Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12d19
(778 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 23 3.2
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 4.2
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 5.5
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 22 5.5
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 5.5
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 5.5
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 5.5
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 7.3
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 22 7.3
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 9.7
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 9.7
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 23.0 bits (47), Expect = 3.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -1
Query: 451 IIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFC 335
+IF Y L VII+ N ++I+ + A S K IR +C
Sbjct: 6 VIFVYILSVAVIIRANGINEILKI---MAVSMKDIR-YC 40
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.6 bits (46), Expect = 4.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 634 IDNLYNKLNWERTRRLMKGD 575
+DNL +L ER +L +GD
Sbjct: 626 VDNLLGELGGERLLKLAQGD 645
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 565 NCATVNRSSLKYIKQAQSLLGIP 497
NC T +SL+ KQ + +G P
Sbjct: 240 NCWTQTENSLEKAKQVGAFMGCP 262
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 22.2 bits (45), Expect = 5.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 565 NCATVNRSSLKYIKQAQSLLGIP 497
NC T +SL+ KQ + +G P
Sbjct: 111 NCWTQTENSLEKAKQVGAFMGCP 133
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/40 (25%), Positives = 15/40 (37%)
Frame = -2
Query: 120 YETDGGRHYIKSDGRSHRQQYRRYHPSQQLAD*RRSTWPI 1
Y T G H+ G SH +H S + + P+
Sbjct: 409 YSTPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQHSTPL 448
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.2 bits (45), Expect = 5.5
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = -1
Query: 628 NLYNKLNWERTRRLMKGDVPSNCATVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKI 449
N+ KL+ R +G+ +N N+ S + + A P Y Q K+ QK
Sbjct: 77 NITIKLD-TRAEDSTRGEQEANLGYTNKMSTRGKRPAS-----PGYVQPPTKHQKLDQKF 130
Query: 448 IFPYQ 434
IFP +
Sbjct: 131 IFPQE 135
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 565 NCATVNRSSLKYIKQAQSLLGIP 497
NC T +SL+ KQ + +G P
Sbjct: 240 NCWTQTENSLEKAKQVGAFMGCP 262
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 545 AVYCSAIGWHVALHKPARSLPIQFVVQIINFLVRQI 652
+ YC V + P R L IQ QI+ F + I
Sbjct: 269 STYCEP---QVVIVSPTRELTIQIWQQIVKFSLNSI 301
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +2
Query: 587 KPARSLPIQFVVQIINFLVRQIDYIARGLFAI 682
KP + +P+Q + N +++ I+++ + L AI
Sbjct: 54 KPGKLVPLQCDLSNQNDILKVIEWVEKNLGAI 85
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.4 bits (43), Expect = 9.7
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +2
Query: 353 FVGLCFIWRNRHYLVKVVQFYDYVGHQLIGENYFLEHFDKVHNRLAIVGNAEQ 511
FV FIW L+ ++ FY + + L K N ++V N ++
Sbjct: 220 FVTCIFIWAYVIPLIFIILFYSRLLSSIRNHEKMLREQAKKMNVKSLVSNQDK 272
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 9.7
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +2
Query: 353 FVGLCFIWRNRHYLVKVVQFYDYVGHQLIGENYFLEHFDKVHNRLAIVGNAEQ 511
FV FIW L+ ++ FY + + L K N ++V N ++
Sbjct: 220 FVTCIFIWAYVIPLIFIILFYSRLLSSIRNHEKMLREQAKKMNVKSLVSNQDK 272
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,860
Number of Sequences: 438
Number of extensions: 4873
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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