Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12d16
(845 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41426 Cluster: Uncharacterized 36.6 kDa protein in EGT... 169 8e-41
UniRef50_Q91GN2 Cluster: ARIF-1; n=1; Epiphyas postvittana NPV|R... 64 6e-09
UniRef50_Q2NP66 Cluster: Actin rearrangement inducing factor 1; ... 64 6e-09
UniRef50_P41425 Cluster: Uncharacterized 8.0 kDa protein in EGT-... 48 9e-09
UniRef50_Q1HGX2 Cluster: Arif-1; n=1; Antheraea pernyi nucleopol... 62 1e-08
UniRef50_O10280 Cluster: Uncharacterized 34.7 kDa protein; n=1; ... 50 7e-05
UniRef50_Q840G5 Cluster: Sic; n=6; Streptococcus pyogenes|Rep: S... 37 0.73
UniRef50_Q0RRC5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.73
UniRef50_Q3SSB1 Cluster: Putative uncharacterized protein precur... 35 2.2
UniRef50_UPI00015B40B8 Cluster: PREDICTED: hypothetical protein;... 35 3.0
UniRef50_A7H8T8 Cluster: Putative uncharacterized protein precur... 35 3.0
UniRef50_Q6MNN6 Cluster: Hypothetical membrane spanning protein ... 34 3.9
UniRef50_A2TW02 Cluster: Putative uncharacterized protein; n=1; ... 34 5.2
UniRef50_Q4X2H0 Cluster: Putative uncharacterized protein; n=6; ... 34 5.2
UniRef50_Q6IGP5 Cluster: HDC05737; n=1; Drosophila melanogaster|... 33 6.8
UniRef50_UPI00015B4FCB Cluster: PREDICTED: hypothetical protein;... 33 9.0
UniRef50_Q5M8V9 Cluster: WNT1 inducible signaling pathway protei... 33 9.0
UniRef50_A0LA73 Cluster: Putative uncharacterized protein precur... 33 9.0
>UniRef50_P41426 Cluster: Uncharacterized 36.6 kDa protein in
EGT-IAP1 intergenic region; n=6;
Nucleopolyhedrovirus|Rep: Uncharacterized 36.6 kDa
protein in EGT-IAP1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 319
Score = 169 bits (411), Expect = 8e-41
Identities = 92/134 (68%), Positives = 96/134 (71%)
Frame = -1
Query: 845 PTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDIDYCL 666
PTVFNQNY VIIMGVLTILAVQCWNLYVQLKEMR NIY+KRRAEAEKASY+HYCDIDY
Sbjct: 189 PTVFNQNYPVIIMGVLTILAVQCWNLYVQLKEMRHNIYMKRRAEAEKASYEHYCDIDY-R 247
Query: 665 EEERESNSKLLEVVSEGRNSSSVAAVXXXXXXXXXXXXXXXXXXXXSFIALSDLTXXXXX 486
EERESNS+LLEVVSEGRNSSSV AV SFIA SDL+
Sbjct: 248 REERESNSRLLEVVSEGRNSSSVVAV--THPPSTTSTTTSVSETLSSFIAPSDLSSQPSP 305
Query: 485 XXXXXXPFGNHNEF 444
PFGNHNEF
Sbjct: 306 SSHPSSPFGNHNEF 319
>UniRef50_Q91GN2 Cluster: ARIF-1; n=1; Epiphyas postvittana NPV|Rep:
ARIF-1 - Epiphyas postvittana nucleopolyhedrovirus
(EppoMNPV)
Length = 307
Score = 63.7 bits (148), Expect = 6e-09
Identities = 38/85 (44%), Positives = 49/85 (57%)
Frame = -1
Query: 845 PTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDIDYCL 666
PTVFNQN S +IM LTI+ + CWN+YVQ KEMR K E Y
Sbjct: 188 PTVFNQNPSALIMMTLTIIIIFCWNMYVQQKEMR----TKPEPAVESNEEGGY------T 237
Query: 665 EEERESNSKLLEVVSEGRNSSSVAA 591
+E ES +LLEV++EGR+S++ A
Sbjct: 238 TDEEESQLRLLEVMTEGRSSTTGTA 262
>UniRef50_Q2NP66 Cluster: Actin rearrangement inducing factor 1;
n=4; Nucleopolyhedrovirus|Rep: Actin rearrangement
inducing factor 1 - Hyphantria cunea nuclear
polyhedrosis virus (HcNPV)
Length = 365
Score = 63.7 bits (148), Expect = 6e-09
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = -1
Query: 845 PTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDIDYCL 666
PT+FNQN ++M + ++ + CWN+Y+ KEMR+ I + E+ + YD D D
Sbjct: 192 PTIFNQNQVALMMIAILLIVLHCWNMYILRKEMRKRPVI-QSGESAELKYD---DTDKEE 247
Query: 665 EEERESNSKLLEVVSEGR 612
EE+ +SN ++LE++SE R
Sbjct: 248 EEQFQSNKRMLEIISEDR 265
>UniRef50_P41425 Cluster: Uncharacterized 8.0 kDa protein in
EGT-IAP1 intergenic region; n=1; Autographa californica
nucleopolyhedrovirus|Rep: Uncharacterized 8.0 kDa
protein in EGT-IAP1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 69
Score = 48.4 bits (110), Expect(2) = 9e-09
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = -1
Query: 338 DEEIISRRTPTFSPKLLRKSKELS 267
DEEIISRRTPTFSPKL RKS+ELS
Sbjct: 7 DEEIISRRTPTFSPKLFRKSRELS 30
Score = 34.7 bits (76), Expect(2) = 9e-09
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = -1
Query: 149 MCFSEELQRKFKERKL 102
MCFSEELQRKF+E+KL
Sbjct: 48 MCFSEELQRKFQEKKL 63
>UniRef50_Q1HGX2 Cluster: Arif-1; n=1; Antheraea pernyi
nucleopolyhedrovirus|Rep: Arif-1 - Antheraea pernyi
nuclear polyhedrosis virus (ApNPV)
Length = 324
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/82 (42%), Positives = 50/82 (60%)
Frame = -1
Query: 845 PTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDIDYCL 666
PTVF +N + + V I +QCWN YV+ K+MR + + +A+ S D Y D
Sbjct: 187 PTVFTENQWTVTVAVFMIFVIQCWNAYVRHKDMR----FQPKQDAQ--SVDGYDTADE-- 238
Query: 665 EEERESNSKLLEVVSEGRNSSS 600
EEER+S +LLE+VSEGR S++
Sbjct: 239 EEERQSKLRLLEIVSEGRQSAT 260
>UniRef50_O10280 Cluster: Uncharacterized 34.7 kDa protein; n=1;
Orgyia pseudotsugata MNPV|Rep: Uncharacterized 34.7 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 298
Score = 50.0 bits (114), Expect = 7e-05
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = -1
Query: 845 PTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDIDYCL 666
PTVFNQN + M L + + CWN+YVQ KE RR + R + + D
Sbjct: 183 PTVFNQNQGALTMLALLAIVMHCWNMYVQQKETRRKPN-RARNITNTLLMETEKEYDTAE 241
Query: 665 EEERESNSK 639
EEE ESN +
Sbjct: 242 EEEHESNMR 250
>UniRef50_Q840G5 Cluster: Sic; n=6; Streptococcus pyogenes|Rep: Sic
- Streptococcus pyogenes
Length = 310
Score = 36.7 bits (81), Expect = 0.73
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 129 QLFAKTHGRWSGNGWSGNVCSGNGWSGRFYGCSGNGWS 242
+++ + WSG+GWSG+ SG+ WSG + SG+G S
Sbjct: 33 EMYTSRNFGWSGDGWSGDDWSGDDWSGDDW--SGDGLS 68
Score = 33.9 bits (74), Expect = 5.2
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 120 FTLQLFAKTHGRWSGNGWSGNVCSGNGWSG---RFYGCSGNGWS 242
+T + F + WSG+ WSG+ SG+ WSG Y SG G S
Sbjct: 35 YTSRNFGWSGDGWSGDDWSGDDWSGDDWSGDGLSKYDRSGGGLS 78
>UniRef50_Q0RRC5 Cluster: Putative uncharacterized protein; n=1;
Frankia alni ACN14a|Rep: Putative uncharacterized
protein - Frankia alni (strain ACN14a)
Length = 660
Score = 36.7 bits (81), Expect = 0.73
Identities = 20/29 (68%), Positives = 20/29 (68%)
Frame = +3
Query: 159 SGNGWSGNVCSGNGWSGRFYGCSGNGWSG 245
SGNG SGN SGNG SG G SGNG SG
Sbjct: 409 SGNGSSGNGSSGNGSSGN--GSSGNGSSG 435
Score = 33.9 bits (74), Expect = 5.2
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = +3
Query: 150 GRWSGNGWSGNVCSGNGWSGRFYGCSGNGWSG 245
G S NG SGN SGNG SG G SGNG SG
Sbjct: 401 GGSSENGSSGNGSSGNGSSGN--GSSGNGSSG 430
>UniRef50_Q3SSB1 Cluster: Putative uncharacterized protein
precursor; n=1; Nitrobacter winogradskyi Nb-255|Rep:
Putative uncharacterized protein precursor - Nitrobacter
winogradskyi (strain Nb-255 / ATCC 25391)
Length = 211
Score = 35.1 bits (77), Expect = 2.2
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +3
Query: 156 WSGNGWSGNVC--SGNGWSGRFYGCSGNGW 239
W+G GW G+ +G GW G G G GW
Sbjct: 74 WAGRGWGGHRIGWAGRGWRGHRIGWGGRGW 103
Score = 33.9 bits (74), Expect = 5.2
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +3
Query: 150 GRWSGNGWSGNV---CSGNGWSGRFYGCSGNGWSG 245
GR G GW G +G GW G G +G GW G
Sbjct: 59 GRHFGGGWRGGGRMGWAGRGWGGHRIGWAGRGWRG 93
>UniRef50_UPI00015B40B8 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 135
Score = 34.7 bits (76), Expect = 3.0
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 162 GNGWSGNVCSGNGWSGRFYGCSGNGWSG 245
G+GWSG+ G+GWSG + +GWSG
Sbjct: 67 GHGWSGH---GHGWSGHGWPSYSHGWSG 91
>UniRef50_A7H8T8 Cluster: Putative uncharacterized protein
precursor; n=2; Anaeromyxobacter|Rep: Putative
uncharacterized protein precursor - Anaeromyxobacter sp.
Fw109-5
Length = 251
Score = 34.7 bits (76), Expect = 3.0
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = +3
Query: 150 GRWSGNGWSGNVCSGNGWSGRFYGCSGNGWSGRF 251
G W G G G G GWSG G SG G SGR+
Sbjct: 219 GGWGGGG-GGGFGGGGGWSGGGGGFSGGGASGRW 251
>UniRef50_Q6MNN6 Cluster: Hypothetical membrane spanning protein
precursor; n=1; Bdellovibrio bacteriovorus|Rep:
Hypothetical membrane spanning protein precursor -
Bdellovibrio bacteriovorus
Length = 251
Score = 34.3 bits (75), Expect = 3.9
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = +3
Query: 150 GRWSGNGWSGNVCSGNGWSGRFYGCSGNGWSG 245
G G GWS G GWSG G SG G SG
Sbjct: 218 GYGGGGGWSSGGGGGGGWSGGGGGFSGGGSSG 249
Score = 33.5 bits (73), Expect = 6.8
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 162 GNGWSGNVCSGNGWSGRFYGCSGNGWSG 245
G GW G G GWS G G GWSG
Sbjct: 212 GGGWGGGYGGGGGWSSG--GGGGGGWSG 237
>UniRef50_A2TW02 Cluster: Putative uncharacterized protein; n=1;
Dokdonia donghaensis MED134|Rep: Putative
uncharacterized protein - Dokdonia donghaensis MED134
Length = 374
Score = 33.9 bits (74), Expect = 5.2
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +3
Query: 153 RWSGNGWSGNVCSGNGWSGRFYGCSGNGWS 242
RW G GW+G G GW GR +G GN WS
Sbjct: 137 RWGGLGWNG----GLGW-GRGFGWGGNFWS 161
>UniRef50_Q4X2H0 Cluster: Putative uncharacterized protein; n=6;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 1666
Score = 33.9 bits (74), Expect = 5.2
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 605 CYFCLRKPLPAI*SYFLVLLRGNSQCRNNDHKMLFRLRRAFLC 733
CYFC++ LP + S++L + C+N + K + + A LC
Sbjct: 853 CYFCIKYNLPILNSFYLFNILHTMDCKNKEMKKMGQDHIAELC 895
>UniRef50_Q6IGP5 Cluster: HDC05737; n=1; Drosophila
melanogaster|Rep: HDC05737 - Drosophila melanogaster
(Fruit fly)
Length = 104
Score = 33.5 bits (73), Expect = 6.8
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 153 RWSGNGWSG--NVCSGNGWSGRFYGCSGNGWS 242
RW GW G N G GWSG + G GW+
Sbjct: 54 RWLSGGWGGGWNTGWGGGWSGSWNGGWNGGWN 85
>UniRef50_UPI00015B4FCB Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 109
Score = 33.1 bits (72), Expect = 9.0
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +3
Query: 147 HGRWSG----NGWSGNVCSGNGWSGRFYGCSGNGWSGRF 251
+G W G +GW G G GW G +Y G GW GR+
Sbjct: 69 YGGWGGRPYYHGWGGR---GYGWGGGYY---GGGWGGRY 101
>UniRef50_Q5M8V9 Cluster: WNT1 inducible signaling pathway protein
2; n=3; Xenopus|Rep: WNT1 inducible signaling pathway
protein 2 - Xenopus tropicalis (Western clawed frog)
(Silurana tropicalis)
Length = 312
Score = 33.1 bits (72), Expect = 9.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 418 PSRCTTCPRKFCVPHRTRAQCASLRCR 338
P+ C TCP K C P++T + CR
Sbjct: 269 PTFCGTCPMKHCAPYQTENDLVAFHCR 295
>UniRef50_A0LA73 Cluster: Putative uncharacterized protein
precursor; n=1; Magnetococcus sp. MC-1|Rep: Putative
uncharacterized protein precursor - Magnetococcus sp.
(strain MC-1)
Length = 188
Score = 33.1 bits (72), Expect = 9.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 156 WSGNGWSGNVCSGNGWSGRFYGCSGNGWSGRFY 254
W+ NGW G NGW G YG + G+ G Y
Sbjct: 53 WN-NGWGGGAPWNNGWGGPGYGYAPYGYPGYAY 84
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,395,558
Number of Sequences: 1657284
Number of extensions: 10110512
Number of successful extensions: 34897
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 31310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34615
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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