Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc12d09
         (810 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.2  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   1.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   5.0  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.8  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   8.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   8.8  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   8.8  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   8.8  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 740 DISSNFYYLKQISAAP 787
           +IS NFYYL  +S  P
Sbjct: 60  EISENFYYLPAMSTGP 75


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 221 EELSYQILTAVLFSFLFLDSQI 156
           E+LSY ILT+ L +F F+  Q+
Sbjct: 283 EKLSYIILTSFLNNFYFIIFQV 304


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 514 GFIAESGPDERVHLCHVSTQPKQPTSRCC 600
           G I E    +RVH   V++   +P +R C
Sbjct: 223 GRIVERFTSDRVHAALVTSPRARPLARTC 251


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 282 VQYSMMHC*SVFVANFYNLCRGTVISNFD 196
           ++  +M   ++ V  F  L RGT+I +FD
Sbjct: 93  IECFVMMALTLIVTLFTFLARGTLIKSFD 121


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 282 VQYSMMHC*SVFVANFYNLCRGTVISNFD 196
           ++  +M   ++ V  F  L RGT+I +FD
Sbjct: 93  IECFVMMALTLIVTLFTFLARGTLIKSFD 121


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = -2

Query: 743 YLNNISKWATPLSRSSFSPSFGVWLVLFAPSSHLKDQTE 627
           ++N+I K A  +++S  SP++ +     + +S  + +TE
Sbjct: 397 FINDIVKTAKLMAKSMKSPTYALKFEYRSMNSWFEHETE 435


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = -2

Query: 743 YLNNISKWATPLSRSSFSPSFGVWLVLFAPSSHLKDQTE 627
           ++N+I K A  +++S  SP++ +     + +S  + +TE
Sbjct: 397 FINDIVKTAKLMAKSMKSPTYALKFEYRSMNSWFEHETE 435


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = -2

Query: 743 YLNNISKWATPLSRSSFSPSFGVWLVLFAPSSHLKDQTE 627
           ++N+I K A  +++S  SP++ +     + +S  + +TE
Sbjct: 397 FINDIVKTAKLMAKSMKSPTYALKFEYRSGNSWFEHETE 435


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = -2

Query: 743 YLNNISKWATPLSRSSFSPSFGVWLVLFAPSSHLKDQTE 627
           ++N+I K A  +++S  SP++ +     + +S  + +TE
Sbjct: 397 FINDIVKTAKLMAKSMKSPTYALKFEYRSGNSWFEHETE 435


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,154
Number of Sequences: 336
Number of extensions: 4318
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)