Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12d19
(778 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O10348 Cluster: Uncharacterized 44.3 kDa protein; n=14;... 278 1e-73
UniRef50_Q9YMM0 Cluster: LdOrf-107 peptide; n=14; Nucleopolyhedr... 204 3e-51
UniRef50_Q287K6 Cluster: ORF-66; n=4; Nucleopolyhedrovirus|Rep: ... 169 7e-41
UniRef50_Q0IL08 Cluster: ORF111; n=2; Leucania separata nuclear ... 167 2e-40
UniRef50_Q9PYZ0 Cluster: ORF53; n=1; Xestia c-nigrum granuloviru... 115 1e-24
UniRef50_Q8JS09 Cluster: Putative uncharacterized protein PhopGV... 111 1e-23
UniRef50_Q7T9W9 Cluster: ORF_46; n=5; Granulovirus|Rep: ORF_46 -... 111 2e-23
UniRef50_A5IZP8 Cluster: Putative uncharacterized protein orf46;... 110 4e-23
UniRef50_Q9DVY9 Cluster: PxORF43 peptide; n=2; Granulovirus|Rep:... 103 5e-21
UniRef50_P41661 Cluster: Uncharacterized 11.8 kDa protein in HE6... 78 2e-13
UniRef50_O10347 Cluster: Uncharacterized 11.7 kDa protein; n=3; ... 50 6e-05
UniRef50_Q6JK90 Cluster: Putative uncharacterized protein; n=3; ... 40 0.069
UniRef50_A3HA67 Cluster: Putative uncharacterized protein precur... 39 0.12
UniRef50_A4AGL0 Cluster: Ribonuclease G; n=2; Actinobacteria (cl... 36 1.1
UniRef50_Q126X5 Cluster: Signal transduction histidine kinase; n... 35 2.6
UniRef50_A4BXH2 Cluster: Leucyl-tRNA synthetase; n=2; Bacteria|R... 35 2.6
UniRef50_A3H9B7 Cluster: Bacterio-opsin activator, HTH; n=1; Cal... 35 2.6
UniRef50_Q8IHR6 Cluster: Coat protein, gamma subunit, putative; ... 34 4.6
UniRef50_Q22DI5 Cluster: Longevity-assurance protein; n=1; Tetra... 34 4.6
UniRef50_A0EBL3 Cluster: Chromosome undetermined scaffold_88, wh... 34 4.6
UniRef50_Q9YW59 Cluster: Putative uncharacterized protein MSV032... 33 6.0
UniRef50_Q89J50 Cluster: Blr5434 protein; n=1; Bradyrhizobium ja... 33 6.0
UniRef50_Q1D9P1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_UPI000049833D Cluster: hypothetical protein 55.t00029; ... 33 8.0
UniRef50_Q7YYX8 Cluster: Putative uncharacterized protein; n=3; ... 33 8.0
>UniRef50_O10348 Cluster: Uncharacterized 44.3 kDa protein; n=14;
Nucleopolyhedrovirus|Rep: Uncharacterized 44.3 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 390
Score = 278 bits (682), Expect = 1e-73
Identities = 127/213 (59%), Positives = 170/213 (79%)
Frame = -1
Query: 778 LVESNDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLNWER 599
L ES+ FLLCFNLET TMVKIL LKRIFCIFQYRK PARYVINLPHEE+D+LYNKLNW R
Sbjct: 182 LTESDKFLLCFNLETPTMVKILCLKRIFCIFQYRKLPARYVINLPHEEVDSLYNKLNWAR 241
Query: 598 TRRLMKGDVPSNCATVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNV 419
TRRL++GD+PSNCATVNR+SL+Y+K AQ+LL I SQT+V+FV++FQ++IFPYQ+VP V
Sbjct: 242 TRRLLRGDIPSNCATVNRASLQYVKDAQTLLHIAKCSQTIVEFVRIFQQLIFPYQIVPIV 301
Query: 418 IIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPINMPDFSPSNNAFDYSDY 239
I+KLN+ ++ + ++R+FCKNDS+AI++ G VP+NMPD +P+ + FD +++
Sbjct: 302 IVKLNS----LNAKSGQTAHENRVRVFCKNDSVAITTAGCVPVNMPDAAPA-STFDNTEF 356
Query: 238 VNRTNINFVTQRVLIDGGFSSGVTVTPIKYNYY 140
+ ++ V RV +DG F+SGV V ++YNY+
Sbjct: 357 DDVAHLKQVANRVAVDGVFTSGVVVHAVRYNYF 389
>UniRef50_Q9YMM0 Cluster: LdOrf-107 peptide; n=14;
Nucleopolyhedrovirus|Rep: LdOrf-107 peptide - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 366
Score = 204 bits (497), Expect = 3e-51
Identities = 101/211 (47%), Positives = 138/211 (65%)
Frame = -1
Query: 772 ESNDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLNWERTR 593
++NDFLLCF LET +MVKILS+KR+ CIF++R+ PARY I LP E+D+++NKL WER R
Sbjct: 169 DNNDFLLCFKLETPSMVKILSVKRLMCIFEFRRVPARYAIYLPDREVDSIFNKLTWERVR 228
Query: 592 RLMKGDVPSNCATVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNVII 413
RLMKGD C VNR +L+YI+ A +LG+ SQ VV+ V+ F+ +I P+Q+VP +I+
Sbjct: 229 RLMKGDYKRVCVNVNRHALRYIQLAMDMLGVEASSQVVVNLVRAFEMLILPFQVVPEIIV 288
Query: 412 KLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPINMPDFSPSNNAFDYSDYVN 233
KLN E + +RL+CKNDS AI +G VP N+PD +P AFDY+D VN
Sbjct: 289 KLNT-----------VERQRSVRLYCKNDSFAIGLHGPVPNNLPDDNPI--AFDYAD-VN 334
Query: 232 RTNINFVTQRVLIDGGFSSGVTVTPIKYNYY 140
+ F + I G +TV +YNY+
Sbjct: 335 DSRHLFEVRESFIKRGHVDELTVVATRYNYF 365
>UniRef50_Q287K6 Cluster: ORF-66; n=4; Nucleopolyhedrovirus|Rep:
ORF-66 - Agrotis segetum nuclear polyhedrosis virus
(AsNPV)
Length = 356
Score = 169 bits (411), Expect = 7e-41
Identities = 88/209 (42%), Positives = 133/209 (63%)
Frame = -1
Query: 766 NDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLNWERTRRL 587
N+FL+CF ET V+ L++KRI IF+YRK PAR+ + ++ ++Y +L E RRL
Sbjct: 161 NNFLICFLRETPKRVRQLNVKRILTIFEYRKTPARFAYEMSDADVQDIYVELKNELVRRL 220
Query: 586 MKGDVPSNCATVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNVIIKL 407
+KGD +C +N +L+YIK+AQ LL +PD SQT+V+F+ MFQ ++ PY +VP++IIKL
Sbjct: 221 IKGDTSQHCPYLNIPNLQYIKRAQQLLLVPDSSQTIVNFINMFQVLVLPYMIVPDIIIKL 280
Query: 406 NNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPINMPDFSPSNNAFDYSDYVNRT 227
N+ D+ +K+RL+CKNDS AI+S G VP NM + +P AFDYSD
Sbjct: 281 NSLDR-----------ERKVRLYCKNDSYAITSFGPVPNNMVEDNPV--AFDYSDINTPY 327
Query: 226 NINFVTQRVLIDGGFSSGVTVTPIKYNYY 140
++N + + L + + V+ +YNY+
Sbjct: 328 HLNTMRDK-LYESTRIDNLIVSAARYNYF 355
>UniRef50_Q0IL08 Cluster: ORF111; n=2; Leucania separata nuclear
polyhedrosis virus|Rep: ORF111 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 364
Score = 167 bits (407), Expect = 2e-40
Identities = 87/210 (41%), Positives = 132/210 (62%), Gaps = 2/210 (0%)
Frame = -1
Query: 763 DFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLNWERTRRLM 584
+F++ F++ TS M+KIL++KRI +F RK ARY IN+ EID++Y+KL WER RRLM
Sbjct: 168 NFIISFDMSTSDMIKILNIKRILTMFSMRKVRARYAINMADAEIDDIYSKLRWERARRLM 227
Query: 583 KG--DVPSNCATVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNVIIK 410
KG P +C V+R SL YI A+ LLGIPDY++T +DFV+ F+ +I P +++P V +K
Sbjct: 228 KGGPTTPKDCVMVDRESLSYINIAKMLLGIPDYARTTLDFVEKFEVLIVPARIIPEVFVK 287
Query: 409 LNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPINMPDFSPSNNAFDYSDYVNR 230
LN+ + ++Y +R++C NDS AI+ +G+VP N + +P FDYSD V+
Sbjct: 288 LNSIE---------TKTY--MRIYCVNDSYAITEHGLVPNNSANINPIK--FDYSD-VSN 333
Query: 229 TNINFVTQRVLIDGGFSSGVTVTPIKYNYY 140
N ++ L + + + P YNY+
Sbjct: 334 PNYLISLRKNLFERHDIYDIRIRPAYYNYF 363
>UniRef50_Q9PYZ0 Cluster: ORF53; n=1; Xestia c-nigrum
granulovirus|Rep: ORF53 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 353
Score = 115 bits (277), Expect = 1e-24
Identities = 61/173 (35%), Positives = 97/173 (56%), Gaps = 1/173 (0%)
Frame = -1
Query: 766 NDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLNWERTRRL 587
N F + F ET +KIL++KR+ +F ++ P +Y INL HEE + +L WE +RRL
Sbjct: 162 NSFTIHFPRETPMGIKILNVKRLLILFSSKETPVKYSINLCHEEKVLIQKELTWENSRRL 221
Query: 586 MKGDVPSNCATVNRSSLKYIKQAQSLLGI-PDYSQTVVDFVKMFQKIIFPYQLVPNVIIK 410
++ ++C N SS+KY+ +LGI D +V V++F ++ Y++VP+V +
Sbjct: 222 LRSGKGASCTMYNTSSIKYVTDTLEILGINRDSVVSVHSLVEIFNPLVLRYRVVPDVFLH 281
Query: 409 LNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPINMPDFSPSNNAFD 251
+N+ + K +RL+C+ DS+AIS G+VPIN P S FD
Sbjct: 282 INSMTKYR----------KHVRLYCEGDSLAISPAGVVPINRPTHSVKKFEFD 324
>UniRef50_Q8JS09 Cluster: Putative uncharacterized protein
PhopGV050; n=1; Phthorimaea operculella
granulovirus|Rep: Putative uncharacterized protein
PhopGV050 - Phthorimaea operculella granulovirus
Length = 339
Score = 111 bits (268), Expect = 1e-23
Identities = 58/171 (33%), Positives = 99/171 (57%), Gaps = 1/171 (0%)
Frame = -1
Query: 769 SNDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLNWERTRR 590
++ FL+ FN T VKIL+ KR+ + + +++ I LP EEI N++ +L+WE TRR
Sbjct: 147 NSQFLIVFNKNTPMGVKILNTKRLLILMGLLNKNSQFHIYLPPEEIMNIHKELSWEMTRR 206
Query: 589 LMKGDVPSNCATVNRSSLKYIKQAQSLLGIPDYSQTVV-DFVKMFQKIIFPYQLVPNVII 413
M+ V + C +N +S +Y+ A LLGI + + V+ F +I ++LVP++ +
Sbjct: 207 RMRTRVANRCTVLNEASYRYVLSAIELLGIDANGKLALHTIVEKFTSLIHSFKLVPDIFV 266
Query: 412 KLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPINMPDFSPSNN 260
+LN K +RL+C+ DS+A+++ GIVP+N+P +P N+
Sbjct: 267 ELNRLH----------GEEKHVRLYCEYDSVAVTNAGIVPLNLPTVNPRND 307
>UniRef50_Q7T9W9 Cluster: ORF_46; n=5; Granulovirus|Rep: ORF_46 -
Adoxophyes orana granulovirus (AoGV)
Length = 349
Score = 111 bits (266), Expect = 2e-23
Identities = 60/166 (36%), Positives = 102/166 (61%), Gaps = 3/166 (1%)
Frame = -1
Query: 769 SNDFLLCFNLETSTMVKILSLKRIFCIFQ-YRKQPARYVINLPHEEIDNLYNKLNWERTR 593
+N F++ F+ +T VKIL+ KR F + YR P + I L ++E++ ++ +L+WE R
Sbjct: 155 NNKFIIHFDKDTPMGVKILNTKRYFILLSVYRSSPVKLCIYLTYDELNVVHKELSWESIR 214
Query: 592 RLMKGDVPSN-CATVNRSSLKYIKQAQSLLGIPDYS-QTVVDFVKMFQKIIFPYQLVPNV 419
R M+G + SN C +NRSS KY++ A +L I + ++ VKMF +I Y+LVP++
Sbjct: 215 RQMRGGLASNACNILNRSSYKYVQDAMEILQINTTNISSIHVLVKMFTPLILRYKLVPDI 274
Query: 418 IIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPINMP 281
+++N + + K +RL+CK++S+AI++ G VPIN+P
Sbjct: 275 FVEMNRIN----------GNEKHVRLYCKHESLAITNAGPVPINLP 310
>UniRef50_A5IZP8 Cluster: Putative uncharacterized protein orf46;
n=1; Spodoptera litura granulovirus|Rep: Putative
uncharacterized protein orf46 - Spodoptera litura
granulovirus
Length = 358
Score = 110 bits (264), Expect = 4e-23
Identities = 56/163 (34%), Positives = 95/163 (58%), Gaps = 1/163 (0%)
Frame = -1
Query: 766 NDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLNWERTRRL 587
+++++CF ET VKIL++KR + R + A++ I L +E+ + +LNWE TRRL
Sbjct: 168 DNYVICFKKETPMGVKILNVKRYMILLNQRSKKAKFAIYLNCDELHIIQKELNWENTRRL 227
Query: 586 MKGDVPSNCATVNRSSLKYIKQAQSLLGIPDYS-QTVVDFVKMFQKIIFPYQLVPNVIIK 410
++G S C NR S YI A +LGI + +V + + +F ++ +++VP+V I+
Sbjct: 228 LRGGKKSACKVYNRKSYNYIVDALEMLGIDNLDISSVHNLMDIFNPLVLTFKIVPDVFIQ 287
Query: 409 LNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPINMP 281
L NK S K +R++C+ S+AI++ G+VP N+P
Sbjct: 288 L-----------NKMHSEKHVRVYCEGQSVAITNAGMVPFNLP 319
>UniRef50_Q9DVY9 Cluster: PxORF43 peptide; n=2; Granulovirus|Rep:
PxORF43 peptide - Plutella xylostella granulovirus
Length = 414
Score = 103 bits (247), Expect = 5e-21
Identities = 54/168 (32%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
Frame = -1
Query: 766 NDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLNWERTRRL 587
++FL+CF +T +KIL++KR + R + A + I + ++E+ ++ +L+WE RR+
Sbjct: 224 DNFLICFRKDTPLGIKILNIKRYLILLSLRARRATFSIYMTYDELTIVHRELSWESVRRV 283
Query: 586 MKGDVPSNCATVNRSSLKYIKQAQSLLGIPDYS-QTVVDFVKMFQKIIFPYQLVPNVIIK 410
++ C ++R S Y+K A LL I + ++V + F ++ Y LVP+V I+
Sbjct: 284 LRDGKIGQCNVLDRKSYVYVKNALELLDIDNQDMKSVHMLLDAFTPLVMRYHLVPDVFIE 343
Query: 409 LNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPINMPDFSPS 266
LNN + + K +RL+CK ++AI++ G+VPIN+P +PS
Sbjct: 344 LNNI----------SGANKHVRLYCKYMALAITNRGLVPINLPTNNPS 381
>UniRef50_P41661 Cluster: Uncharacterized 11.8 kDa protein in
HE65-PK2 intergenic region; n=9;
Nucleopolyhedrovirus|Rep: Uncharacterized 11.8 kDa
protein in HE65-PK2 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 105
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -3
Query: 119 MKPTAADIISRVTGGRTGNNIVDIIQANNSPTEGDQLGQ 3
MKPTAADIISR TGGR GNNIVDIIQA+NSPTEGDQLGQ
Sbjct: 1 MKPTAADIISRATGGRAGNNIVDIIQAHNSPTEGDQLGQ 39
>UniRef50_O10347 Cluster: Uncharacterized 11.7 kDa protein; n=3;
Nucleopolyhedrovirus|Rep: Uncharacterized 11.7 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 108
Score = 50.0 bits (114), Expect = 6e-05
Identities = 20/36 (55%), Positives = 30/36 (83%)
Frame = -3
Query: 110 TAADIISRVTGGRTGNNIVDIIQANNSPTEGDQLGQ 3
T + ++SR+TGGR GN IV++I++N +PT+GDQL Q
Sbjct: 3 TPSHVVSRLTGGRAGNPIVEVIRSNATPTDGDQLEQ 38
>UniRef50_Q6JK90 Cluster: Putative uncharacterized protein; n=3;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Neodiprion sertifer NPV
Length = 357
Score = 39.9 bits (89), Expect = 0.069
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 5/212 (2%)
Frame = -1
Query: 760 FLLCFNLETSTMVKI-LSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLNWERTRRLM 584
F +CF + KI L++KR+ I R + Y++NL + +L L +E+ RR++
Sbjct: 160 FNVCFRKRPIDLYKIVLNVKRLLIILS-RYGYSSYILNLNDKNTQDLIKTLKYEQLRRML 218
Query: 583 K----GDVPSNCATVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNVI 416
K G + + T + S I Q+Q D ++ K + +I Y ++P
Sbjct: 219 KFQQIGGLCGSLQTDKQLSQMKIIQSQLHSHYAD-MDNIMKTKKYYLILISQYHIIPEY- 276
Query: 415 IKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPINMPDFSPSNNAFDYSDYV 236
+ I +V K Y I + C N I+S G+VP N+ + N + ++
Sbjct: 277 -----YKLITTVNEGK---YCGISVHCNN--FTITSVGVVPPNIDIRTIKTNT---NKFI 323
Query: 235 NRTNINFVTQRVLIDGGFSSGVTVTPIKYNYY 140
+ + N Q + G +++ + + YY
Sbjct: 324 SEHDSNKYVQDLYKHGIYTTNLNIKAKTNQYY 355
>UniRef50_A3HA67 Cluster: Putative uncharacterized protein
precursor; n=1; Caldivirga maquilingensis IC-167|Rep:
Putative uncharacterized protein precursor - Caldivirga
maquilingensis IC-167
Length = 664
Score = 39.1 bits (87), Expect = 0.12
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -1
Query: 589 LMKGDVPSNCATVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFP 440
L+KG PSN +S YI LLG+ Y++TV+DF K F P
Sbjct: 311 LLKGLYPSNADVSTPASFGYIALGSVLLGLETYNETVLDFAKGFINFWLP 360
>UniRef50_A4AGL0 Cluster: Ribonuclease G; n=2; Actinobacteria
(class)|Rep: Ribonuclease G - marine actinobacterium
PHSC20C1
Length = 944
Score = 35.9 bits (79), Expect = 1.1
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Frame = -1
Query: 670 PARYVINLPHEEIDNLYNKL-NWERTR--RLMKGDVPSNCATVNRSSLKYIKQAQSLLGI 500
P RY++ +P+ + + KL + ER+R +++KG +P N + R++ + + Q L +
Sbjct: 409 PGRYLVYVPNGSMSGISRKLPDTERSRLKKILKGVLPENVGVIVRTAAEGATEEQLTLDV 468
Query: 499 PDYSQTVVDFVKMFQKIIFPYQL--VPNVIIKL 407
+ D K+ P L P+++IK+
Sbjct: 469 SRLTNQWADISAQVDKVQAPALLHSEPDLLIKI 501
>UniRef50_Q126X5 Cluster: Signal transduction histidine kinase; n=1;
Polaromonas sp. JS666|Rep: Signal transduction histidine
kinase - Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 439
Score = 34.7 bits (76), Expect = 2.6
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = -1
Query: 532 YIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQ-IMSVAPNKAESY 356
YI+ ++L+ + + + +K+ YQ + L ++ Q ++S+ +
Sbjct: 263 YIRDPRTLMQFQESQGRIRSMALIHEKL---YQSETLATVDLADYVQTLVSILMRTYTAN 319
Query: 355 KKIRLFCKNDSIAISSNGIVPINMPDFSPSNNAFDYSDYVNRTNINFVTQRVLIDGGFSS 176
K++L C+ D ++ + VP+ + NA Y+ +R VT + DGGF
Sbjct: 320 AKVKLECRLDPATVNIDTAVPVGLMLNELVTNALKYAFPNSRPGRLLVTLDAVADGGFVL 379
Query: 175 GV 170
GV
Sbjct: 380 GV 381
>UniRef50_A4BXH2 Cluster: Leucyl-tRNA synthetase; n=2; Bacteria|Rep:
Leucyl-tRNA synthetase - Polaribacter irgensii 23-P
Length = 1117
Score = 34.7 bits (76), Expect = 2.6
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 4/145 (2%)
Frame = -1
Query: 577 DVPSNCATVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVP--NVIIKLN 404
D + A ++ SL+Y K+ +G +++ + + + +QK +F +VP KL
Sbjct: 705 DATNTGAFASKESLEYWKEVDLYIGGSEHATGHLLYARFWQKFLFDKGIVPVDEFAKKLI 764
Query: 403 NFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPINMPDFSPSNNAFDYSDYVNRTN 224
N I+ + A Y + F KN SN V +P S N F+ D
Sbjct: 765 NQGMILGTS---AFVY-RATAFVKNGCSTEKSNDDVLDKIPTVLVSKNLFNSDDEFEAVV 820
Query: 223 INFVTQRVLIDGGFSSGVTV--TPI 155
N++ + ++ F+ V + TPI
Sbjct: 821 KNYLLDKGFLNPNFADLVMLVKTPI 845
>UniRef50_A3H9B7 Cluster: Bacterio-opsin activator, HTH; n=1;
Caldivirga maquilingensis IC-167|Rep: Bacterio-opsin
activator, HTH - Caldivirga maquilingensis IC-167
Length = 229
Score = 34.7 bits (76), Expect = 2.6
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 661 YVINLPHEEIDNLYNKL-NWERTRRLMKGDVPSNCATVNRSSLKYIKQAQSLLGIPDY 491
Y+IN E+I +LY KL N+ + +P N NRS+L Y+ + + + Y
Sbjct: 120 YLINDHEEKISSLYEKLNNYGELLNFITNKIPGNIPLFNRSTLPYLTNTEGKILVYAY 177
>UniRef50_Q8IHR6 Cluster: Coat protein, gamma subunit, putative; n=6;
Plasmodium|Rep: Coat protein, gamma subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1068
Score = 33.9 bits (74), Expect = 4.6
Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 8/162 (4%)
Frame = -1
Query: 661 YVINLPHEEIDNLYNKLNWERTRRLMKGD---VPSNCATVNRSSLKYIKQAQSLLGIPDY 491
Y++ +E+D +++ E +L + +N N + + + + I
Sbjct: 647 YMLKEKIKELDTSNKQISNEYEEKLQNNENINEHNNIHYSNNNLIDQLLEYDQNTNIDQL 706
Query: 490 SQTVVDFVKMFQKIIFPYQLVPNVIIK---LNNFDQIMSVAPNKAE--SYKKIRLFCKND 326
+ + ++ K F YQ V II LNN D + S NK SY +I +
Sbjct: 707 LYFISNHIEKDPKEEFSYQHVKEQIIASNDLNNKDYVSSPFINKKNKTSYNEIPNLTNTN 766
Query: 325 SIAISSNGIVPINMPDFSPSNNAFDYSDYVNRTNINFVTQRV 200
SI+ + N + + PD NN Y D N +NIN + + +
Sbjct: 767 SIS-NINKYIDLT-PDTLYINNMSKYIDMYNLSNINIINKSI 806
>UniRef50_Q22DI5 Cluster: Longevity-assurance protein; n=1;
Tetrahymena thermophila SB210|Rep: Longevity-assurance
protein - Tetrahymena thermophila SB210
Length = 433
Score = 33.9 bits (74), Expect = 4.6
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = -1
Query: 718 ILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLNWE-RTRRLMKGDVPSNCATVNRS 542
ILS+ +F +F Y+K + + ++ Y E R +++K S + +
Sbjct: 89 ILSILVVFLLFGYKKTLRVCLKDWVIRNLNEKYVGAQKEVRANKILKWIQDSTYYSCTTA 148
Query: 541 SLKYIKQAQSLLGIPDYSQT-VVDFVKMFQKIIFPYQLVPNVIIKL 407
KYIKQ+ + L QT VV F K +Q I F Q+ N I +
Sbjct: 149 LHKYIKQSHNNLSPSQQGQTIVVKFEKEYQLINFSNQIFANKQINI 194
>UniRef50_A0EBL3 Cluster: Chromosome undetermined scaffold_88, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_88,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 341
Score = 33.9 bits (74), Expect = 4.6
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -1
Query: 541 SLKYIKQAQ-SLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKA 365
S K IK + SL +YS ++D KM + LVPN+ I L N+ Q +
Sbjct: 128 SFKEIKSYKTSLFRKSNYSNLMIDSFKMVNLVNMALSLVPNLKIALKNYPQDRLLQKLTF 187
Query: 364 ESYKKIRLFCKN 329
Y++I+ + KN
Sbjct: 188 NIYQEIQGYQKN 199
>UniRef50_Q9YW59 Cluster: Putative uncharacterized protein MSV032;
n=1; Melanoplus sanguinipes entomopoxvirus|Rep: Putative
uncharacterized protein MSV032 - Melanoplus sanguinipes
entomopoxvirus (MsEPV)
Length = 252
Score = 33.5 bits (73), Expect = 6.0
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = -1
Query: 580 GDVPSNCATVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNVIIKLNN 401
GD N N+ ++ +++ + PD +++V +FV +K I + + P+V K NN
Sbjct: 73 GDATFNFLRANK--IETLEEPSHIKITPDNNESVQEFVDE-EKKINSFTIGPDVTEKFNN 129
Query: 400 FDQIMSVAPNKAESYKKIRLFCKNDSIAI 314
+ + PN + LF +ND+ I
Sbjct: 130 ISILENNLPNDGFKFSNNVLFYQNDTTDI 158
>UniRef50_Q89J50 Cluster: Blr5434 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr5434 protein - Bradyrhizobium
japonicum
Length = 410
Score = 33.5 bits (73), Expect = 6.0
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = -1
Query: 469 VKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPI 290
+K++ +I P + + + + FD ++S E F IA+S +G++ I
Sbjct: 141 IKVYADMISP-AMCHDAVAQAGKFDLVVS--RQVLEHIVDFENFFDCVKIALSDDGLLFI 197
Query: 289 NMPDFSPSNNAFDYSDYVNRTNINFVTQRVLIDGGFSSGVTVTPI-KYNY 143
++PDF+P + A D S + ++++ T+ L+ G + KYN+
Sbjct: 198 DVPDFAPGSTAGDLS-VLWEEHVSYFTEPTLVALLARHGFEAVSVKKYNF 246
>UniRef50_Q1D9P1 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 669
Score = 33.5 bits (73), Expect = 6.0
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 670 PARYVINLPHEEIDNLYNKLNWERTRRLMKG 578
PARY +++ H +I+N +NKLN + + L G
Sbjct: 605 PARYTVDVVHAQINNTFNKLNSQLNKGLTGG 635
>UniRef50_UPI000049833D Cluster: hypothetical protein 55.t00029;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 55.t00029 - Entamoeba histolytica HM-1:IMSS
Length = 505
Score = 33.1 bits (72), Expect = 8.0
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = -1
Query: 502 IPDYSQTVVDFVKMFQKIIFPYQLVPNVIIKLN-NFDQIMSVAPNKAESYKKIRLFCKND 326
IPD + V M +K F YQ +++ ++N N +QI+ + + Y + +FC +
Sbjct: 412 IPDDEIVALQLVSMREKCDFAYQFAMDMLKRMNKNNNQILQILIAIGD-YAEALIFCISH 470
Query: 325 SIAISSNGIVPINMPDFSPSNNAFDYSDYVNRTNIN 218
+ +S++ I + +P F + Y+ N N
Sbjct: 471 KVQLSNHDITSLLSQVKNPV-LLFQLNQYLQNKNTN 505
>UniRef50_Q7YYX8 Cluster: Putative uncharacterized protein; n=3;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum
Length = 1316
Score = 33.1 bits (72), Expect = 8.0
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Frame = -1
Query: 424 NVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGI------VPINMPDFSPSN 263
N + K NNFD I ++ SY ++ + S + SSN I +PI+M N
Sbjct: 640 NSLHKENNFDIINTIVQKDTISYDEVNSILVSPSKSFSSNSIFIPESNLPISMFHVIQKN 699
Query: 262 NAFDYSDYVNRTNINFVTQR 203
NA NFV+++
Sbjct: 700 NASSKPQESKENKFNFVSEK 719
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 776,602,375
Number of Sequences: 1657284
Number of extensions: 15911104
Number of successful extensions: 44178
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 42501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44155
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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