKVKEAIPRNKFK--AKHNRITLLEDY 163
+ + +L R K +VI + Y PNSM++ N+ K+ + + K K K ++ L EDY
Sbjct: 374 KSKSSALSRYYKSHPKGNVILTIKYTPNSMHLWNECKDDLHKKKIKLSKKSSKFNLREDY 433
Query: 162 TREELMNVI 136
T ++L+ I
Sbjct: 434 TEKQLIKDI 442
>UniRef50_Q96258 Cluster: AR791; n=2; Arabidopsis thaliana|Rep:
AR791 - Arabidopsis thaliana (Mouse-ear cress)
Length = 573
Score = 39.5 bits (88), Expect = 0.085
Identities = 26/96 (27%), Positives = 44/96 (45%)
Frame = -1
Query: 705 LQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFAN 526
LQE ++ V+P L K + D I ++ D +L N +L+E S+ + AN
Sbjct: 255 LQEEEIKPVLPD-LEADKMMQRLR-DLESEINELTDTNTRLQFENFELSEKLESVQIIAN 312
Query: 525 EMIVARRDVETARQDCEXARRETAQLANRMADIAQD 418
+ ++ET R+DC R E +L + + D
Sbjct: 313 SKLEEPEEIETLREDCNRLRSENEELKKDVEQLQGD 348
>UniRef50_Q3Y2L0 Cluster: BRO, N-terminal; n=1; Enterococcus faecium
DO|Rep: BRO, N-terminal - Enterococcus faecium DO
Length = 248
Score = 39.1 bits (87), Expect = 0.11
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADL 562
LI+KS LP A + + W++EEV+P + TG Y+ V + DL +K + +
Sbjct: 76 LIIKSNLPSAEKFEAWVMEEVLPTIRKTGSYS-NVPQSFAQALRLAADLEEKNQLLEQQI 134
Query: 561 AE 556
AE
Sbjct: 135 AE 136
>UniRef50_A4P0J2 Cluster: Possible prophage antirepressor; n=1;
Haemophilus influenzae 22.4-21|Rep: Possible prophage
antirepressor - Haemophilus influenzae 22.4-21
Length = 210
Score = 39.1 bits (87), Expect = 0.11
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 649
+I +S AIE Q W+ EEV+PQ+ TGKY
Sbjct: 77 IIFRSNKAEAIEFQNWIFEEVLPQIRKTGKY 107
>UniRef50_Q919R4 Cluster: CUN001 putative bro protein, ATP_GTP_A
motif, similar to AcMNPV ORF 2; n=1; Culex nigripalpus
NPV|Rep: CUN001 putative bro protein, ATP_GTP_A motif,
similar to AcMNPV ORF 2 - Culex nigripalpus NPV
Length = 593
Score = 38.7 bits (86), Expect = 0.15
Identities = 28/94 (29%), Positives = 47/94 (50%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADL 562
LI++S+LP A ++W+ V+P + TG+Y D DV + DDL L AD
Sbjct: 254 LILESRLPNAKRYKQWVCGTVLPSIRRTGRY------DVRDV-KREDDLA--LAQLKADF 304
Query: 561 AEANRSLILFANEMIVARRDVETARQDCEXARRE 460
AE + ++ + +RD+ A + CE + +
Sbjct: 305 AEQKLNNCELQRDLAITQRDL--AVEKCEKLKSQ 336
>UniRef50_Q629R8 Cluster: Polysaccharide deacetylase family protein;
n=20; Burkholderiaceae|Rep: Polysaccharide deacetylase
family protein - Burkholderia mallei (Pseudomonas
mallei)
Length = 395
Score = 38.3 bits (85), Expect = 0.20
Identities = 23/62 (37%), Positives = 27/62 (43%)
Frame = +2
Query: 329 CGRRNANSLLPTSHTARLWHSCGLLGLAITSCAMSAMRLASCAVSRRAXSQSCRAVSTSR 508
CG + TS T +CG G T C AMR+ A R A + C A TSR
Sbjct: 15 CGTCGTSGTCGTSGTCGTCGTCGTCGTCGT-CGTCAMRVTGAAARRPATAMRCAAKRTSR 73
Query: 509 RA 514
RA
Sbjct: 74 RA 75
>UniRef50_Q30XK5 Cluster: Prophage antirepressor-like; n=2;
Desulfovibrio desulfuricans G20|Rep: Prophage
antirepressor-like - Desulfovibrio desulfuricans (strain
G20)
Length = 197
Score = 38.3 bits (85), Expect = 0.20
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANAD 565
LI +S+ P AI Q+W+ +EV+P + G Y DT++ I I TQ + +A D
Sbjct: 92 LIFQSRKPEAIAFQDWVCKEVLPSIRKHGAYFMMKPTDTDESI--IQKATQIIALARED 148
>UniRef50_P44189 Cluster: Uncharacterized protein HI1418; n=8;
Pasteurellaceae|Rep: Uncharacterized protein HI1418 -
Haemophilus influenzae
Length = 201
Score = 38.3 bits (85), Expect = 0.20
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 649
LI+KS+ P A + W+ EEV+PQ+ TGKY
Sbjct: 94 LIIKSRKPEAEPFEAWVFEEVLPQIRKTGKY 124
>UniRef50_Q7N339 Cluster: Similar to bacteriophage protein; n=2;
Enterobacteriaceae|Rep: Similar to bacteriophage protein
- Photorhabdus luminescens subsp. laumondii
Length = 314
Score = 37.5 bits (83), Expect = 0.34
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 646
L+M+S LP A Q+W+ E V+P ++ TG Y+
Sbjct: 149 LVMRSNLPSAERFQDWVCEAVLPSIMETGSYS 180
>UniRef50_Q1J4V4 Cluster: Phage antirepressor protein; n=1;
Streptococcus pyogenes MGAS10750|Rep: Phage
antirepressor protein - Streptococcus pyogenes serotype
M4 (strain MGAS10750)
Length = 244
Score = 37.5 bits (83), Expect = 0.34
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADL 562
LI+ SKLP A + W+ EV+P + G Y E TN+ + L + VAN +
Sbjct: 79 LILSSKLPQAKIFKAWVTREVLPSIRKNGGYIVGQEKKTNEEL-----LADAILVANRII 133
Query: 561 AEANRSL 541
AE +
Sbjct: 134 AEREEEI 140
>UniRef50_A6LVQ3 Cluster: Prophage antirepressor; n=3; root|Rep:
Prophage antirepressor - Clostridium beijerinckii NCIMB
8052
Length = 251
Score = 37.5 bits (83), Expect = 0.34
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVI 613
L+ KS+LP A + + W+ +EV+P + TG YA +D D++
Sbjct: 86 LVAKSELPGAEKFEAWIFDEVLPCIRKTGMYATDELLDNPDLL 128
>UniRef50_A1AN22 Cluster: BRO domain protein domain protein; n=1;
Pelobacter propionicus DSM 2379|Rep: BRO domain protein
domain protein - Pelobacter propionicus (strain DSM
2379)
Length = 247
Score = 37.5 bits (83), Expect = 0.34
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 649
LIM+SKLP A +EW++ EV+P + TG Y
Sbjct: 77 LIMRSKLPAAERFEEWVVAEVLPAIRKTGFY 107
>UniRef50_A0RLT8 Cluster: Antirepressor, phage associated; n=3;
Bacillus cereus group|Rep: Antirepressor, phage
associated - Bacillus thuringiensis (strain Al Hakam)
Length = 262
Score = 37.5 bits (83), Expect = 0.34
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD---TN-----DVIAKIDDLTQK 586
LI+KSKLP A + + W+ EEV+P + G Y ++ TN ++ K+ + +K
Sbjct: 84 LIVKSKLPQAEQFETWVFEEVLPSIRKHGAYMTDQVLEQAVTNPDFAIGLLTKLKEEKEK 143
Query: 585 LTVANADLAEANRSLILFANEMIVARRDVETA 490
L A + + + L+ FA + + + ++ +
Sbjct: 144 LAAAQQQIVQ-QQPLVTFAEACMQSDKSLKVS 174
>UniRef50_Q3SVF1 Cluster: Putative uncharacterized protein; n=2;
Nitrobacter|Rep: Putative uncharacterized protein -
Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)
Length = 496
Score = 37.1 bits (82), Expect = 0.45
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = -1
Query: 657 GKYAPAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMI--VARRDVETARQ 484
G AP + +T +A D L +A LA+ + + + +A+RD ETAR+
Sbjct: 242 GAAAPRNDGETPSDVASSDLAPSDLAAISARLAQTEQQIEQMTQSLTAEIAKRDAETARR 301
Query: 483 DCEXARRETAQLANRMADIAQD 418
D E AR ++ A A D
Sbjct: 302 DTESARNSEETAKSKQAAPADD 323
>UniRef50_A7LYR8 Cluster: Putative uncharacterized protein; n=2;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 269
Score = 37.1 bits (82), Expect = 0.45
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 649
LIM+SKLP A Q+W+ EE++P + G Y
Sbjct: 86 LIMRSKLPQAEAFQDWVCEEILPSIRKHGAY 116
>UniRef50_A6PK75 Cluster: BRO domain protein; n=1; Victivallis
vadensis ATCC BAA-548|Rep: BRO domain protein -
Victivallis vadensis ATCC BAA-548
Length = 357
Score = 37.1 bits (82), Expect = 0.45
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY-APAV 637
LI SKLP A + + W+ EEV+P + TG Y AP+V
Sbjct: 79 LICGSKLPAAQKFERWVFEEVLPAIRRTGSYAAPSV 114
>UniRef50_UPI0000397D5D Cluster: COG3617: Prophage antirepressor;
n=1; Actinobacillus pleuropneumoniae serovar 1 str.
4074|Rep: COG3617: Prophage antirepressor -
Actinobacillus pleuropneumoniae serovar 1 str. 4074
Length = 215
Score = 36.7 bits (81), Expect = 0.60
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 646
+I +S AI+ Q W+ EEV+PQ+ TG+Y+
Sbjct: 23 IIFRSNKSQAIDFQNWVFEEVLPQIRKTGQYS 54
>UniRef50_A0A7D8 Cluster: Prophage antirepressor; n=1; Cyanophage
Ma-LMM01|Rep: Prophage antirepressor - Cyanophage
Ma-LMM01
Length = 270
Score = 36.7 bits (81), Expect = 0.60
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPA---VEMDTNDVIAKIDDLTQKLTVAN 571
L++ S+ P A Q+W+++EV+P + TG+Y+ + + + + + L +L N
Sbjct: 83 LVLSSRKPQAELFQDWVVQEVLPTIRKTGRYSVSDFKIPTTYGEALLEAGRLALELEQTN 142
Query: 570 ADLAEANRSL 541
L + N +L
Sbjct: 143 VTLEQVNATL 152
>UniRef50_Q9TM34 Cluster: DNA-directed RNA polymerase subunit
beta''; n=1; Cyanidium caldarium|Rep: DNA-directed RNA
polymerase subunit beta'' - Cyanidium caldarium
Length = 1269
Score = 36.7 bits (81), Expect = 0.60
Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Frame = -1
Query: 537 LFANEMIVARRDVETARQDCEXARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVG 358
L E +++ D ++ L R+ D+AQD+I + + + + + ++
Sbjct: 179 LNVTEYLISSYGARKGLVDTSLRTADSGYLTRRLVDVAQDIIVREIDCKTNNGITFSNIQ 238
Query: 357 NNEFAFLRPQKRSLGRSLKRLGFNDVIFSSDY-XPNSMNVXNKVKEAIPRNKFKAKHNRI 181
NNE + KR +GR L N + + N++ N +KE N K K
Sbjct: 239 NNEKIIIPLYKRLIGRILADDVKNPITPQVNIASKNTLITGNLIKEFKKNNIQKIKLRSP 298
Query: 180 TLLEDYTREELMNVIGSTMTDRQI 109
+ Y R G++++D ++
Sbjct: 299 LTCQSY-RSICQKCYGASLSDGKL 321
>UniRef50_Q5F6A8 Cluster: Putative uncharacterized protein; n=2;
Neisseria gonorrhoeae FA 1090|Rep: Putative
uncharacterized protein - Neisseria gonorrhoeae (strain
ATCC 700825 / FA 1090)
Length = 332
Score = 36.3 bits (80), Expect = 0.79
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 649
+I +S+ A++ Q+W+ EEVIPQ+ TG Y
Sbjct: 127 VIFRSRKAEAVKFQDWIFEEVIPQIRKTGGY 157
>UniRef50_Q2L2E4 Cluster: Phage protein; n=1; Bordetella avium
197N|Rep: Phage protein - Bordetella avium (strain 197N)
Length = 374
Score = 36.3 bits (80), Expect = 0.79
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAP-AVEMDTNDVIAK 607
L+++S+ P A + +W+ EV+PQ+ TG Y P ++ D++ K
Sbjct: 145 LVLRSRKPEARKFAKWVTSEVLPQIRKTGAYLPKEFAVNPGDILTK 190
>UniRef50_A7IY79 Cluster: Putative antirepressor; n=1;
Corynebacterium phage P1201|Rep: Putative antirepressor
- Corynebacterium phage P1201
Length = 307
Score = 36.3 bits (80), Expect = 0.79
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKID---DLTQKLTVAN 571
+I+ S+ P A E + W+ EVIP + G Y + +++ +V+ D + Q L
Sbjct: 121 VILDSRKPEAKEFRRWITSEVIPSIRKHGAYLTSEKIE--EVLLNPDAIIQIAQSLKAEQ 178
Query: 570 ADLAEANRSLILFANEMIVARRDVETAR 487
EA + L L A VA+ +E R
Sbjct: 179 QARLEAEKKLKLEAEARKVAQEQIEADR 206
>UniRef50_A4TYQ8 Cluster: BRO, N-terminal; n=1; Magnetospirillum
gryphiswaldense|Rep: BRO, N-terminal - Magnetospirillum
gryphiswaldense
Length = 300
Score = 35.9 bits (79), Expect = 1.0
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTG 655
LI+ SKLP A+ + W+ EEV+P + TG
Sbjct: 77 LIVGSKLPAAVRFERWVFEEVLPTIRTTG 105
>UniRef50_A1SY75 Cluster: Diguanylate cyclase/phosphodiesterase;
n=1; Psychromonas ingrahamii 37|Rep: Diguanylate
cyclase/phosphodiesterase - Psychromonas ingrahamii
(strain 37)
Length = 591
Score = 35.9 bits (79), Expect = 1.0
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 7/171 (4%)
Frame = -1
Query: 609 KIDDLTQKLTVANADLAEANRSL------ILFANEMIVAR-RDVETARQDCEXARRETAQ 451
K+ +KLT+AN +LA N L + F NE R ++ A Q+ +E A+
Sbjct: 48 KLTIANKKLTIANKELAIVNEELAIANKELAFQNEEKDKRAAELAIANQELTFQNKEKAK 107
Query: 450 LANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGFNDVIFS 271
A +A IA +A S + + + V N + F +K L L L F D +
Sbjct: 108 RAVELA-IANKELAFQSKEKAKRAAELAIV-NQDLTFQSKEKAKLAEELNDLAFYDTLTG 165
Query: 270 SDYXPNSMNVXNKVKEAIPRNKFKAKHNRITLLEDYTREELMNVIGSTMTD 118
PN + +++ A+ N + + + ++ +++ + +G + D
Sbjct: 166 ---LPNRRLLIDRLHHALASNVRQGCESAVMFIDLDHFKDINDTLGHEVGD 213
Score = 34.3 bits (75), Expect = 3.2
Identities = 25/108 (23%), Positives = 45/108 (41%)
Frame = -1
Query: 591 QKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQLANRMADIAQDVI 412
+KLT+AN L AN+ L + E+ + ++ A ++ E + A +A Q++
Sbjct: 40 KKLTIANKKLTIANKKLTIANKELAIVNEELAIANKELAFQNEEKDKRAAELAIANQELT 99
Query: 411 AKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGFNDVIFSS 268
+ N + + N E AF +K L + D+ F S
Sbjct: 100 FQ--NKEKAKRAVELAIANKELAFQSKEKAKRAAELAIVN-QDLTFQS 144
>UniRef50_A6N1W8 Cluster: Putative uncharacterized protein; n=1;
Microbacterium phage Min1|Rep: Putative uncharacterized
protein - Microbacterium phage Min1
Length = 250
Score = 35.9 bits (79), Expect = 1.0
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA---PAVEMDTNDVIAKI 604
LI S+LP A + W EEV+P V+ TG Y PA+ D + ++
Sbjct: 74 LITGSRLPQAERFERWAFEEVLPTVIRTGSYTAPPPALPQSYADALREL 122
>UniRef50_UPI000023F41C Cluster: hypothetical protein FG09272.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG09272.1 - Gibberella zeae PH-1
Length = 485
Score = 35.5 bits (78), Expect = 1.4
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = -1
Query: 315 GRSLKRLGFNDVIFSSDYXPNSMNVXNKVKEAIPRNKFKAKH-NRITLLEDYTREELMNV 139
GR+L NDV F+ Y P+ + + N + + N + H +R L+ D + L+
Sbjct: 113 GRTLYASSSNDV-FAWSYDPSKVTIDNSTVQTLVTNMANSGHTSRTLLISDKDPDMLLVS 171
Query: 138 IGSTMTDRQIARMNSLRNAQ*KFLYVVNAFNALGEP 31
GS D + A +Q + + +A + GEP
Sbjct: 172 RGSAGNDDRGAEDQETGRSQIRAFNISSAIESYGEP 207
>UniRef50_A3IXM9 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 440
Score = 35.5 bits (78), Expect = 1.4
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 8/171 (4%)
Frame = -1
Query: 588 KLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQLANRMADIAQDVIA 409
K V DL N +I + I++R E A+ D R +L+++ A ++
Sbjct: 203 KNPVYRGDLKYKNNEIISNTHVAIISRE--EAAQIDRLLGRNR--KLSSKTASAKHSLVG 258
Query: 408 KPSNPQLCH-SLAVCDVGNN----EFAFLRPQKRSLGRSLKRLGFNDVIFSS-DYXPNSM 247
S Q CH S+ + V E+ ++RPQ L K + + DV+ + DY N
Sbjct: 259 LVSC-QKCHNSMIINHVTQKNKKKEYLYIRPQNCPLTPQCKAIPYQDVLKKTIDYICN-- 315
Query: 246 NVXNKVKEAIPRNKFKAKHNRITLLED--YTREELMNVIGSTMTDRQIARM 100
+ KVK P+ K+ T +E+ Y +L ++I S + D Q A +
Sbjct: 316 HFPKKVKSFDPQKIEDYKNKIQTQIEEKKYIINQLSSLIQSNILDDQTANL 366
>UniRef50_A3DG82 Cluster: BRO-like protein; n=1; Clostridium
thermocellum ATCC 27405|Rep: BRO-like protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 254
Score = 35.5 bits (78), Expect = 1.4
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA--PAVE--MDTNDVIAK----IDDLTQK 586
LI+KSKLP A + W+ +EV+P + G YA +E ++ D + K + + +K
Sbjct: 76 LIVKSKLPKAERFERWVFDEVLPSIRKHGIYATDKVIEEMLNNPDTMIKTLQALKEERKK 135
Query: 585 LTVANADLAEANRSLILFAN 526
+ + E ++ L LF N
Sbjct: 136 IQKLTEKIEEQDKKLELFRN 155
>UniRef50_Q7RZP2 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 154
Score = 35.5 bits (78), Expect = 1.4
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +2
Query: 401 LGLAITSCAMSAMRLASCAVSRRAXSQSCRAVSTSRRATIISLANKMSDRLASAKSALAT 580
L +ITS A+++ A+ +VS S+ ++STS + + S+ ++ D +AS S LAT
Sbjct: 31 LSSSITS-ALASQSSAAASVSSSVNSK-VNSISTSAESAVASVTSEAGDSIASLNSQLAT 88
Query: 581 VNFCVRSSIL-AITSFVS 631
R+SI A+ S S
Sbjct: 89 ATGSDRASITSALASLAS 106
>UniRef50_Q47GU8 Cluster: Secretion protein HlyD; n=1; Dechloromonas
aromatica RCB|Rep: Secretion protein HlyD -
Dechloromonas aromatica (strain RCB)
Length = 397
Score = 35.1 bits (77), Expect = 1.8
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = -1
Query: 648 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXA 469
AP +D D I DL + +N +R+ ILF E + ARRD+E+A D A
Sbjct: 123 APLAILDAPDFGQAIADLRKAEADSNQRRKALSRAEILFEGEAL-ARRDLESAEADAHAA 181
Query: 468 RRETAQLANRMADI 427
E + R++++
Sbjct: 182 NAEAERARLRLSNL 195
>UniRef50_A6NXW4 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 309
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 649
LI++SKLP A + + W+ +EVIP + TG Y
Sbjct: 133 LIIRSKLPAAEKFELWVFDEVIPTIRKTGGY 163
>UniRef50_Q5UP77 Cluster: Uncharacterized Bro-N domain-containing
protein L2; n=1; Acanthamoeba polyphaga mimivirus|Rep:
Uncharacterized Bro-N domain-containing protein L2 -
Mimivirus
Length = 246
Score = 35.1 bits (77), Expect = 1.8
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 646
LI SK P+A+++++WL +EVIP ++ G Y+
Sbjct: 186 LIHHSKKPFAMKIKKWLDDEVIPALIMDGVYS 217
>UniRef50_UPI00005A9715 Cluster: PREDICTED: similar to ankyrin
repeat domain 26; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ankyrin repeat domain 26 - Canis
familiaris
Length = 150
Score = 34.7 bits (76), Expect = 2.4
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = -1
Query: 606 IDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQLANRMADI 427
+DDLTQ A+ D + S++ N ++ +R +E R+DCE R+ Q+ ++ +
Sbjct: 50 LDDLTQSSEAASEDYSV---SVLTIQNAILKYKRSIELKRKDCEQLTRKILQVEYKVNGL 106
Query: 426 AQ 421
Q
Sbjct: 107 EQ 108
>UniRef50_Q84IK9 Cluster: Antirepressor protein; n=1; Clostridium
sordellii|Rep: Antirepressor protein - Clostridium
sordellii
Length = 187
Score = 34.7 bits (76), Expect = 2.4
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD-TNDVIAKIDDLTQKLTVANAD 565
LI+KSKL + + W+ EEV+P + G+Y +D D + LT++L+ +
Sbjct: 85 LILKSKLKKVRKFEMWVFEEVLPTIRKHGEYINEDIIDEVLDDPILLRKLTERLSDEKSK 144
Query: 564 LAEANRSLILFANEMI 517
EA R + L +I
Sbjct: 145 RYEAERKVNLLKGNII 160
>UniRef50_Q7Q8A9 Cluster: ENSANGP00000011098; n=2; Culicidae|Rep:
ENSANGP00000011098 - Anopheles gambiae str. PEST
Length = 1813
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = -1
Query: 609 KIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQLANRMAD 430
KI L K+T N + A S L ++ + +D E R+E +L NR++D
Sbjct: 961 KIKTLEDKITRVNTTMKTAESSKSLLEIQLKAEKEKHTGTERDLEKVRKEKTKLDNRISD 1020
Query: 429 IAQDVIAKPSNPQL 388
+ +++ N +L
Sbjct: 1021 LEKELQLSKKNAEL 1034
>UniRef50_Q4PBB0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1152
Score = 34.7 bits (76), Expect = 2.4
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = -1
Query: 711 IELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILF 532
+E Q+ LE V + + A + + +++ A+ D+L ++L +ADLAE N+ +
Sbjct: 527 LEEQKAQLEGVEAEADELDRQVQAFKQEADELRAEADELHKELEAKDADLAETNKEMQEM 586
Query: 531 ANEMIVARRDVETARQD 481
+N M ++E AR D
Sbjct: 587 SNRMFGLEEELE-ARAD 602
>UniRef50_A5DQ83 Cluster: Predicted protein; n=1; Pichia
guilliermondii|Rep: Predicted protein - Pichia
guilliermondii (Yeast) (Candida guilliermondii)
Length = 264
Score = 34.7 bits (76), Expect = 2.4
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 425 AMSAMRLASCAVSRRAXSQSCRAVSTSRRATIISLANKMS-DRLASAKSALATVNFCVRS 601
A SA AS A + A + S A S + A+ S+A+ S ASAKSA + + +
Sbjct: 80 AASAASAASAASASAASAASVSAASAASAASAASVASATSVASAASAKSAASVASAASVA 139
Query: 602 SILAITSFVSISTAGAYLPVHS 667
S+ A S S+++A + V S
Sbjct: 140 SVAAAASAASVASAASAASVAS 161
>UniRef50_UPI00006CE95F Cluster: Viral A-type inclusion protein
repeat containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Viral A-type inclusion protein repeat
containing protein - Tetrahymena thermophila SB210
Length = 1668
Score = 34.3 bits (75), Expect = 3.2
Identities = 23/131 (17%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Frame = -1
Query: 606 IDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQL-ANRMAD 430
I L ++ +A + E+N+S+ + N++ ++++ET ++ E E ++ ++ D
Sbjct: 558 ISQLNEENKIAKIQIEESNKSIQKYENDIEELKQNIETEKKQSENQITELQEIHKKQIED 617
Query: 429 IAQDVIAKPSNPQLCHSLAVCDVGNNEFAF--LRPQKRSLGRSLKRLGFNDVIFSSDYXP 256
I IAK + + V ++ N++ L+ + +SL + +L + I +
Sbjct: 618 INSQNIAKIQELENKNVNQVQEINNSQDQLHKLQEEIKSLNEQIAKLNDENKIINIQLEE 677
Query: 255 NSMNVXNKVKE 223
++ ++ ++++
Sbjct: 678 STKSIQKQIQD 688
>UniRef50_A4KXK8 Cluster: Bro20; n=1; Heliothis virescens ascovirus
3e|Rep: Bro20 - Heliothis virescens ascovirus 3e
Length = 191
Score = 34.3 bits (75), Expect = 3.2
Identities = 19/85 (22%), Positives = 43/85 (50%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADL 562
LIM S++P A + Q W+ +++P++ G+Y + + +I + ++ + LT N
Sbjct: 105 LIMSSRMPRARKFQRWVFSDLLPKLCQNGQY--DMRTEAPPMIVESMNVVRILTTNNDSE 162
Query: 561 AEANRSLILFANEMIVARRDVETAR 487
+ + + + ++ R+V AR
Sbjct: 163 RPRSTAKVYEVTDELMQVREVSLAR 187
>UniRef50_Q9PAJ2 Cluster: Phage-related protein; n=22;
Gammaproteobacteria|Rep: Phage-related protein - Xylella
fastidiosa
Length = 530
Score = 34.3 bits (75), Expect = 3.2
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIA 610
LI+ SKLP A + W+ EE++P + TG PA++ T+ A
Sbjct: 238 LIVSSKLPAAERFERWVFEELLPTLRKTGN-RPALDHSTHSANA 280
>UniRef50_Q8R8M0 Cluster: Membrane proteins related to
metalloendopeptidases; n=3; Thermoanaerobacter|Rep:
Membrane proteins related to metalloendopeptidases -
Thermoanaerobacter tengcongensis
Length = 389
Score = 34.3 bits (75), Expect = 3.2
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = -1
Query: 720 PYAIELQEWL--LEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADLAEANR 547
P A +LQ+ L ++ ++ T K + ND+ A++ +L +KL + + LAEA +
Sbjct: 35 PRADQLQDAKNKLNQIQKTLVETQKRKQEIINQKNDIAAQLKELDKKLNLTSQQLAEAQK 94
Query: 546 SLILFANEMIVARRDVETARQ 484
L ++ R+D+E A++
Sbjct: 95 RLREVTAKLEKTRKDLEEAKK 115
>UniRef50_Q0B1F4 Cluster: Beta-lactamase domain protein; n=1;
Burkholderia ambifaria AMMD|Rep: Beta-lactamase domain
protein - Burkholderia cepacia (strain ATCC 53795 /
AMMD)
Length = 538
Score = 34.3 bits (75), Expect = 3.2
Identities = 26/73 (35%), Positives = 36/73 (49%)
Frame = -1
Query: 393 QLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGFNDVIFSSDYXPNSMNVXNKVKEAIP 214
QL H + VG N F PQ SL +L++LGF+DV+ D + V N AIP
Sbjct: 321 QLRHKVKTVVVGRNLDGF--PQDPSLQLALRKLGFDDVLEVRD--AQEIKVTNGAITAIP 376
Query: 213 RNKFKAKHNRITL 175
F +HN + +
Sbjct: 377 ---FLGEHNDLAI 386
>UniRef50_A4TY81 Cluster: Putative uncharacterized protein; n=1;
Magnetospirillum gryphiswaldense|Rep: Putative
uncharacterized protein - Magnetospirillum
gryphiswaldense
Length = 372
Score = 34.3 bits (75), Expect = 3.2
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -1
Query: 609 KIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQ-DCEXARRETAQLANRMA 433
KIDDL ++ D+A N +L A + R ++ A Q D R +A R++
Sbjct: 150 KIDDLPSRIVTETVDMAPVNANLETIAERVASVERKIDEANQIDIAPLRESLDTIARRVS 209
Query: 432 DIAQDVIAKPSN 397
I + + P +
Sbjct: 210 RIERRIETTPKD 221
>UniRef50_A3M6B7 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 220
Score = 34.3 bits (75), Expect = 3.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 649
+I +S P A + Q+W+ EV+P + TGKY
Sbjct: 31 IIFRSNKPEAKQFQDWVFNEVLPTIRKTGKY 61
>UniRef50_Q757P9 Cluster: AEL037Cp; n=1; Eremothecium gossypii|Rep:
AEL037Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 466
Score = 34.3 bits (75), Expect = 3.2
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 338 RNANSLLPTSHTARLWHSCGLLGLAITSCAMSAMRLASCAVSRRAXSQSCRAVSTS-RRA 514
RN LP+S TA + G ++CA + +S A S RA +++ RA T A
Sbjct: 233 RNPAGPLPSSPTAHRRTTAGHTRPNFSACARATCS-SSSASSHRASTRAARAPPTPPTTA 291
Query: 515 TIISLANKMSDRLASAKSALATVNFC 592
T A+ + RLASA +A + + C
Sbjct: 292 TTAPRASALPARLASAYTASTSSSLC 317
>UniRef50_O01761 Cluster: Muscle M-line assembly protein unc-89; n=12;
Caenorhabditis|Rep: Muscle M-line assembly protein unc-89
- Caenorhabditis elegans
Length = 8081
Score = 34.3 bits (75), Expect = 3.2
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 648 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVE 496
A + N +I KIDD T +L + +ADL +A + NE A+ D +
Sbjct: 4816 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866
>UniRef50_UPI000023E3E4 Cluster: hypothetical protein FG02793.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG02793.1 - Gibberella zeae PH-1
Length = 1139
Score = 33.9 bits (74), Expect = 4.2
Identities = 18/89 (20%), Positives = 41/89 (46%)
Frame = -1
Query: 654 KYAPAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCE 475
K +E D N AK+D+L L ++ +E + L +N ++++ ++ E
Sbjct: 413 KQLKQLEEDKNAHTAKVDELEVSLASSDKRTSELDAELAKASNAKNISKKLIDDLNNQIE 472
Query: 474 XARRETAQLANRMADIAQDVIAKPSNPQL 388
+ E + ++ D+ + + +KP+ L
Sbjct: 473 TLKNEKSDSQTKITDLTKKLESKPAPAML 501
>UniRef50_Q89ZN5 Cluster: RNA-directed DNA polymerase; n=5;
Bacteroides|Rep: RNA-directed DNA polymerase -
Bacteroides thetaiotaomicron
Length = 377
Score = 33.9 bits (74), Expect = 4.2
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 288 NDVIFSSDYXPNSMNVXNKVKEAIPRNKFKAKHNRITLLEDYTREELMNV 139
+D+ FS D P V +VKE I KF+ H + L +Y R+ + V
Sbjct: 250 DDLTFSGDVFPKDQ-VLARVKEIIREEKFEPNHQKTRFLNEYDRKIITGV 298
>UniRef50_Q826G9 Cluster: Putative uncharacterized protein; n=1;
Streptomyces avermitilis|Rep: Putative uncharacterized
protein - Streptomyces avermitilis
Length = 1399
Score = 33.9 bits (74), Expect = 4.2
Identities = 25/62 (40%), Positives = 31/62 (50%)
Frame = -1
Query: 585 LTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQLANRMADIAQDVIAK 406
LT A A AEA R+ FA + A R+ E AR ARRE A+ AQD+ A
Sbjct: 826 LTDAWARTAEAERTAESFAGQAATAAREAEQARAGAVVARREAEATAS-----AQDLPAD 880
Query: 405 PS 400
P+
Sbjct: 881 PA 882
>UniRef50_Q0LH86 Cluster: Band 7 protein; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Band 7 protein -
Herpetosiphon aurantiacus ATCC 23779
Length = 744
Score = 33.9 bits (74), Expect = 4.2
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = -1
Query: 609 KIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQLANRMAD 430
+ID +TQ AE R+ I ++ +ARR+ T+++ + R ++ R AD
Sbjct: 219 EIDQMTQTEIAKRNATAEQERNTIERQKQLEIARRNASTSQEQNDIERSSELEITRRNAD 278
Query: 429 IAQD 418
+ Q+
Sbjct: 279 VDQE 282
>UniRef50_A7A2N3 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis L2-32|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
L2-32
Length = 263
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD 628
LIM+S+ P A E Q W+ EV+P + G Y +D
Sbjct: 79 LIMRSRKPEAKEFQRWVTHEVLPSIRKHGAYMTQQTLD 116
>UniRef50_A3DFZ3 Cluster: BRO-like protein; n=1; Clostridium
thermocellum ATCC 27405|Rep: BRO-like protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 265
Score = 33.9 bits (74), Expect = 4.2
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 646
LI+KS+LP A ++W+ +EV+P + G YA
Sbjct: 79 LIVKSQLPAAERFEKWVFDEVLPTIRKYGVYA 110
>UniRef50_A2U920 Cluster: Putative uncharacterized protein; n=1;
Bacillus coagulans 36D1|Rep: Putative uncharacterized
protein - Bacillus coagulans 36D1
Length = 153
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/72 (20%), Positives = 36/72 (50%)
Frame = -1
Query: 630 DTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQ 451
D ++ + L Q + +++AE + + ++ V ++DV +QD +++ A
Sbjct: 40 DVAELKQDVTVLKQDVASLKSEMAEVKQDVAGLKQDVAVLKQDVAELKQDVAVLKQDVAS 99
Query: 450 LANRMADIAQDV 415
L + A++ QD+
Sbjct: 100 LKSERAEVKQDI 111
>UniRef50_Q68Y46 Cluster: Unknow protein; n=4; Oryza sativa|Rep:
Unknow protein - Oryza sativa subsp. japonica (Rice)
Length = 410
Score = 33.9 bits (74), Expect = 4.2
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Frame = -1
Query: 609 KIDDLTQKLTVANADLA--EA-NRSLILFANEMIVARRDVETARQDCEXARRET-AQLAN 442
+ID+L KLT +AD+A EA N L+ A E A ++ T +D E A RE+ A+ A
Sbjct: 248 EIDELRAKLTSKDADIAAVEADNAELMKMAEEASHAVKETATKARDTEHALRESAAREAA 307
Query: 441 RMAD 430
R+A+
Sbjct: 308 RVAE 311
>UniRef50_Q4H4B6 Cluster: Scribble1; n=16; Euteleostomi|Rep:
Scribble1 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 1724
Score = 33.5 bits (73), Expect = 5.6
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = -1
Query: 432 DIAQDVIAK-PSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGFNDVIFSSDYXP 256
DI+++ I++ P N + C SL + D N L P + R L L NDV S P
Sbjct: 88 DISRNDISEIPENIKFCQSLEIADFSGNPLTRL-PDGFTQLRGLAHLSLNDVSLQS--LP 144
Query: 255 NSM-NVXNKVKEAIPRNKFKAKHNRITLL 172
N + N+ N V + N K+ + ++ L
Sbjct: 145 NDIGNLSNLVTLELRENLLKSLPSSLSFL 173
>UniRef50_Q81ZL2 Cluster: SMC protein; n=4; Coxiella burnetii|Rep:
SMC protein - Coxiella burnetii
Length = 1169
Score = 33.5 bits (73), Expect = 5.6
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = -1
Query: 636 EMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDV-ETARQDCEXARRE 460
++ + ++ +I L+ + + NA+L+++ L A E I +RRD +T R++ + RRE
Sbjct: 428 QLQLDQLLNEIAPLSSQSELLNAELSDSQSKLQSLA-ETIASRRDANQTTREELQTQRRE 486
Query: 459 TAQLANRMADI 427
L R A +
Sbjct: 487 LQALEARAASL 497
>UniRef50_Q6NK48 Cluster: Putative anti-repressor protein; n=3;
Corynebacterium|Rep: Putative anti-repressor protein -
Corynebacterium diphtheriae
Length = 272
Score = 33.5 bits (73), Expect = 5.6
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEM-----DTNDVIAKIDDLTQKLTV 577
L+ +S++P A E + W+ EV+P++ G YA + D I ++ + Q+
Sbjct: 76 LLFQSRVPQAKEFRRWVTGEVLPEIRRHGMYATTATVEQMLADPTTAIKLLEQIKQERDQ 135
Query: 576 ANADLAEA--NRSLILFANEMIVARRDV 499
A +A ++ ++FA+ + A D+
Sbjct: 136 RRALEVQAAIDKPKVMFADAVAEANTDI 163
>UniRef50_Q1NM38 Cluster: Response regulator receiver precursor;
n=2; delta proteobacterium MLMS-1|Rep: Response
regulator receiver precursor - delta proteobacterium
MLMS-1
Length = 1295
Score = 33.5 bits (73), Expect = 5.6
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -1
Query: 591 QKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQ-LAN 442
++L V+N +L E +RSL E+ ARR++ET +D E + R ++ LAN
Sbjct: 524 EELRVSNEELEERSRSLAEKNRELDRARRELETKARDLETSGRYKSEFLAN 574
>UniRef50_A5V9T8 Cluster: Putative uncharacterized protein; n=1;
Sphingomonas wittichii RW1|Rep: Putative uncharacterized
protein - Sphingomonas wittichii RW1
Length = 261
Score = 33.5 bits (73), Expect = 5.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 432 PPCGWPAAPFXGARFRNLAEPFQRRVEPQSFR 527
PPCGW +PF G +++A RR P + R
Sbjct: 42 PPCGWSPSPFRGGSQKDMAMTDARRFAPATAR 73
>UniRef50_A3QSE3 Cluster: Putative antirepressor; n=1; Clostridium
phage phiC2|Rep: Putative antirepressor - Clostridium
phage phiC2
Length = 212
Score = 33.5 bits (73), Expect = 5.6
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDL 595
LI+ S LP A + + W+ +EV+P + TG+Y + T ++ I DL
Sbjct: 75 LIVGSNLPNAEKFESWVFDEVLPTIRQTGQYQAQQNVIT-ELTGTIGDL 122
>UniRef50_Q9Y005 Cluster: Lamin; n=1; Priapulus caudatus|Rep: Lamin
- Priapulus caudatus
Length = 568
Score = 33.5 bits (73), Expect = 5.6
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = -1
Query: 633 MDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETA 454
+D N ++ D+L KL DL A RSL ++ +TA +D + A E
Sbjct: 110 IDCNKYQSENDELRTKLARLTRDLTGAQRSLTTAETQVPDLTIKYDTANKDRKKAEDELR 169
Query: 453 QLANRMADIAQDVIAKPS 400
QL MAD + A S
Sbjct: 170 QLKKDMADFQTQLSAARS 187
>UniRef50_A2E9D7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 509
Score = 33.5 bits (73), Expect = 5.6
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = -1
Query: 390 LCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGFNDVIFSSDYXPNSMNVXNKVKEAIPR 211
L + VCD + +F L + SL + + + +F S P + + +K+K +P
Sbjct: 386 LLEQMMVCDNPDPKFILLFRKWMSLSQPFIKFSYISKLFMSYLQPLFVTMTSKLKVNLPN 445
Query: 210 NKFKAKHNRITLLEDY 163
N + N + LLE Y
Sbjct: 446 NLNEFNQNFVVLLEVY 461
>UniRef50_O94317 Cluster: Sequence orphan; n=1; Schizosaccharomyces
pombe|Rep: Sequence orphan - Schizosaccharomyces pombe
(Fission yeast)
Length = 534
Score = 33.5 bits (73), Expect = 5.6
Identities = 33/143 (23%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Frame = +2
Query: 281 TSLKPNRFKLRPSDRFCGRRNANSLLPTSHTARLWHSCGLLGLAITSCAMSAMRLASCAV 460
+SL + +PS +S PTS ++ S ++ + + + S+ L S ++
Sbjct: 176 SSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSL 235
Query: 461 SRRAXSQSCRAVSTSRRATIISLANKMSDRLASAKSALATV---NFCVRSSILAITSFVS 631
S + S + S+S +T SL++ S AS+ S+ +++ + SS + +S +S
Sbjct: 236 S----TSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTIS 291
Query: 632 ISTAGAYLPVHST*GMTSSKSHS 700
S++ + P ++ ++SS S S
Sbjct: 292 SSSSSSSSPTSTSSTISSSSSSS 314
>UniRef50_Q5V6I5 Cluster: Bacterio-opsin activator-like protein;
n=1; Haloarcula marismortui|Rep: Bacterio-opsin
activator-like protein - Haloarcula marismortui
(Halobacterium marismortui)
Length = 955
Score = 33.5 bits (73), Expect = 5.6
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = -1
Query: 615 IAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQLANRM 436
+ DD+TQ+LT A AEA +L A E + ++D E RQ+ + Q+ N +
Sbjct: 510 VGAFDDVTQELTDLLAATAEA--ALDRVARESQLRKQDRELQRQNEQLTALN--QINNTI 565
Query: 435 ADIAQDVIAKPSNPQLCHSLA--VCDVGNNEFAFL 337
+I Q +++ + ++ H++ + D +FA++
Sbjct: 566 REIDQTIVSAETKEEITHTVCERLTDTDRFKFAWI 600
>UniRef50_Q9UPT6 Cluster: C-jun-amino-terminal kinase-interacting
protein 3; n=86; Coelomata|Rep: C-jun-amino-terminal
kinase-interacting protein 3 - Homo sapiens (Human)
Length = 1336
Score = 33.5 bits (73), Expect = 5.6
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = -1
Query: 642 AVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARR 463
A+ + ND+IAK+D L+ + V +L A ++ + N + +++ + + ARR
Sbjct: 436 ALNVVKNDLIAKVDQLSGEQEVLRGELEAAKQAKVKLENRIKELEEELKRVKSEAIIARR 495
Query: 462 ETAQLA 445
E + A
Sbjct: 496 EPKEEA 501
>UniRef50_Q92FM4 Cluster: Lin0080 protein; n=14; root|Rep: Lin0080
protein - Listeria innocua
Length = 257
Score = 33.1 bits (72), Expect = 7.4
Identities = 20/45 (44%), Positives = 23/45 (51%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAK 607
LI KSKL A Q+W+ EV+P V G Y TND I K
Sbjct: 77 LIFKSKLESAERFQDWVTSEVLPSVRKHGAYM------TNDTIEK 115
>UniRef50_Q1Q4M1 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 314
Score = 33.1 bits (72), Expect = 7.4
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = -1
Query: 498 ETARQDCEXARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRS 319
E R+D A ++ ++ N+M +A+D +A P+ ++ C+ G+ E +R KR
Sbjct: 153 EEMRKDRARAFKQWGEITNKMGTLAEDFVA-PNVGEIAMRYFCCEEGSEEDFMVRRFKRK 211
Query: 318 LGRSLKRLGFNDVI 277
KR F DVI
Sbjct: 212 PKTKSKRREF-DVI 224
>UniRef50_A4J193 Cluster: Putative uncharacterized protein; n=1;
Desulfotomaculum reducens MI-1|Rep: Putative
uncharacterized protein - Desulfotomaculum reducens MI-1
Length = 311
Score = 33.1 bits (72), Expect = 7.4
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Frame = -1
Query: 471 ARRETAQ-LANRMADIAQDVIAKPSNPQLCHSLAVCDV-GNNEFAFLRPQK-RSLGRSLK 301
AR E A +A DI VI N + H D+ G E + K L ++LK
Sbjct: 179 ARNENADAVAENFKDIGDKVIEY--NRTILHG----DIAGKREILLVLGDKFEPLRKTLK 232
Query: 300 RLGFNDVIFSSDYXPNSMNVXNKVKEAIPRNKF--KAKHNRITLLEDYTREELM 145
GF D+ + + NS+N+ + KE +NKF AK + D T E L+
Sbjct: 233 GHGFGDLESNIGFLLNSINIRHNNKEGTNKNKFVVSAKPEELEKWYDTTYELLL 286
>UniRef50_A5YK15 Cluster: Gp47; n=3; unclassified Siphoviridae|Rep:
Gp47 - Mycobacterium phage Tweety
Length = 334
Score = 33.1 bits (72), Expect = 7.4
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVA--NA 568
L+M S+ P + W+ EV+P + TG Y+ +DTN + L Q + A A
Sbjct: 151 LLMISRSPKVKPFKRWMTHEVLPSIRKTGGYS---AVDTNIALPDRKTLAQWVVEAETRA 207
Query: 567 DLAEA 553
+LAEA
Sbjct: 208 ELAEA 212
>UniRef50_Q9YMQ6 Cluster: Ld-bro-c; n=6; dsDNA viruses, no RNA
stage|Rep: Ld-bro-c - Lymantria dispar multicapsid
nuclear polyhedrosis virus (LdMNPV)
Length = 528
Score = 32.7 bits (71), Expect = 9.7
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTN-DVIAKIDDLTQKL----TV 577
L+ +S P A E +++ E ++P + TGK+ + N + KI L +K+ TV
Sbjct: 101 LMARSTKPMAKEKMKFVYETILPTIRKTGKFEMNKTSNINYETEMKIKLLEEKMEHQSTV 160
Query: 576 ANAD--LAEANRSLILFANEMIVARRDVETARQD 481
A D LAEAN L+ E +A D + A ++
Sbjct: 161 ARNDSKLAEANMKLV--EKERTIAVYDAKLAEKE 192
>UniRef50_Q4KT11 Cluster: BRO-B; n=2; Nucleopolyhedrovirus|Rep:
BRO-B - Chrysodeixis chalcites nucleopolyhedrovirus
Length = 635
Score = 32.7 bits (71), Expect = 9.7
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAK 607
LI SK+P A E ++W+ +++P++ G+Y V++ N+ K
Sbjct: 89 LIQNSKMPKAQEFKQWINFDLLPKLCDKGRYDMQVDVLANNCAQK 133
>UniRef50_Q9AAB9 Cluster: HlyD family secretion protein; n=1;
Caulobacter vibrioides|Rep: HlyD family secretion
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 378
Score = 32.7 bits (71), Expect = 9.7
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -1
Query: 612 AKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQL-ANRM 436
A+ LTQ+ N +LAEA RSL L + +AR +V A +L A R
Sbjct: 103 AESRQLTQRRAALNRELAEAKRSLALQTERLTLARAEVARAETIAAQGFLSPRELQARRS 162
Query: 435 ADIA 424
A++A
Sbjct: 163 AELA 166
>UniRef50_Q97TJ9 Cluster: Membrane protein; n=1; Clostridium
acetobutylicum|Rep: Membrane protein - Clostridium
acetobutylicum
Length = 1058
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -1
Query: 612 AKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQLANRMA 433
+K+ D+ +T A L EAN SL N + A+ + + E R + +AN++A
Sbjct: 646 SKLQDMVDAITKLKAGLDEANSSLKKANNGLSQAQSGIGAMKSGSEALRSGSLTMANKLA 705
Query: 432 DIA 424
+ A
Sbjct: 706 EAA 708
>UniRef50_Q89Q49 Cluster: Bll3281 protein; n=4; Proteobacteria|Rep:
Bll3281 protein - Bradyrhizobium japonicum
Length = 455
Score = 32.7 bits (71), Expect = 9.7
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +2
Query: 386 HSCGLLGLAITSCAMSAMRLASCAVSRRAXSQSCRAVSTSRRATIISLANKMSDRLASAK 565
HS + A+T+ M+A+ A A+ R +++ AV T+ A ++ A + DRL + +
Sbjct: 6 HSAREIAAAVTAGRMTAVDTAKAALGRIDAAKALNAVVTTDPARTLADAAAVDDRLRAGE 65
Query: 566 S-ALATVNFCVRSSILA 613
+ LA V V+ +I A
Sbjct: 66 TMPLAGVPILVKDNIWA 82
>UniRef50_Q47HX8 Cluster: BRO, N-terminal; n=1; Dechloromonas
aromatica RCB|Rep: BRO, N-terminal - Dechloromonas
aromatica (strain RCB)
Length = 111
Score = 32.7 bits (71), Expect = 9.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 741 LIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 649
LIM+S P A Q+W+ +EV+P + TG +
Sbjct: 67 LIMRSDKPQAKAFQDWVTKEVLPSIRKTGSF 97
>UniRef50_Q3W8C4 Cluster: Regulatory protein, LuxR; n=1; Frankia sp.
EAN1pec|Rep: Regulatory protein, LuxR - Frankia sp.
EAN1pec
Length = 989
Score = 32.7 bits (71), Expect = 9.7
Identities = 28/86 (32%), Positives = 41/86 (47%)
Frame = -1
Query: 621 DVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETAQLAN 442
DV+ ++DD +T+A A AEA R +AR D A D ARRET L
Sbjct: 882 DVLRRLDDPHAAVTLAGAAAAEARR----LDMPGPLARADQLLA--DLAAARRETDPLTA 935
Query: 441 RMADIAQDVIAKPSNPQLCHSLAVCD 364
R ++A V+ SN ++ L + +
Sbjct: 936 REHEVAALVVQAMSNREIAARLVLSE 961
>UniRef50_Q3R2M5 Cluster: BRO, N-terminal; n=8; Xylella
fastidiosa|Rep: BRO, N-terminal - Xylella fastidiosa
Ann-1
Length = 264
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -1
Query: 732 KSKLPYAIELQEWLLEEVIPQVLCTGKYA--PAVEMDTNDVIAKIDDLTQKLTVANA 568
+S P A+ Q+WL EV+P + TG+Y P +E D +K ++L A++
Sbjct: 83 RSDKPKALPFQKWLAGEVLPSIRKTGEYTVNPDLEYDQMRSYSKDRKQMEELNTAHS 139
>UniRef50_Q29XV9 Cluster: Possible RNAase; n=17; Campylobacter|Rep:
Possible RNAase - Campylobacter jejuni
Length = 515
Score = 32.7 bits (71), Expect = 9.7
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = -1
Query: 642 AVEMDTNDVIAKIDD-LTQKLTVANADLAEAN--RSLILFANEMIVARRDVETARQDCEX 472
A E T ++ +D+ L+ K TV D N +L AN+ D+ R
Sbjct: 243 AFEFRTEELRMNLDENLSLKSTVFEKDTPSHNLIEDCMLLANKAAAKLIDIGVFRNHLSA 302
Query: 471 ARRETAQLANRMADIAQDVIAKPSNPQLCHSL 376
R+ +L N + ++ DV KP+ P+L +
Sbjct: 303 DARKIDKLLNELRELGIDVNFKPNLPELIRDI 334
>UniRef50_A7DK69 Cluster: Efflux transporter, RND family, MFP
subunit; n=3; Alphaproteobacteria|Rep: Efflux
transporter, RND family, MFP subunit - Methylobacterium
extorquens PA1
Length = 441
Score = 32.7 bits (71), Expect = 9.7
Identities = 25/91 (27%), Positives = 43/91 (47%)
Frame = -1
Query: 633 MDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXARRETA 454
++ DV+ KID ++ +A+A+ ANR L R + AR A+ +TA
Sbjct: 105 VNEGDVLYKIDPAPYQVDLASAEATLANREAALVLANQQADRLETLLARNTASQAQYDTA 164
Query: 453 QLANRMADIAQDVIAKPSNPQLCHSLAVCDV 361
A + A+ A+ AK + + +L+ DV
Sbjct: 165 FAAKKQAE-AEVAGAKAARDRARLNLSWTDV 194
>UniRef50_A6CD54 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 797
Score = 32.7 bits (71), Expect = 9.7
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = -1
Query: 324 RSLGRSLKRLGFNDVIFSSDYXPNSMNVXNKVKEAIPRNKFKAKHNRITLLEDYTREELM 145
RS G S+K+L ++ S Y +S + V++A P NK +HNR L + R+ ++
Sbjct: 570 RSEGWSIKQL-IRSIVLSRTYQQSSFCEAD-VRDADPENKLLCRHNRRRLDAESLRDSIL 627
Query: 144 NVIGSTMTD 118
G D
Sbjct: 628 ATSGQLNPD 636
>UniRef50_A3L404 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas aeruginosa C3719|Rep: Putative
uncharacterized protein - Pseudomonas aeruginosa C3719
Length = 196
Score = 32.7 bits (71), Expect = 9.7
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -1
Query: 633 MDTNDVIAKIDDLTQKLTVANA-DLAEANRSL-ILFANEMIVARRDVETARQDCEXARRE 460
MD D DD +L +A A + A N +L + F+ + + +E + E ARR
Sbjct: 4 MDELDFSGLSDDQLVELAIAIANEAARRNPALQVAFSEALATEKEKIEARLRGAERARRY 63
Query: 459 TAQLANRMADIAQDVIA 409
Q A R+A+ A +A
Sbjct: 64 EIQQAERVAEAAGKAVA 80
>UniRef50_A1HPR4 Cluster: Histidine kinase; n=1; Thermosinus
carboxydivorans Nor1|Rep: Histidine kinase - Thermosinus
carboxydivorans Nor1
Length = 377
Score = 32.7 bits (71), Expect = 9.7
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -1
Query: 639 VEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDVETARQDCEXA-RR 463
V+ T D+I K+D+L ++ A LAE +R+ +++ I A D E +R E A R
Sbjct: 49 VKQATADIIFKVDELERQERRARLRLAEVSRNFTVYSEADIKAAYD-EASRLQVELAIAR 107
Query: 462 ETAQLANRMAD 430
E + R D
Sbjct: 108 EQEAVLRRQRD 118
>UniRef50_A0TWB4 Cluster: Putative uncharacterized protein; n=1;
Burkholderia cenocepacia MC0-3|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 265
Score = 32.7 bits (71), Expect = 9.7
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +2
Query: 311 RPSDRFCGRRNANSLLPTSHTARLWHSCGLLGLAITSCAMSAMRLASCAVSRRAXS--QS 484
R + CGR +S +P SHT R W + L + +S + + S SR + S S
Sbjct: 47 RVNSTVCGRSKISSAVPLSHT-RPWCMNTIRSLTARAKFISCVTMISVMSSRASCSTTPS 105
Query: 485 CRAVSTSRRATIISLANKMSDRLASAKSALAT 580
S+ A +IS + +ASA+ A+AT
Sbjct: 106 TSPTSSGSSADVISSHSSTLGFIASAR-AIAT 136
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,026,923
Number of Sequences: 1657284
Number of extensions: 13461723
Number of successful extensions: 40886
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 39202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40827
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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