Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12d07
(860 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4WCV0 Cluster: Eukaryotic translation initiation facto... 179 1e-43
UniRef50_P47813 Cluster: Eukaryotic translation initiation facto... 177 2e-43
UniRef50_A7QB05 Cluster: Chromosome chr5 scaffold_72, whole geno... 160 4e-38
UniRef50_Q9AW58 Cluster: Eukaryotic translation initiation facto... 136 7e-31
UniRef50_UPI0000498CC1 Cluster: translation initiation factor eI... 130 6e-29
UniRef50_A0EIP4 Cluster: Chromosome undetermined scaffold_99, wh... 112 1e-23
UniRef50_Q7RN51 Cluster: Eukaryotic translation initiation facto... 107 3e-22
UniRef50_UPI0000DD8698 Cluster: PREDICTED: similar to Eukaryotic... 89 1e-16
UniRef50_A2F1G9 Cluster: Eukaryotic initiation factor 1A family ... 89 2e-16
UniRef50_Q7R1J4 Cluster: GLP_38_12700_12218; n=1; Giardia lambli... 87 7e-16
UniRef50_Q3LWE9 Cluster: Translation elongation initiation facto... 85 2e-15
UniRef50_Q22Y66 Cluster: Eukaryotic initiation factor 1A family ... 83 1e-14
UniRef50_Q97W62 Cluster: Translation initiation factor 1A; n=5; ... 80 6e-14
UniRef50_Q8TXZ3 Cluster: Translation initiation factor 1A; n=4; ... 75 2e-12
UniRef50_Q9HN64 Cluster: Translation initiation factor 1A 1; n=8... 73 7e-12
UniRef50_Q5UZM2 Cluster: Translation initiation factor 1A; n=4; ... 73 9e-12
UniRef50_O29481 Cluster: Translation initiation factor 1A; n=4; ... 73 9e-12
UniRef50_Q0W7X8 Cluster: Translation initiation factor 1A; n=2; ... 72 2e-11
UniRef50_A3H791 Cluster: S1, IF1 type; n=1; Caldivirga maquiling... 72 2e-11
UniRef50_A3MTZ0 Cluster: S1, IF1 family protein; n=2; Pyrobaculu... 71 5e-11
UniRef50_Q4QF06 Cluster: Eukaryotic translation initiation facto... 70 7e-11
UniRef50_Q7RN52 Cluster: Putative uncharacterized protein PY0197... 70 9e-11
UniRef50_Q979F7 Cluster: Translation initiation factor 1A; n=6; ... 70 9e-11
UniRef50_Q2FSC8 Cluster: Translation initiation factor eIF-1A; n... 68 4e-10
UniRef50_Q8ZXV9 Cluster: Translation initiation factor 1A; n=3; ... 67 5e-10
UniRef50_Q8TSA3 Cluster: Translation initiation factor 1A 1; n=1... 67 5e-10
UniRef50_Q8SS25 Cluster: EUKARYOTIC TRANSLATION INITIATION FACTO... 66 8e-10
UniRef50_A7I5X8 Cluster: Translation initiation factor eIF-1A; n... 66 1e-09
UniRef50_A1RXA3 Cluster: Translation initiation factor eIF-1A; n... 66 1e-09
UniRef50_A3DNJ1 Cluster: S1, IF1 family protein; n=1; Staphyloth... 63 8e-09
UniRef50_A4QTW8 Cluster: Eukaryotic translation initiation facto... 63 1e-08
UniRef50_A2BML2 Cluster: Translation initiation factor 1A; n=1; ... 63 1e-08
UniRef50_P57676 Cluster: Translation initiation factor 1A; n=1; ... 61 4e-08
UniRef50_UPI00015BAF11 Cluster: translation initiation factor 1A... 60 9e-08
UniRef50_O59280 Cluster: Translation initiation factor 1A; n=7; ... 56 9e-07
UniRef50_A0RVP5 Cluster: Translation initiation factor 1; n=4; A... 56 2e-06
UniRef50_Q6LZM1 Cluster: Translation initiation factor 1A; n=6; ... 56 2e-06
UniRef50_Q00X19 Cluster: Vacuolar sorting protein VPS36; n=2; Os... 47 5e-04
UniRef50_Q9BSC1 Cluster: MGC11102 protein; n=20; Coelomata|Rep: ... 43 0.009
UniRef50_Q9DFP1 Cluster: Eukaryotic translation initiation facto... 41 0.046
UniRef50_Q1M2Y3 Cluster: Translation initiation factor eIF-1A-li... 40 0.061
UniRef50_Q1HQA3 Cluster: Translation initiation factor 1a; n=3; ... 40 0.061
UniRef50_Q74MM1 Cluster: NEQ130; n=1; Nanoarchaeum equitans|Rep:... 38 0.25
UniRef50_Q3ZJ80 Cluster: Translation initiation factor IF-1, chl... 37 0.57
UniRef50_A7S7U6 Cluster: Predicted protein; n=3; Eumetazoa|Rep: ... 36 1.7
UniRef50_Q7XJP1 Cluster: Putative translation initiation factor;... 35 2.3
UniRef50_Q7VCW0 Cluster: Type II restriction enzyme, methylase s... 35 3.0
UniRef50_A3ADF4 Cluster: Putative uncharacterized protein; n=3; ... 35 3.0
UniRef50_A0DSZ4 Cluster: Chromosome undetermined scaffold_62, wh... 35 3.0
UniRef50_Q6K1L7 Cluster: Obelix; n=5; Amniota|Rep: Obelix - Gall... 34 4.0
UniRef50_Q8IQ13 Cluster: CG31957-PA; n=3; Diptera|Rep: CG31957-P... 33 9.3
>UniRef50_Q4WCV0 Cluster: Eukaryotic translation initiation factor
eIF-1A subunit, putative; n=10; Fungi/Metazoa group|Rep:
Eukaryotic translation initiation factor eIF-1A subunit,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 177
Score = 179 bits (435), Expect = 1e-43
Identities = 81/107 (75%), Positives = 91/107 (85%)
Frame = -1
Query: 695 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQ 516
LVFKE+GQEYAQV KMLGNGRLEAMCFDG KRL HIRGKLRKKVWINQGDIIL+ LRDYQ
Sbjct: 54 LVFKEEGQEYAQVVKMLGNGRLEAMCFDGEKRLAHIRGKLRKKVWINQGDIILLSLRDYQ 113
Query: 515 DAKADVILKYTPDEARNLKTYGEFPETVRINETVVYSVDGLDEDIEF 375
D K DVI+KYT DEAR+LK YGE PE +INET Y +G ++++EF
Sbjct: 114 DEKGDVIMKYTADEARSLKAYGELPEHAKINETDTYGHEGFEDNVEF 160
>UniRef50_P47813 Cluster: Eukaryotic translation initiation factor
1A, X-chromosomal; n=129; Eukaryota|Rep: Eukaryotic
translation initiation factor 1A, X-chromosomal - Homo
sapiens (Human)
Length = 144
Score = 177 bits (432), Expect = 2e-43
Identities = 83/107 (77%), Positives = 91/107 (85%)
Frame = -1
Query: 695 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQ 516
LVFKEDGQEYAQV KMLGNGRLEAMCFDG+KRLCHIRGKLRKKVWIN DIIL+GLRDYQ
Sbjct: 26 LVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQ 85
Query: 515 DAKADVILKYTPDEARNLKTYGEFPETVRINETVVYSVDGLDEDIEF 375
D KADVILKY DEAR+LK YGE PE +INET + G D++I+F
Sbjct: 86 DNKADVILKYNADEARSLKAYGELPEHAKINETDTFG-PGDDDEIQF 131
>UniRef50_A7QB05 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 310
Score = 160 bits (389), Expect = 4e-38
Identities = 76/103 (73%), Positives = 81/103 (78%)
Frame = -1
Query: 695 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQ 516
LVFKEDGQEYAQV +MLGNGR EAMC DG KRLCHIRGK+ KKVWI GDIIL+ L DYQ
Sbjct: 26 LVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVSLHDYQ 85
Query: 515 DAKADVILKYTPDEARNLKTYGEFPETVRINETVVYSVDGLDE 387
D KADVILKY PDEAR LK YGE PE R+NE + GLDE
Sbjct: 86 DDKADVILKYMPDEARLLKAYGELPENTRLNEGI---AGGLDE 125
>UniRef50_Q9AW58 Cluster: Eukaryotic translation initiation factor
1A; n=1; Guillardia theta|Rep: Eukaryotic translation
initiation factor 1A - Guillardia theta (Cryptomonas
phi)
Length = 143
Score = 136 bits (329), Expect = 7e-31
Identities = 57/87 (65%), Positives = 72/87 (82%)
Frame = -1
Query: 695 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQ 516
L+FK++ QEY QV KMLGNGR + CFDGI+RLCHIRGK+RKKVWIN GDI+L+ LRD+Q
Sbjct: 25 LIFKDNCQEYGQVIKMLGNGRCDTYCFDGIRRLCHIRGKMRKKVWINTGDIVLVALRDFQ 84
Query: 515 DAKADVILKYTPDEARNLKTYGEFPET 435
+ K D+I KY+PDE+R L+ +GE P T
Sbjct: 85 NNKGDIIHKYSPDESRKLRAFGELPLT 111
>UniRef50_UPI0000498CC1 Cluster: translation initiation factor
eIF-1A; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
translation initiation factor eIF-1A - Entamoeba
histolytica HM-1:IMSS
Length = 171
Score = 130 bits (313), Expect = 6e-29
Identities = 57/86 (66%), Positives = 68/86 (79%)
Frame = -1
Query: 695 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQ 516
LVFKE+GQEY QVT+MLGNGRLEA CFDG R CHIRG++++KVWIN D+IL+ LR+Y+
Sbjct: 26 LVFKEEGQEYGQVTRMLGNGRLEAYCFDGKTRQCHIRGQMQRKVWINVNDVILVSLREYE 85
Query: 515 DAKADVILKYTPDEARNLKTYGEFPE 438
D KADVI KY DE LK Y E P+
Sbjct: 86 DGKADVIKKYNSDEIIQLKKYKEIPD 111
>UniRef50_A0EIP4 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_99, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 112 bits (269), Expect = 1e-23
Identities = 50/86 (58%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = -1
Query: 686 KEDGQEYAQVTKMLGNGRLEAMCF-DGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDA 510
KEDGQ+YAQV K+LGNGRL +C D +RL HIRGK+R+KVWI GDI+L+ LR++QD
Sbjct: 28 KEDGQDYAQVIKLLGNGRLICVCLGDSKQRLGHIRGKMRRKVWIQNGDIVLVALREFQDE 87
Query: 509 KADVILKYTPDEARNLKTYGEFPETV 432
K DV+ KY P+E + LK E PE +
Sbjct: 88 KCDVVYKYFPEEIKQLKNLKEIPENL 113
>UniRef50_Q7RN51 Cluster: Eukaryotic translation initiation factor
1a; n=1; Plasmodium yoelii yoelii|Rep: Eukaryotic
translation initiation factor 1a - Plasmodium yoelii
yoelii
Length = 124
Score = 107 bits (258), Expect = 3e-22
Identities = 48/71 (67%), Positives = 58/71 (81%)
Frame = -1
Query: 587 RGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINETVVY 408
RGK+RK+VWIN GDIIL+ LRDYQD+KADVI KYTPDEAR+LK +GE PET +INET ++
Sbjct: 9 RGKMRKRVWINSGDIILVSLRDYQDSKADVIAKYTPDEARSLKAHGELPETAKINETDIF 68
Query: 407 SVDGLDEDIEF 375
DG +EF
Sbjct: 69 DDDG-QHGVEF 78
>UniRef50_UPI0000DD8698 Cluster: PREDICTED: similar to Eukaryotic
translation initiation factor 1A (eIF-1A) (eIF-4C)
(Liver regeneration-related protein LRRG048); n=1; Homo
sapiens|Rep: PREDICTED: similar to Eukaryotic
translation initiation factor 1A (eIF-1A) (eIF-4C)
(Liver regeneration-related protein LRRG048) - Homo
sapiens
Length = 118
Score = 89.4 bits (212), Expect = 1e-16
Identities = 42/64 (65%), Positives = 49/64 (76%)
Frame = -1
Query: 566 VWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINETVVYSVDGLDE 387
VWIN DIIL+GLRDYQD KADVILKY DEAR+LK YGE PE +INET + G D+
Sbjct: 43 VWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFG-PGDDD 101
Query: 386 DIEF 375
+I+F
Sbjct: 102 EIQF 105
>UniRef50_A2F1G9 Cluster: Eukaryotic initiation factor 1A family
protein; n=1; Trichomonas vaginalis G3|Rep: Eukaryotic
initiation factor 1A family protein - Trichomonas
vaginalis G3
Length = 139
Score = 88.6 bits (210), Expect = 2e-16
Identities = 45/105 (42%), Positives = 62/105 (59%)
Frame = -1
Query: 695 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQ 516
L+ E+ Q Y QV + LG+ R E +C D R+C +RGK R +++INQGD +LI LR+ +
Sbjct: 24 LILAEEMQVYGQVARSLGDKRFECICNDHKVRICKVRGKFRGRLFINQGDYLLIALREEE 83
Query: 515 DAKADVILKYTPDEARNLKTYGEFPETVRINETVVYSVDGLDEDI 381
D KAD+I KYT DEA L GE E +T + G D +
Sbjct: 84 DDKADIIHKYTTDEAHELFKMGEVNERDFTTQTEESAQGGDDNGV 128
>UniRef50_Q7R1J4 Cluster: GLP_38_12700_12218; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_38_12700_12218 - Giardia lamblia
ATCC 50803
Length = 160
Score = 86.6 bits (205), Expect = 7e-16
Identities = 43/107 (40%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Frame = -1
Query: 695 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRK-KVWINQGDIILIGLRDY 519
LV+K + + Y TK+LG G C DGI+R CH+RG L+K +V ++ GD++L+ LR++
Sbjct: 25 LVYKGESEVYGVCTKVLGCGYYTIYCLDGIRRRCHLRGALKKRRVMMHAGDLVLVSLREF 84
Query: 518 Q-DAKADVILKYTPDEARNLKTYGEFP---ETVRINETVVYSVDGLD 390
+ AD++ KY PDE + LK YGE + + E V+ VD D
Sbjct: 85 STETDADIVHKYQPDEVKELKKYGEITVDLDEILDREVEVFRVDQKD 131
>UniRef50_Q3LWE9 Cluster: Translation elongation initiation factor
4C; n=1; Bigelowiella natans|Rep: Translation elongation
initiation factor 4C - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 124
Score = 85.0 bits (201), Expect = 2e-15
Identities = 38/74 (51%), Positives = 51/74 (68%)
Frame = -1
Query: 668 YAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILK 489
Y +V LG+ RL+ +C DG R+C IRGKLRK VWI +GDIIL+ LR+Y D K DV+ +
Sbjct: 37 YGKVIVSLGDCRLKVLCEDGKSRVCTIRGKLRKTVWIREGDIILVSLREYDDFKGDVLCR 96
Query: 488 YTPDEARNLKTYGE 447
YT D+ +L G+
Sbjct: 97 YTLDQINSLIASGD 110
>UniRef50_Q22Y66 Cluster: Eukaryotic initiation factor 1A family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Eukaryotic initiation factor 1A family protein -
Tetrahymena thermophila SB210
Length = 213
Score = 82.6 bits (195), Expect = 1e-14
Identities = 39/78 (50%), Positives = 51/78 (65%)
Frame = -1
Query: 695 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQ 516
L KE +YA + K LG C DG RL +RG+LR K+++N+GDI+L+GLRDYQ
Sbjct: 26 LPIKEFETDYAIIEKNLGQLHFAVACSDGKVRLGVLRGRLRYKIYVNEGDIVLVGLRDYQ 85
Query: 515 DAKADVILKYTPDEARNL 462
D K D+ILKY +E R L
Sbjct: 86 DDKCDIILKYHKEETRQL 103
>UniRef50_Q97W62 Cluster: Translation initiation factor 1A; n=5;
Sulfolobaceae|Rep: Translation initiation factor 1A -
Sulfolobus solfataricus
Length = 108
Score = 80.2 bits (189), Expect = 6e-14
Identities = 33/74 (44%), Positives = 49/74 (66%)
Frame = -1
Query: 683 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKA 504
E+GQ V KMLG L +C DG +RL I GK+RKK+W+ +GD++L+G+ D+Q +
Sbjct: 19 EEGQTICVVKKMLGGDHLIVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRC 78
Query: 503 DVILKYTPDEARNL 462
D++ KY DE + L
Sbjct: 79 DILYKYGNDEIKRL 92
>UniRef50_Q8TXZ3 Cluster: Translation initiation factor 1A; n=4;
Euryarchaeota|Rep: Translation initiation factor 1A -
Methanopyrus kandleri
Length = 111
Score = 75.4 bits (177), Expect = 2e-12
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = -1
Query: 683 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKA 504
++G+ + V KMLGN R++ C DG R+ I GK+RK+VWI +GD++L+ ++Q +A
Sbjct: 17 KEGEIFGVVEKMLGNDRVQVRCVDGKTRVARIPGKMRKRVWIREGDVVLVKPWEFQPERA 76
Query: 503 DVILKYTPDEARNLKTYGEFPETV 432
DV +YT + LK G+ E V
Sbjct: 77 DVTWRYTRVQVDWLKRKGKLDERV 100
>UniRef50_Q9HN64 Cluster: Translation initiation factor 1A 1; n=8;
Halobacteriaceae|Rep: Translation initiation factor 1A 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 95
Score = 73.3 bits (172), Expect = 7e-12
Identities = 32/78 (41%), Positives = 50/78 (64%)
Frame = -1
Query: 683 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKA 504
ED + +A+VT MLG R++ C DG +R I G+++K++WI + DI+L+ D+QD KA
Sbjct: 15 EDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPWDWQDDKA 74
Query: 503 DVILKYTPDEARNLKTYG 450
DV +Y +A L+ G
Sbjct: 75 DVTWRYEKSDADQLREEG 92
>UniRef50_Q5UZM2 Cluster: Translation initiation factor 1A; n=4;
Halobacteriaceae|Rep: Translation initiation factor 1A -
Haloarcula marismortui (Halobacterium marismortui)
Length = 95
Score = 72.9 bits (171), Expect = 9e-12
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = -1
Query: 683 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKA 504
E+ + +A V MLG R++ C DG++R I GK++K++WI + D++L+ D+QD KA
Sbjct: 14 EEDEVFAVVMDMLGANRVKVRCMDGVERTARIPGKMQKRIWIREDDVVLVEPWDWQDEKA 73
Query: 503 DVILKYTPDEARNLKTYGEFPE 438
D+ +Y +A L+ G E
Sbjct: 74 DITWRYEKQDADQLREEGHIQE 95
>UniRef50_O29481 Cluster: Translation initiation factor 1A; n=4;
Euryarchaeota|Rep: Translation initiation factor 1A -
Archaeoglobus fulgidus
Length = 97
Score = 72.9 bits (171), Expect = 9e-12
Identities = 29/79 (36%), Positives = 51/79 (64%)
Frame = -1
Query: 686 KEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAK 507
++ G+ + VT MLG G ++ C DG++RL I GK+RKK+WI +GD++++ +Q +
Sbjct: 15 RKKGELFGVVTSMLGAGHIKVRCEDGVERLARIPGKMRKKIWIREGDVVIVVPWSFQKDR 74
Query: 506 ADVILKYTPDEARNLKTYG 450
AD++ +YT + L+ G
Sbjct: 75 ADIVWRYTNPQVEWLERKG 93
>UniRef50_Q0W7X8 Cluster: Translation initiation factor 1A; n=2;
Euryarchaeota|Rep: Translation initiation factor 1A -
Uncultured methanogenic archaeon RC-I
Length = 96
Score = 71.7 bits (168), Expect = 2e-11
Identities = 28/79 (35%), Positives = 48/79 (60%)
Frame = -1
Query: 686 KEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAK 507
+ +G+ V +LG R+ C D + R+C IRGK++K+ W+ +GDI+++ D+Q+ K
Sbjct: 13 RREGELLGTVINLLGGSRVLVRCMDSVTRMCRIRGKMKKRTWVREGDIVIVVPWDFQNDK 72
Query: 506 ADVILKYTPDEARNLKTYG 450
D+I +YT +A L G
Sbjct: 73 GDIIWRYTGPQAEWLSRKG 91
>UniRef50_A3H791 Cluster: S1, IF1 type; n=1; Caldivirga
maquilingensis IC-167|Rep: S1, IF1 type - Caldivirga
maquilingensis IC-167
Length = 102
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/89 (34%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = -1
Query: 683 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKA 504
++G+ A+VT ++G+ R++ +C DG R+ I GK RK++WI GD +++ D++ +KA
Sbjct: 11 DEGEMLAKVTDIVGDDRVKVVCEDGNVRIARIPGKYRKRMWIRIGDYLIVAPWDFEPSKA 70
Query: 503 DVILKYTPDEARNLKTYGEFPETV-RINE 420
DV+ KY E L+ ++ E + R++E
Sbjct: 71 DVVYKYEKGEVNELRRISKYSEVLNRLDE 99
>UniRef50_A3MTZ0 Cluster: S1, IF1 family protein; n=2;
Pyrobaculum|Rep: S1, IF1 family protein - Pyrobaculum
calidifontis (strain JCM 11548 / VA1)
Length = 99
Score = 70.5 bits (165), Expect = 5e-11
Identities = 30/83 (36%), Positives = 50/83 (60%)
Frame = -1
Query: 680 DGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKAD 501
+G+ +V +MLG+GR +C DG R+ + G+LRKK+W+ GD +++ L D++ K D
Sbjct: 11 EGEVLGKVLEMLGDGRFRVICADGEIRVARLPGRLRKKLWLKAGDYVIVALWDFEKDKGD 70
Query: 500 VILKYTPDEARNLKTYGEFPETV 432
++ KY + LK G F E +
Sbjct: 71 IVHKYDKRDVEELKRRG-FAEAI 92
>UniRef50_Q4QF06 Cluster: Eukaryotic translation initiation factor
1A, putative; n=7; Trypanosomatidae|Rep: Eukaryotic
translation initiation factor 1A, putative - Leishmania
major
Length = 168
Score = 70.1 bits (164), Expect = 7e-11
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = -1
Query: 683 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDY-QDAK 507
++G+EYAQV K LGN RLE G + IRG + +KVWI QGD++L+ R++ ++
Sbjct: 34 DEGEEYAQVKKALGNLRLELQLAGGSTVIGAIRGAMVRKVWIGQGDVVLVAKREFNENDV 93
Query: 506 ADVILKYTPDEARNLKTYGEFPETVRINE 420
D+I ++TP E R L P R E
Sbjct: 94 VDIIHRFTPAEVRLLVKENAIPRDFRSAE 122
>UniRef50_Q7RN52 Cluster: Putative uncharacterized protein PY01972;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY01972 - Plasmodium yoelii
yoelii
Length = 133
Score = 69.7 bits (163), Expect = 9e-11
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = -1
Query: 695 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIR 585
L++KE+ QEYAQV +MLGNGRLEA CFDG+KRLCHIR
Sbjct: 95 LLYKEEDQEYAQVLRMLGNGRLEAHCFDGVKRLCHIR 131
>UniRef50_Q979F7 Cluster: Translation initiation factor 1A; n=6;
Euryarchaeota|Rep: Translation initiation factor 1A -
Thermoplasma volcanium
Length = 123
Score = 69.7 bits (163), Expect = 9e-11
Identities = 32/87 (36%), Positives = 50/87 (57%)
Frame = -1
Query: 686 KEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAK 507
K+ G+ + V KM G RL MC DG R I G++RK++WI + D++++ ++Q K
Sbjct: 35 KKKGEMFGIVEKMEGASRLSVMCEDGYTRNARIPGRMRKRMWIREKDLVIVKPWEFQPEK 94
Query: 506 ADVILKYTPDEARNLKTYGEFPETVRI 426
ADV+ +YT +A L PE + I
Sbjct: 95 ADVVYRYTKTQASYLSRNHMLPEVIDI 121
>UniRef50_Q2FSC8 Cluster: Translation initiation factor eIF-1A; n=3;
Methanomicrobiales|Rep: Translation initiation factor
eIF-1A - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 113
Score = 67.7 bits (158), Expect = 4e-10
Identities = 27/71 (38%), Positives = 44/71 (61%)
Frame = -1
Query: 686 KEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAK 507
K + +++A M+G + C DG+ RL I+GK++K+ WI +GDII+I +QD K
Sbjct: 33 KSNNEQFAIAELMMGANHIRVRCSDGVTRLGRIKGKMKKRAWIREGDIIIIVPWSFQDDK 92
Query: 506 ADVILKYTPDE 474
D+ +YTP +
Sbjct: 93 CDITYRYTPPQ 103
>UniRef50_Q8ZXV9 Cluster: Translation initiation factor 1A; n=3;
Pyrobaculum|Rep: Translation initiation factor 1A -
Pyrobaculum aerophilum
Length = 114
Score = 67.3 bits (157), Expect = 5e-10
Identities = 28/83 (33%), Positives = 50/83 (60%)
Frame = -1
Query: 680 DGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKAD 501
+G+ +V +MLG+GR + +C DG R+ + G+LR+++W+ GD +++ L D+ K D
Sbjct: 26 EGEILGKVIEMLGDGRFKVICADGQIRVARLPGRLRRRLWLKAGDYVIVALWDFDREKGD 85
Query: 500 VILKYTPDEARNLKTYGEFPETV 432
++ KY + LK G F E +
Sbjct: 86 IVHKYEKRDVEELKRRG-FAEAI 107
>UniRef50_Q8TSA3 Cluster: Translation initiation factor 1A 1; n=13;
Euryarchaeota|Rep: Translation initiation factor 1A 1 -
Methanosarcina acetivorans
Length = 111
Score = 67.3 bits (157), Expect = 5e-10
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = -1
Query: 686 KEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAK 507
+E+ + A V +LG RL C DG+ R+ I G ++KK WI +GD++++ ++Q+ K
Sbjct: 29 RENNEILATVESLLGANRLRLRCMDGVVRMGRIPGSMKKKTWIREGDVVIVVPWEFQNEK 88
Query: 506 ADVILKYTPDEARNLKTYG 450
ADVI KYT + L+ G
Sbjct: 89 ADVIWKYTRPQVDWLERKG 107
>UniRef50_Q8SS25 Cluster: EUKARYOTIC TRANSLATION INITIATION FACTOR
1A; n=1; Encephalitozoon cuniculi|Rep: EUKARYOTIC
TRANSLATION INITIATION FACTOR 1A - Encephalitozoon
cuniculi
Length = 119
Score = 66.5 bits (155), Expect = 8e-10
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = -1
Query: 695 LVF-KEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDY 519
LVF +E+G Y Q+ LG G+ + C DG+ R +RG+ ++V + GDI+L+ +RD
Sbjct: 14 LVFAEEEGTVYGQIICPLGQGQFKVSCSDGVYRTAKVRGRDYRRVRMVPGDIVLLRVRDG 73
Query: 518 QDAKADVILKYTPDEARNLKTYGE 447
+ +AD+ KY P E + LK GE
Sbjct: 74 DEKRADIDRKYMPKEVKILKEDGE 97
>UniRef50_A7I5X8 Cluster: Translation initiation factor eIF-1A; n=1;
Candidatus Methanoregula boonei 6A8|Rep: Translation
initiation factor eIF-1A - Methanoregula boonei (strain
6A8)
Length = 131
Score = 65.7 bits (153), Expect = 1e-09
Identities = 25/71 (35%), Positives = 44/71 (61%)
Frame = -1
Query: 686 KEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAK 507
K + + + M+G + CFDG+ R+ I+GK++K+VWI +GD ++I ++QD K
Sbjct: 51 KWNNEMFGSADLMMGANHIRVRCFDGVTRMGRIKGKIKKRVWIREGDTLIIVPWNFQDDK 110
Query: 506 ADVILKYTPDE 474
D+I +Y P +
Sbjct: 111 CDIIYRYLPPQ 121
>UniRef50_A1RXA3 Cluster: Translation initiation factor eIF-1A; n=1;
Thermofilum pendens Hrk 5|Rep: Translation initiation
factor eIF-1A - Thermofilum pendens (strain Hrk 5)
Length = 105
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/74 (36%), Positives = 44/74 (59%)
Frame = -1
Query: 659 VTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTP 480
+ ++LG R C DG RLC I GK +K++W+ GD++L+ D+Q + D+I +YT
Sbjct: 26 IQQLLGFDRARVFCSDGKVRLCRIPGKFKKRMWMKVGDVVLVAPWDFQPERGDIIYRYTS 85
Query: 479 DEARNLKTYGEFPE 438
+E + L+ G E
Sbjct: 86 NELQKLEKKGLLKE 99
>UniRef50_A3DNJ1 Cluster: S1, IF1 family protein; n=1;
Staphylothermus marinus F1|Rep: S1, IF1 family protein -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 111
Score = 63.3 bits (147), Expect = 8e-09
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = -1
Query: 680 DGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKAD 501
+G + + LG + C DG+ R I GK+R++VW+N+GDI+L+ + D+ + +
Sbjct: 21 EGTVICGIIRHLGGDYMVVKCMDGMDRKVRIPGKMRRRVWMNEGDIVLVAIWDFSPERGE 80
Query: 500 VILKYTPDEARNLKTYGEFP 441
VI KY+ E L G P
Sbjct: 81 VIHKYSRSEVTKLVERGVIP 100
>UniRef50_A4QTW8 Cluster: Eukaryotic translation initiation factor
1A-like protein; n=2; Magnaporthe grisea|Rep: Eukaryotic
translation initiation factor 1A-like protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 187
Score = 62.9 bits (146), Expect = 1e-08
Identities = 31/74 (41%), Positives = 44/74 (59%)
Frame = -1
Query: 605 KRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRI 426
+R IRGKLRKK W+ GD++L+ + + K ++ +Y DEAR +K E P VRI
Sbjct: 85 ERHLQIRGKLRKKQWVQAGDLVLMQVWPNERHKGSIVERYPSDEARKIKEEHELPSYVRI 144
Query: 425 NETVVYSVDGLDED 384
NET V + D+D
Sbjct: 145 NETDVGGENRDDDD 158
>UniRef50_A2BML2 Cluster: Translation initiation factor 1A; n=1;
Hyperthermus butylicus DSM 5456|Rep: Translation
initiation factor 1A - Hyperthermus butylicus (strain
DSM 5456 / JCM 9403)
Length = 84
Score = 62.9 bits (146), Expect = 1e-08
Identities = 27/74 (36%), Positives = 45/74 (60%)
Frame = -1
Query: 659 VTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTP 480
+ ++LG L C DG++R I G +R++VWI +GDI+L D++ +ADV+ +Y+
Sbjct: 1 MVRLLGADHLLIRCQDGVERKARIPGSMRRRVWIREGDIVLAAPWDFKPDRADVVYRYSR 60
Query: 479 DEARNLKTYGEFPE 438
+E R L G P+
Sbjct: 61 EELRKLVEKGIVPQ 74
>UniRef50_P57676 Cluster: Translation initiation factor 1A; n=1;
Aeropyrum pernix|Rep: Translation initiation factor 1A -
Aeropyrum pernix
Length = 111
Score = 60.9 bits (141), Expect = 4e-08
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = -1
Query: 686 KEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAK 507
+++G V +++G G LE +C DG + I GK+R++VW+ +GD++L D K
Sbjct: 19 EDEGTMLCIVQRVVGAGFLEVLCTDGEVYMARIPGKMRRRVWMREGDVVLFLPWGTADKK 78
Query: 506 ADVILKYTPDEARNLKTYGEFPE 438
+V+ +Y DE R L PE
Sbjct: 79 GEVVYRYLRDEVRKLIDMNLLPE 101
>UniRef50_UPI00015BAF11 Cluster: translation initiation factor 1A
(aeIF-1A); n=1; Ignicoccus hospitalis KIN4/I|Rep:
translation initiation factor 1A (aeIF-1A) - Ignicoccus
hospitalis KIN4/I
Length = 132
Score = 59.7 bits (138), Expect = 9e-08
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = -1
Query: 695 LVFKEDGQEYAQVTKMLGNGRLEAMCFDG--IKRLCHIRGKLRKKVWINQGDIILIGLRD 522
+V +G+ V +++G C D + R I GKLR++VWI +GDI++ + D
Sbjct: 15 VVLPGEGEVLCVVERIVGADHALIRCLDNPELVRDGRIPGKLRRRVWIREGDIVIATVWD 74
Query: 521 YQDAKADVILKYTPDEARNLKTYGEFPETV 432
+Q KAD++ +Y+ DE + L G P+ +
Sbjct: 75 FQPKKADIVYRYSRDELKRLIVKGLLPKEI 104
>UniRef50_O59280 Cluster: Translation initiation factor 1A; n=7;
Euryarchaeota|Rep: Translation initiation factor 1A -
Pyrococcus horikoshii
Length = 115
Score = 56.4 bits (130), Expect = 9e-07
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -1
Query: 683 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQ-DAK 507
E Q + V + LG G ++ C DG R C I GKLR++VWI GD++++ Q D +
Sbjct: 22 EGNQLFGVVEQALGAGWMDVRCEDGKIRRCRIPGKLRRRVWIRVGDLVIVQPWPVQSDKR 81
Query: 506 ADVILKYTPDEARNLKTYGEFPE 438
D++ +YT + L G+ +
Sbjct: 82 GDIVYRYTQTQVDWLLRKGKITQ 104
>UniRef50_A0RVP5 Cluster: Translation initiation factor 1; n=4;
Archaea|Rep: Translation initiation factor 1 -
Cenarchaeum symbiosum
Length = 185
Score = 55.6 bits (128), Expect = 2e-06
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = -1
Query: 683 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQ-DAK 507
E+G+ +V K+LG+ ++ C D I R IRGKL++++WI DI+++ D++ +
Sbjct: 101 EEGEMLGRVIKLLGSDQVLVKCTDEITRRGRIRGKLKRRIWIRDNDIVILAPWDFKATER 160
Query: 506 ADVILKYTPDEARNLKTYGEFP 441
D+I ++T + LK P
Sbjct: 161 GDIIWRFTLPQVDWLKDNDHLP 182
>UniRef50_Q6LZM1 Cluster: Translation initiation factor 1A; n=6;
Euryarchaeota|Rep: Translation initiation factor 1A -
Methanococcus maripaludis
Length = 104
Score = 55.6 bits (128), Expect = 2e-06
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = -1
Query: 659 VTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQ-DAKADVILKYT 483
+ +MLG R+ C DG R+ I GKL++K+W+ + D++++ + Q D K DVI +YT
Sbjct: 28 IEQMLGASRVRVRCMDGKLRMGRIPGKLKRKIWVREDDVVIVTPWEVQSDEKCDVIWRYT 87
Query: 482 PDEA--RNLKTYGEF 444
+ N K Y +F
Sbjct: 88 KGQVDWLNRKGYLDF 102
>UniRef50_Q00X19 Cluster: Vacuolar sorting protein VPS36; n=2;
Ostreococcus|Rep: Vacuolar sorting protein VPS36 -
Ostreococcus tauri
Length = 558
Score = 47.2 bits (107), Expect = 5e-04
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Frame = +3
Query: 420 LIDADRLWEFSIRL*IPSFVRGIFQDDISFRILIIS*AY*YYVSLIYPHFFS*FPSDVTQ 599
++ A+RL +F++RL F+ +FQDDI IL + A V ++PH + F ++VTQ
Sbjct: 424 IVHAERLRKFAVRLQGARFIGQVFQDDIRLFILEVPQAQEDDVPGVHPHLLAHFTANVTQ 483
Query: 600 AFDAIKAHGLQAAITEHLCDLGVLLSVFLKDQLTFFXFIFVLSSPPIFSSFTF--VFRHV 773
+ H EH L VLL++ L+D+L+F L + + + T RH+
Sbjct: 484 ---PLHPH------AEH---LRVLLTILLEDELSFLISAVALPASAVLPALTLGVALRHL 531
>UniRef50_Q9BSC1 Cluster: MGC11102 protein; n=20; Coelomata|Rep:
MGC11102 protein - Homo sapiens (Human)
Length = 165
Score = 43.2 bits (97), Expect = 0.009
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -1
Query: 674 QEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIG-LRDYQDAKADV 498
Q+ +V + GN E G + L + K RK +WI +GD +++ + + + KA++
Sbjct: 25 QQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVDPIEEGEKVKAEI 84
Query: 497 ILKYTPDEARNLKTYGEFPE 438
D R+L+ G +PE
Sbjct: 85 SFVLCKDHVRSLQKEGFWPE 104
>UniRef50_Q9DFP1 Cluster: Eukaryotic translation initiation factor
1A; n=1; Gillichthys mirabilis|Rep: Eukaryotic
translation initiation factor 1A - Gillichthys mirabilis
(Long-jawed mudsucker)
Length = 70
Score = 40.7 bits (91), Expect = 0.046
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 668 YAQVTKMLGNGRLEAMCFDG 609
YA V KMLGNGRL+AMCFDG
Sbjct: 36 YALVIKMLGNGRLDAMCFDG 55
>UniRef50_Q1M2Y3 Cluster: Translation initiation factor eIF-1A-like;
n=1; Platanus x acerifolia|Rep: Translation initiation
factor eIF-1A-like - Platanus acerifolia (London plane
tree)
Length = 50
Score = 40.3 bits (90), Expect = 0.061
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -1
Query: 482 PDEARNLKTYGEFPETVRINETVVYSVDGLDE 387
PDEAR LK YGE PE R+NE + +D D+
Sbjct: 2 PDEARLLKAYGELPENTRLNEGIAAGLDEEDD 33
>UniRef50_Q1HQA3 Cluster: Translation initiation factor 1a; n=3;
Endopterygota|Rep: Translation initiation factor 1a -
Bombyx mori (Silk moth)
Length = 150
Score = 40.3 bits (90), Expect = 0.061
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = -1
Query: 683 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILI-GLRDYQDAK 507
+D Q +V K GN E G + L + K RK +W+ +GD IL+ + + K
Sbjct: 23 KDNQNIVKVVKSKGNNLHEITTPTGEEYLVSMPTKFRKNIWVKRGDYILVEPIPEGDKVK 82
Query: 506 ADVILKYTPDEARNLKTYGEFPETVRINET 417
A+++ D + K +P+ + N++
Sbjct: 83 AEIVKIMNKDSIKFYKENNVWPKQLEDNKS 112
>UniRef50_Q74MM1 Cluster: NEQ130; n=1; Nanoarchaeum equitans|Rep:
NEQ130 - Nanoarchaeum equitans
Length = 109
Score = 38.3 bits (85), Expect = 0.25
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Frame = -1
Query: 695 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHI---RGKLRKKVWIN--QGDIILIG 531
L E+ + V + LG CFDG++R+C + R + K N +G+ +L+
Sbjct: 17 LAIPEEDEVIGIVEQALGWAHYRVKCFDGVERICRVPRPRRWTKDKFRFNVAEGNYVLVK 76
Query: 530 LRDYQDAKADVILKYTPDEARNLKTYGEFPE 438
K D+I KY + LK G E
Sbjct: 77 PWPNSKDKGDIIYKYDRKQVEALKKLGYLEE 107
>UniRef50_Q3ZJ80 Cluster: Translation initiation factor IF-1,
chloroplast; n=1; Pseudendoclonium akinetum|Rep:
Translation initiation factor IF-1, chloroplast -
Pseudendoclonium akinetum (Green alga)
Length = 109
Score = 37.1 bits (82), Expect = 0.57
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 659 VTKMLGNGRLEAMCFDGIKRLCHIRGKLRKK-VWINQGDIILIGLRDYQDAKADVILKYT 483
+T+ L NG +G K + HI GK+R+ + I GD +++ L Y + +I +
Sbjct: 34 ITQCLSNGMFRVKLENGFKVIAHISGKIRRNFIRILLGDSVIVELSPYDLTRGRIIYRLK 93
Query: 482 P 480
P
Sbjct: 94 P 94
>UniRef50_A7S7U6 Cluster: Predicted protein; n=3; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 115
Score = 35.5 bits (78), Expect = 1.7
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -1
Query: 692 VFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILI-GLRDYQ 516
V E Q+ ++T GN E + L + K RK VWI +GD +++ + +
Sbjct: 19 VVPEGNQQIVKITAGRGNNLHEVQTTEEKNYLVSMPSKFRKNVWIKRGDFVIVEPIEEGN 78
Query: 515 DAKADVILKYTPDEARNLK 459
A+++ P + + LK
Sbjct: 79 KVCAEIVHILYPKQIKYLK 97
>UniRef50_Q7XJP1 Cluster: Putative translation initiation factor;
n=3; Arabidopsis thaliana|Rep: Putative translation
initiation factor - Arabidopsis thaliana (Mouse-ear
cress)
Length = 171
Score = 35.1 bits (77), Expect = 2.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 683 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILI 534
E+ Q AQV + G+ ++E M G L K R+ +WI +G ++I
Sbjct: 20 EECQSIAQVVSLRGSNQIEIMDAKGENSLALFPAKFRESMWIRRGSFVVI 69
>UniRef50_Q7VCW0 Cluster: Type II restriction enzyme, methylase
subunit; n=17; cellular organisms|Rep: Type II
restriction enzyme, methylase subunit - Prochlorococcus
marinus
Length = 915
Score = 34.7 bits (76), Expect = 3.0
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -1
Query: 590 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 417
I+GKLR +W+N D Y+DAK + L Y ++ R +T + P T ++ +T
Sbjct: 690 IKGKLRYCIWVNDDD--------YEDAKKNQWLMYRFEQVREKRTASDRPTTKKLAKT 739
>UniRef50_A3ADF4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 230
Score = 34.7 bits (76), Expect = 3.0
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 680 DGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILI 534
+G+ QV + G+ +E M G+K L K +K WI G+ +++
Sbjct: 21 EGESIMQVLALRGSNVIEVMDAKGVKSLALFPAKFQKSFWIKNGNFVVV 69
>UniRef50_A0DSZ4 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=5; cellular organisms|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 3255
Score = 34.7 bits (76), Expect = 3.0
Identities = 13/53 (24%), Positives = 30/53 (56%)
Frame = -1
Query: 572 KKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINETV 414
K+VW ++ DI+L + YQ DV L + ++ + ++ G+ + ++ +T+
Sbjct: 287 KRVWSHKQDIMLSDINKYQQEFCDVFLLFLKNDWKEIEQLGDVDQILQFKQTI 339
>UniRef50_Q6K1L7 Cluster: Obelix; n=5; Amniota|Rep: Obelix - Gallus
gallus (Chicken)
Length = 188
Score = 34.3 bits (75), Expect = 4.0
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -1
Query: 674 QEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIG-LRDYQDAKADV 498
Q +V GN E DG + L + + R VWI +GD +L+ + + KA++
Sbjct: 25 QRIVRVLGSPGNNLHEVETADGSRFLASMPPRFRHHVWIKRGDFLLVDPIEEGAKVKAEM 84
Query: 497 ILKYTPDEARNLKTYGEFP 441
L R L+ G +P
Sbjct: 85 ALVLLRPHVRFLQRQGLWP 103
>UniRef50_Q8IQ13 Cluster: CG31957-PA; n=3; Diptera|Rep: CG31957-PA -
Drosophila melanogaster (Fruit fly)
Length = 159
Score = 33.1 bits (72), Expect = 9.3
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = -1
Query: 674 QEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILI-GLRDYQDAKADV 498
Q+ A+V GN E D L + K RK +W+ +GD +L+ + + KA++
Sbjct: 30 QQIARVISSRGNNLHEVETVDETF-LVSMPNKFRKSMWVKRGDFLLVEPIEEGDKVKAEI 88
Query: 497 ILKYTPDEARNLKTYGEFPE 438
TP+ + +P+
Sbjct: 89 CKILTPEHIKEYTKAAIWPD 108
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,574,659
Number of Sequences: 1657284
Number of extensions: 11478972
Number of successful extensions: 25027
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 24363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25017
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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