Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc12d22
         (891 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            29   0.25 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    27   0.58 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    27   1.0  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   4.1  
AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical prote...    24   5.4  
AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosens...    24   5.4  
Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease prot...    23   9.4  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 28.7 bits (61), Expect = 0.25
 Identities = 13/51 (25%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = -1

Query: 798  AYKNFNDDSDVVQVE-CFVNAKTLMNLFKNNIKGSDDINEVFKYLKDNENQ 649
            +Y N  +++ V+++E C   ++   ++   + K ++ INE+F++  + ENQ
Sbjct: 2999 SYHNITNNNSVMRLEYCIDCSQDASSITSKSYKVTNWINEIFEHFFNTENQ 3049


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 27.5 bits (58), Expect = 0.58
 Identities = 13/44 (29%), Positives = 27/44 (61%)
 Frame = -1

Query: 516  QNCTNARINISRSNKRVASYNVNMLKSELEENDMSDNKFIVQFK 385
            + CTNA +++  +     S++ N+LK+ +  ND++DN  + + K
Sbjct: 1474 EECTNANLSLDTT-----SHSGNLLKATVYINDINDNSPVFESK 1512


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 857 STNLFTRKSTAICTKLFLKSRTKILTTIPT 768
           +T+ +T KS  +C +LFL  R   L TIPT
Sbjct: 99  TTSTWTSKSV-LCEELFLFLRRSSLVTIPT 127


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 240  ISMLLEDNLIKVTIYVTVENGENGNMNVLGLLKYDEDENDYTF 112
            ++ LLE+++ KV   V ++NG N   N L  +    D +  T+
Sbjct: 990  LTALLENDIAKVKHAVVIQNGMNYLSNQLAFINNPYDLSIATY 1032


>AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical protein
           protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 15/66 (22%), Positives = 29/66 (43%)
 Frame = -1

Query: 813 IVFEVAYKNFNDDSDVVQVECFVNAKTLMNLFKNNIKGSDDINEVFKYLKDNENQIFTIY 634
           ++ E A + +    D + +E   ++K LM+ + N +K         + LKDN        
Sbjct: 14  VLGETANETYVTKYDNIDLEEIFSSKRLMDNYMNCLKNVGPCTPDGRELKDNLPDALMSD 73

Query: 633 NIKCQQ 616
            +KC +
Sbjct: 74  CVKCSE 79


>AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosensory
           protein CSP3 protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 15/66 (22%), Positives = 29/66 (43%)
 Frame = -1

Query: 813 IVFEVAYKNFNDDSDVVQVECFVNAKTLMNLFKNNIKGSDDINEVFKYLKDNENQIFTIY 634
           ++ E A + +    D + +E   ++K LM+ + N +K         + LKDN        
Sbjct: 14  VLGETANETYVTKYDNIDLEEIFSSKRLMDNYMNCLKNVGPCTPDGRELKDNLPDALMSD 73

Query: 633 NIKCQQ 616
            +KC +
Sbjct: 74  CVKCSE 79


>Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 736 FRIDKTFHLN 765
           FR+DK FHLN
Sbjct: 128 FRVDKPFHLN 137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,731
Number of Sequences: 2352
Number of extensions: 15893
Number of successful extensions: 41
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)