Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12d22
(891 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 29 0.043
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 27 0.17
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 27 0.17
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 24 1.6
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 24 1.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 2.1
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 23 3.7
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 3.7
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 23 4.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 6.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 6.5
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 29.5 bits (63), Expect = 0.043
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Frame = -1
Query: 600 NVYMNWNVVNSTRIELCEAKENEAYSNLQNCTNARINI------SRSNKRVASYNVNMLK 439
+VY+ WN+ + R+ L + EA + T +R + ++R + L+
Sbjct: 257 SVYLRWNLTSGERVGLVGGRVKEALRIARQMTTSRKKVLPYYWYKYQDRRDTDLSRADLE 316
Query: 438 SELEE-NDMSDNKFIVQFKSDDLN 370
+ L + D+ + FI+ SDD+N
Sbjct: 317 ATLRKITDLGADGFIIWGSSDDIN 340
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 27.5 bits (58), Expect = 0.17
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 798 AYKNFNDDSDVVQVECFVNAKTLMNLFKNNIKGSDDINEV 679
A NF+++ +V ++ F N +N+F NN + DI +
Sbjct: 504 AILNFSNEEQIVDLKAFNNVPKKLNMFYNNF--NSDIKSI 541
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 27.5 bits (58), Expect = 0.17
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 798 AYKNFNDDSDVVQVECFVNAKTLMNLFKNNIKGSDDINEV 679
A NF+++ +V ++ F N +N+F NN + DI +
Sbjct: 504 AILNFSNEEQIVDLKAFNNVPKKLNMFYNNF--NSDIKSI 541
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 576 VNSTRIELCEAKENEAYSNLQNCTNAR 496
+ RI+ + KENE Y+NL + +
Sbjct: 325 ITPKRIQYAQHKENELYANLMKIVHEK 351
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 576 VNSTRIELCEAKENEAYSNLQNCTNAR 496
+ RI+ + KENE Y+NL + +
Sbjct: 363 ITPKRIQYAQHKENELYANLMKIVHEK 389
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.8 bits (49), Expect = 2.1
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -1
Query: 678 FKYLKDNENQIFTIYNIKCQQIFNGANVYMNWNVVNSTRIELCEAKENEAYSNLQ 514
F LKD+++Q + K +Q + NV+ T + L A + +A + LQ
Sbjct: 124 FSSLKDHQHQFAELGRKKLEQAIQQLQEQLQLNVIQQTHL-LQTADKKKASAPLQ 177
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -1
Query: 690 INEVFKYLKDNENQIFTIYNIKCQQIFNG 604
IN +FK + E + T ++++NG
Sbjct: 412 INNIFKNMSQIEREAITFQYTDWEEVYNG 440
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -1
Query: 690 INEVFKYLKDNENQIFTIYNIKCQQIFNG 604
IN +FK + E + T ++++NG
Sbjct: 412 INNIFKNMSQIEREAITFQYTDWEEVYNG 440
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -1
Query: 537 NEAYSNLQNCTNARINISRSNKRVASYNVN 448
N N+QN N N ++NK+ A+ N
Sbjct: 417 NNQNDNIQNTNNQNDNNQKNNKKNANNQKN 446
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -1
Query: 468 VASYNVNMLKSELEENDMSDNKFIVQFKSDDLNV 367
VAS ++N+ ++ K+I+Q+K D +
Sbjct: 919 VASRSINVKWQHKSQDTTEVTKYILQYKEGDAGI 952
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -1
Query: 468 VASYNVNMLKSELEENDMSDNKFIVQFKSDDLNV 367
VAS ++N+ ++ K+I+Q+K D +
Sbjct: 915 VASRSINVKWQHKSQDTTEVTKYILQYKEGDAGI 948
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,123
Number of Sequences: 438
Number of extensions: 4335
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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