Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12d05
(877 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal ... 238 2e-61
UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126; Euka... 199 9e-50
UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037... 175 9e-43
UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|R... 167 4e-40
UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10; Fungi/... 163 5e-39
UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117... 162 1e-38
UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular o... 159 9e-38
UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6; Fungi/M... 151 3e-35
UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metaz... 150 5e-35
UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius... 145 1e-33
UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostel... 132 1e-29
UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10; Trypa... 125 1e-27
UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n... 124 3e-27
UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus... 124 4e-27
UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n... 123 5e-27
UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2; Crypto... 121 2e-26
UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=... 120 4e-26
UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n... 120 5e-26
UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S riboso... 118 2e-25
UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lambl... 111 2e-23
UniRef50_Q012N9 Cluster: RL23A_FRIAG 60S ribosomal protein L23A;... 108 2e-22
UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S riboso... 93 6e-18
UniRef50_A0E9R4 Cluster: Chromosome undetermined scaffold_85, wh... 92 1e-17
UniRef50_Q9LWB5 Cluster: 50S ribosomal protein L23, chloroplast ... 90 6e-17
UniRef50_Q98RV5 Cluster: 60S ribosomal protein L23A; n=1; Guilla... 83 7e-15
UniRef50_Q8TY92 Cluster: 50S ribosomal protein L23P; n=27; Archa... 83 1e-14
UniRef50_UPI0000F2CCBA Cluster: PREDICTED: similar to hCG2001000... 81 5e-14
UniRef50_A2DUV8 Cluster: Ribosomal protein L23, putative; n=5; T... 78 3e-13
UniRef50_UPI0000D65CF0 Cluster: PREDICTED: similar to hCG2001000... 75 2e-12
UniRef50_UPI0000DD7E10 Cluster: PREDICTED: similar to 60S riboso... 72 2e-11
UniRef50_O26112 Cluster: 50S ribosomal protein L23P; n=2; Methan... 67 5e-10
UniRef50_O28356 Cluster: 50S ribosomal protein L23P; n=2; Euryar... 66 8e-10
UniRef50_Q2NFV8 Cluster: 50S ribosomal protein L23P; n=2; Methan... 64 4e-09
UniRef50_P12732 Cluster: 50S ribosomal protein L23P; n=4; Haloba... 62 1e-08
UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;... 61 3e-08
UniRef50_A3H7W7 Cluster: 50S ribosomal protein L23; n=1; Caldivi... 61 4e-08
UniRef50_Q0W1Y7 Cluster: 50S ribosomal protein L23P; n=2; Euryar... 60 1e-07
UniRef50_Q673S7 Cluster: 50S ribosomal protein L23; n=2; environ... 57 7e-07
UniRef50_Q2FU93 Cluster: 50S ribosomal protein L23P; n=1; Methan... 53 1e-05
UniRef50_Q6L1C5 Cluster: 50S ribosomal protein L23P; n=2; Thermo... 52 1e-05
UniRef50_Q5FTY5 Cluster: 50S ribosomal protein L23; n=58; Proteo... 51 4e-05
UniRef50_Q748Z1 Cluster: 50S ribosomal protein L23; n=11; Bacter... 51 4e-05
UniRef50_Q6N4T7 Cluster: 50S ribosomal protein L23; n=12; Proteo... 50 6e-05
UniRef50_P0ADZ3 Cluster: 50S ribosomal protein L23; n=59; Gammap... 50 1e-04
UniRef50_Q8XHS5 Cluster: 50S ribosomal protein L23; n=14; Clostr... 49 2e-04
UniRef50_A0T0X4 Cluster: Chloroplast 50S ribosomal protein L23; ... 49 2e-04
UniRef50_A7I5P1 Cluster: Ribosomal protein L25/L23; n=1; Candida... 48 2e-04
UniRef50_Q15YN7 Cluster: 50S ribosomal protein L23; n=8; Gammapr... 48 2e-04
UniRef50_O66433 Cluster: 50S ribosomal protein L23; n=10; Bacter... 48 2e-04
UniRef50_A6DPN6 Cluster: 50S ribosomal protein L23; n=1; Lentisp... 48 3e-04
UniRef50_Q7VKD4 Cluster: 50S ribosomal protein L23; n=27; Gammap... 48 4e-04
UniRef50_Q6B8V5 Cluster: Chloroplast 50S ribosomal protein L23; ... 48 4e-04
UniRef50_Q02W26 Cluster: 50S ribosomal protein L23; n=7; Bacilli... 47 7e-04
UniRef50_Q1Q136 Cluster: Strongly similar to 50S ribosomal prote... 46 0.001
UniRef50_A3CSZ9 Cluster: 50S ribosomal protein L23; n=2; Methano... 46 0.001
UniRef50_Q8PV48 Cluster: 50S ribosomal protein L23P; n=4; Methan... 46 0.002
UniRef50_Q6YR18 Cluster: 50S ribosomal protein L23; n=3; Candida... 45 0.002
UniRef50_Q1VGG2 Cluster: 50S ribosomal protein L23; n=1; Psychro... 45 0.002
UniRef50_Q6SG46 Cluster: 50S ribosomal protein L23; n=3; Bacteri... 45 0.003
UniRef50_A6NXD1 Cluster: 50S ribosomal protein L23; n=1; Bactero... 44 0.004
UniRef50_Q4G363 Cluster: Chloroplast 50S ribosomal protein L23; ... 44 0.004
UniRef50_A1Y9U8 Cluster: 50S ribosomal protein L23; n=7; Bactero... 44 0.005
UniRef50_Q6A6M8 Cluster: 50S ribosomal protein L23; n=36; Bacter... 44 0.005
UniRef50_A5TVD5 Cluster: 50S ribosomal protein L23; n=3; Fusobac... 44 0.007
UniRef50_P38512 Cluster: 50S ribosomal protein L23; n=7; Bacteri... 44 0.007
UniRef50_A6BIQ4 Cluster: 50S ribosomal protein L23; n=23; Firmic... 43 0.009
UniRef50_Q5BHZ4 Cluster: GM06171p; n=1; Drosophila melanogaster|... 43 0.009
UniRef50_P94269 Cluster: 50S ribosomal protein L23; n=3; Borreli... 43 0.009
UniRef50_Q06SH7 Cluster: Chloroplast 50S ribosomal protein L23; ... 43 0.009
UniRef50_A7DSZ2 Cluster: Ribosomal protein L25/L23; n=1; Candida... 42 0.016
UniRef50_Q74N77 Cluster: 50S ribosomal protein L23P; n=3; cellul... 42 0.016
UniRef50_Q6KI53 Cluster: 50S ribosomal protein L23; n=1; Mycopla... 42 0.016
UniRef50_P75578 Cluster: 50S ribosomal protein L23; n=2; Mycopla... 42 0.021
UniRef50_Q97EI0 Cluster: 50S ribosomal protein L23; n=26; Firmic... 42 0.027
UniRef50_Q5GSU6 Cluster: 50S ribosomal protein L23; n=2; Wolbach... 42 0.027
UniRef50_Q9RA57 Cluster: 50S ribosomal protein L23; n=14; Bacter... 42 0.027
UniRef50_Q5LLU8 Cluster: 50S ribosomal protein L23; n=55; Alphap... 41 0.036
UniRef50_Q7NPG8 Cluster: 50S ribosomal protein L23; n=7; cellula... 41 0.036
UniRef50_Q1UZG5 Cluster: 50S ribosomal protein L23; n=2; Candida... 41 0.047
UniRef50_Q7V9W4 Cluster: 50S ribosomal protein L23; n=32; cellul... 40 0.063
UniRef50_Q6AP69 Cluster: 50S ribosomal protein L23; n=2; Deltapr... 40 0.063
UniRef50_Q9L0D8 Cluster: 50S ribosomal protein L23; n=16; Actino... 40 0.083
UniRef50_A5CCL0 Cluster: 50S ribosomal protein L23; n=1; Orienti... 40 0.083
UniRef50_Q14JB8 Cluster: 50S ribosomal protein L23; n=8; Francis... 40 0.083
UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;... 40 0.11
UniRef50_Q0EW38 Cluster: 50S ribosomal protein L23; n=1; Maripro... 40 0.11
UniRef50_Q553D8 Cluster: Putative uncharacterized protein; n=2; ... 39 0.14
UniRef50_A5KRQ3 Cluster: 50S ribosomal protein L23; n=1; candida... 39 0.19
UniRef50_Q8A478 Cluster: 50S ribosomal protein L23; n=11; Bacter... 38 0.25
UniRef50_Q1VLV7 Cluster: 50S ribosomal protein L23; n=2; Flavoba... 38 0.33
UniRef50_Q7MTL5 Cluster: 50S ribosomal protein L23; n=8; Bactero... 37 0.58
UniRef50_Q4A5C3 Cluster: 50S ribosomal protein L23; n=1; Mycopla... 37 0.58
UniRef50_Q82X86 Cluster: 50S ribosomal protein L23; n=5; Betapro... 37 0.77
UniRef50_Q7VQE6 Cluster: 50S ribosomal protein L23; n=1; Candida... 37 0.77
UniRef50_P06390 Cluster: Chloroplast 50S ribosomal protein L23; ... 37 0.77
UniRef50_Q8EUB5 Cluster: 50S ribosomal protein L23; n=1; Mycopla... 36 1.4
UniRef50_Q81VS8 Cluster: 50S ribosomal protein L23; n=56; Firmic... 36 1.8
UniRef50_Q9PQQ8 Cluster: 50S ribosomal protein L23; n=1; Ureapla... 35 2.4
UniRef50_Q4N6P3 Cluster: Ribosomal protein L223, putative; n=2; ... 35 2.4
UniRef50_Q2LQ99 Cluster: 50S ribosomal protein L23; n=4; Bacteri... 35 2.4
UniRef50_O52334 Cluster: 50S ribosomal protein L23; n=2; Mycopla... 35 2.4
UniRef50_Q1KVT6 Cluster: Chloroplast 50S ribosomal protein L23; ... 35 2.4
UniRef50_P10140 Cluster: 50S ribosomal protein L23; n=4; Mollicu... 35 3.1
UniRef50_Q08ZJ6 Cluster: 50S ribosomal protein L23; n=1; Stigmat... 34 5.5
UniRef50_A5K3S7 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_Q6C803 Cluster: Yarrowia lipolytica chromosome D of str... 34 5.5
UniRef50_Q6F1Z2 Cluster: 50S ribosomal protein L23; n=3; Firmicu... 34 5.5
UniRef50_UPI0001555FAF Cluster: PREDICTED: similar to ribosomal ... 33 7.2
UniRef50_Q06VN4 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_Q6CUR1 Cluster: Similar to sp|P53583 Saccharomyces cere... 33 9.5
>UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal
protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to ribosomal protein L23Ae - Nasonia vitripennis
Length = 247
Score = 238 bits (582), Expect = 2e-61
Identities = 110/133 (82%), Positives = 121/133 (90%)
Frame = -3
Query: 404 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNI 225
PV KALKAQ+K++KG G RVRKIR SVHF RPKTF PPR+PKYPRKS+P RNRMDA NI
Sbjct: 108 PVQKALKAQKKILKGVQGSRVRKIRTSVHFHRPKTFRPPRNPKYPRKSVPNRNRMDAVNI 167
Query: 224 IKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 45
IKFPLT+EAAMKKIEDNNTLVFIVHT ANK+HIK++VKKLYD++V KVNTLIRPDGKKKA
Sbjct: 168 IKFPLTTEAAMKKIEDNNTLVFIVHTRANKYHIKSSVKKLYDVDVLKVNTLIRPDGKKKA 227
Query: 44 YVRLARDYDALDV 6
YVRL RDYDALDV
Sbjct: 228 YVRLTRDYDALDV 240
>UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126;
Eukaryota|Rep: 60S ribosomal protein L23a - Homo sapiens
(Human)
Length = 156
Score = 199 bits (485), Expect = 9e-50
Identities = 96/130 (73%), Positives = 108/130 (83%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 36
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVR
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 139
Query: 35 LARDYDALDV 6
LA DYDALDV
Sbjct: 140 LAPDYDALDV 149
>UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037;
n=99; Fungi/Metazoa group|Rep: Uncharacterized protein
ENSP00000339037 - Homo sapiens (Human)
Length = 156
Score = 175 bits (427), Expect = 9e-43
Identities = 85/130 (65%), Positives = 101/130 (77%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ V+KG H + +KI S FRRPKT + R PKYP KS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHNHKKKKIHTSPTFRRPKTLQLRRQPKYPWKSTPRRNKLDHYAIIKF 79
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 36
PLT+E+AMKK DNNT VF+V ANKH IK AVK+LYDI++ KVNTLI PDG+KKAYV
Sbjct: 80 PLTTESAMKKTGDNNTRVFMVDVKANKHQIKQAVKRLYDIDMIKVNTLIWPDGEKKAYVP 139
Query: 35 LARDYDALDV 6
LA DYDALDV
Sbjct: 140 LAPDYDALDV 149
>UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|Rep:
Ribosomal protein L23 - Spinacia oleracea (Spinach)
Length = 155
Score = 167 bits (405), Expect = 4e-40
Identities = 85/136 (62%), Positives = 99/136 (72%), Gaps = 3/136 (2%)
Frame = -3
Query: 404 PVTKALKAQRKVVKGEH---GKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDA 234
P +ALKA + V G + K +KIR V F RPKTF+ R+PKYPR S RN++D
Sbjct: 13 PKAQALKAAKAVKSGSNILKKKASKKIRTKVTFHRPKTFKKERNPKYPRISATPRNKLDH 72
Query: 233 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 54
Y I+K+PLT+E+AMKKIEDNNTLVFIV A+K IK AVKK+YDI KVNTLIRPDG
Sbjct: 73 YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQSKKVNTLIRPDGT 132
Query: 53 KKAYVRLARDYDALDV 6
KKAYVRL DYDALDV
Sbjct: 133 KKAYVRLTPDYDALDV 148
>UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 142
Score = 163 bits (396), Expect = 5e-39
Identities = 76/133 (57%), Positives = 98/133 (73%)
Frame = -3
Query: 404 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNI 225
P KA A++ VVKG +GK+ K+R S FR PKT + R PKY K++P NR+D+Y +
Sbjct: 3 PSAKATAAKKAVVKGTNGKKALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKV 62
Query: 224 IKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 45
I+ P+TSE AMKK+ED N LVF V ANK+ IK AVK+LY+++V KVNTL+RP+G KKA
Sbjct: 63 IEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTKKA 122
Query: 44 YVRLARDYDALDV 6
YVRL DYDALD+
Sbjct: 123 YVRLTADYDALDI 135
>UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117;
n=5; Eutheria|Rep: Uncharacterized protein
ENSP00000332117 - Homo sapiens (Human)
Length = 156
Score = 162 bits (393), Expect = 1e-38
Identities = 78/130 (60%), Positives = 98/130 (75%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++ Y +IKF
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKF 79
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 36
PLT+E+A+K+ E+NNTL+F V ANKH IK AVKKLYD +VA+V TLI PDG+KKA VR
Sbjct: 80 PLTTESAVKRTEENNTLLFTVDVKANKHQIKQAVKKLYDGDVAEVTTLIPPDGEKKACVR 139
Query: 35 LARDYDALDV 6
LA DYDALDV
Sbjct: 140 LAPDYDALDV 149
>UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular
organisms|Rep: Ribosomal protein L23a - Taenia asiatica
(Asian tapeworm)
Length = 204
Score = 159 bits (386), Expect = 9e-38
Identities = 77/132 (58%), Positives = 99/132 (75%)
Frame = -3
Query: 401 VTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 222
V +ALKAQ+ + G H K +K+ ++ FRRPKT+ PPR PK R +PKRN++DA+ II
Sbjct: 66 VARALKAQKAINIGAHTKGKKKVMKNIRFRRPKTYRPPRCPKDRRFEIPKRNKLDAFRII 125
Query: 221 KFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 42
+ P+T+EAAMKKIEDN+TLVF+V ANK IKAAV+++Y I VAKVNTL P KKAY
Sbjct: 126 RHPVTTEAAMKKIEDNDTLVFVVDRRANKPAIKAAVQEMYKIKVAKVNTLNCPKNIKKAY 185
Query: 41 VRLARDYDALDV 6
V+L D+DALDV
Sbjct: 186 VKLPPDFDALDV 197
>UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Chaetomium globosum (Soil fungus)
Length = 156
Score = 151 bits (365), Expect = 3e-35
Identities = 73/130 (56%), Positives = 89/130 (68%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
+A KA + +KG H + K+R S F RPKT R PKYPRKS+P R+D + II
Sbjct: 19 QAKKAAQAALKGVHAHKRTKVRLSTTFHRPKTLVLSRAPKYPRKSVPHEPRLDEHKIIVH 78
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 36
PL +E A+KKIE+ NTLVFIV ANK IK A+KKLYDI+ K+NTLIRPDG KKA+ R
Sbjct: 79 PLNTEGALKKIEEQNTLVFIVDVKANKAQIKQALKKLYDIDTVKINTLIRPDGSKKAFAR 138
Query: 35 LARDYDALDV 6
L D DALD+
Sbjct: 139 LTADVDALDI 148
>UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metazoa
group|Rep: 60S ribosomal protein - Oncorhynchus mykiss
(Rainbow trout) (Salmo gairdneri)
Length = 96
Score = 150 bits (363), Expect = 5e-35
Identities = 72/89 (80%), Positives = 79/89 (88%)
Frame = -3
Query: 272 PRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN 93
PRKS +RN++D Y IIKFPLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+
Sbjct: 1 PRKSASRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKHAVKKLYDID 60
Query: 92 VAKVNTLIRPDGKKKAYVRLARDYDALDV 6
VAKVNTLIRPDG+KKAYVRLA DYDALDV
Sbjct: 61 VAKVNTLIRPDGEKKAYVRLAPDYDALDV 89
>UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius
melpomene|Rep: Ribosomal protein L23a - Heliconius
melpomene
Length = 221
Score = 145 bits (352), Expect = 1e-33
Identities = 71/93 (76%), Positives = 75/93 (80%)
Frame = -3
Query: 470 SKLKIAXXXXXXXXXXXXXXXKPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEP 291
+KLKIA KPV KALK Q+KVVKGEHGKRVRKIR SVHFRRPKTFEP
Sbjct: 129 AKLKIAPKPKKTGIKGQKKVVKPVVKALKIQKKVVKGEHGKRVRKIRTSVHFRRPKTFEP 188
Query: 290 PRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAM 192
PR+PKYPRKSLPKRNRMDAYNIIK+PLTSEAAM
Sbjct: 189 PRNPKYPRKSLPKRNRMDAYNIIKYPLTSEAAM 221
>UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L23a -
Dictyostelium discoideum AX4
Length = 169
Score = 132 bits (319), Expect = 1e-29
Identities = 64/130 (49%), Positives = 87/130 (66%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KA A V KG K RK+R SV FRRP T P+ P YPR+S+ K +MD + I+K
Sbjct: 33 KAKAAASAVKKGVSNKSTRKVRTSVIFRRPVTLNNPKKPAYPRRSVNKITKMDQFRILKA 92
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 36
PLT+E+A +KIE +NT+ F+V ANK + AV K+YD+ V +VNTLI P G+KKA+V
Sbjct: 93 PLTTESATQKIEGSNTITFMVDMFANKSQVADAVAKMYDVKVKRVNTLITPRGEKKAFVT 152
Query: 35 LARDYDALDV 6
L+ +++A DV
Sbjct: 153 LSPEFEAADV 162
>UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein L23a -
Trypanosoma brucei brucei
Length = 164
Score = 125 bits (302), Expect = 1e-27
Identities = 60/111 (54%), Positives = 75/111 (67%)
Frame = -3
Query: 341 RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLV 162
RK FRRP T+ P K +N+ DA+ II++PLT++ AMKKIE+NNTL
Sbjct: 46 RKAYTRPQFRRPHTYRRPATVKPSSNVSAIKNKWDAFRIIRYPLTTDKAMKKIEENNTLT 105
Query: 161 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALD 9
FIV + ANK IK A++KLY + KVNTLIRPDG KKAY+RL+ YDALD
Sbjct: 106 FIVDSRANKTEIKKAIRKLYQVKTVKVNTLIRPDGLKKAYIRLSASYDALD 156
>UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n=2;
Theileria|Rep: 60S ribosomal protein L23a, putative -
Theileria parva
Length = 152
Score = 124 bits (299), Expect = 3e-27
Identities = 66/131 (50%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRK-SLPKRNRMDAYNIIK 219
KA A R V K K+V+ RN+ HF R +T R PKY +K ++D ++I++
Sbjct: 16 KAKLASRSVKKSTSVKKVKTRRNT-HFFRGRTLSLKRTPKYEKKVKTAYTKKLDKFSIVR 74
Query: 218 FPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYV 39
+PLT+E+AMK IE+ NTLVF+V ANK + AV +LYDI VNTLIRPDG+KKA+V
Sbjct: 75 YPLTTESAMKMIEELNTLVFVVDPRANKAKVAKAVSQLYDITPVHVNTLIRPDGQKKAFV 134
Query: 38 RLARDYDALDV 6
RL+ D DALDV
Sbjct: 135 RLSPDQDALDV 145
>UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus
cervinus|Rep: Ribosomal protein L23Ae - Dascillus
cervinus
Length = 212
Score = 124 bits (298), Expect = 4e-27
Identities = 55/72 (76%), Positives = 62/72 (86%)
Frame = -3
Query: 404 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNI 225
PV KAL Q+KV+KG G R RKIRNSVHF RPKTF PPR+PKYPRKS+P R+RMDAYNI
Sbjct: 141 PVQKALNVQKKVIKGPFGTRARKIRNSVHFHRPKTFRPPRNPKYPRKSVPTRSRMDAYNI 200
Query: 224 IKFPLTSEAAMK 189
IK+PLT+EAAMK
Sbjct: 201 IKYPLTTEAAMK 212
>UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n=3;
Plasmodium|Rep: 60S ribosomal protein L23a, putative -
Plasmodium vivax
Length = 195
Score = 123 bits (297), Expect = 5e-27
Identities = 65/127 (51%), Positives = 87/127 (68%), Gaps = 2/127 (1%)
Frame = -3
Query: 380 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPR--KSLPKRNRMDAYNIIKFPLT 207
Q K E K+ +KI S+ F+RPKT + P++PK P+ KS K+ +D Y I+K+PLT
Sbjct: 63 QVKKAAAEESKKKKKITTSIKFKRPKTLKLPKNPKCPKVIKSCYKKT-LDKYGILKYPLT 121
Query: 206 SEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
SE AMKKIE+ NTLVFI A+K I +VK L+ I+ KVN L R +G KKAYVRL++
Sbjct: 122 SEKAMKKIEEINTLVFICDKRADKKKITKSVKNLFGISCEKVNVLNRLNGDKKAYVRLSK 181
Query: 26 DYDALDV 6
D+DAL+V
Sbjct: 182 DHDALEV 188
>UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L23A -
Cryptosporidium parvum Iowa II
Length = 156
Score = 121 bits (292), Expect = 2e-26
Identities = 64/132 (48%), Positives = 85/132 (64%), Gaps = 1/132 (0%)
Frame = -3
Query: 398 TKA-LKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 222
TKA K + VK KIR V F RPKT + R+PKY RKS+ + +D Y+II
Sbjct: 18 TKANAKKTAQAVKNSKRSSTTKIRTRVQFYRPKTLKLQRNPKYERKSIKTQKSLDCYDII 77
Query: 221 KFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 42
K P+T+E+AMK +E NT+VF+V+ ANK IK AV KLYD+ VA VNT+ KKA+
Sbjct: 78 KRPITTESAMKMVETLNTIVFLVNERANKTQIKYAVNKLYDVKVANVNTVNTFGDGKKAF 137
Query: 41 VRLARDYDALDV 6
V+L+ D +A+DV
Sbjct: 138 VKLSPDVEAVDV 149
>UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L23, putative -
Babesia bovis
Length = 154
Score = 120 bits (290), Expect = 4e-26
Identities = 64/131 (48%), Positives = 83/131 (63%), Gaps = 1/131 (0%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNR-MDAYNIIK 219
K K VK + KIR + HF R +T P+ PK R + ++ +D ++IIK
Sbjct: 17 KQAKIAANSVKKSTTAKGYKIRRNTHFFRGRTLTLPKSPKVKRHLITAHSKKLDKFSIIK 76
Query: 218 FPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYV 39
+PLT+E +MK IE+ NTLVFIV + ANK I AV +LYD+ +VNTL RPDG KKAYV
Sbjct: 77 YPLTTEKSMKMIEEINTLVFIVDSRANKEKIAKAVSELYDVKCVRVNTLNRPDGLKKAYV 136
Query: 38 RLARDYDALDV 6
RL+ D DALDV
Sbjct: 137 RLSPDQDALDV 147
>UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n=2;
Plasmodium chabaudi|Rep: 60S ribosomal protein L23a,
putative - Plasmodium chabaudi
Length = 147
Score = 120 bits (289), Expect = 5e-26
Identities = 62/116 (53%), Positives = 83/116 (71%), Gaps = 2/116 (1%)
Frame = -3
Query: 347 RVRKIRNSVHFRRPKTFEPPRHPKYPR--KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDN 174
+++KI S+ F+RP+T ++PK P+ KS + +D Y IIK+PLTSE AMKKIE+
Sbjct: 26 KMQKITTSIRFKRPRTLRLKKNPKCPKILKSCHTKT-LDKYGIIKYPLTSEKAMKKIEEI 84
Query: 173 NTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDV 6
NTLVFI A+K IK +VK L+DI AKVN L R +G KKAYVRL++D+DAL+V
Sbjct: 85 NTLVFICDKRADKRKIKKSVKSLFDIKCAKVNVLNRLNGDKKAYVRLSKDHDALEV 140
>UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 169
Score = 118 bits (284), Expect = 2e-25
Identities = 59/81 (72%), Positives = 65/81 (80%)
Frame = -3
Query: 308 PKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHH 129
PKT R PK PRKS P+RN++D Y IIKFPLT+E+AMKKIED NTLVFIV ANKH
Sbjct: 3 PKTLHLRRQPKCPRKSAPRRNKLDHYAIIKFPLTTESAMKKIED-NTLVFIVDVKANKHQ 61
Query: 128 IKAAVKKLYDINVAKVNTLIR 66
IK AVKKLYDI+VAKVN LIR
Sbjct: 62 IKQAVKKLYDIDVAKVNALIR 82
>UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_12155_12580 - Giardia lamblia
ATCC 50803
Length = 141
Score = 111 bits (267), Expect = 2e-23
Identities = 58/132 (43%), Positives = 87/132 (65%), Gaps = 2/132 (1%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRV--RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 222
+ALKAQ+ ++ HG RV +KIR +VHF RPKT + P YPR + K + D +++
Sbjct: 6 QALKAQKAIL---HGTRVEAKKIRTNVHFFRPKTLVHKKAPLYPRNPIKKGSWDDPCDLL 62
Query: 221 KFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 42
++P+ ++ +IE NNT+VFIV A+K I+ A + +++ VA+VNTLI P G KKA+
Sbjct: 63 RYPIKTDENTTQIEKNNTIVFIVDRRASKPEIRKAFETVFETKVARVNTLITPLGLKKAF 122
Query: 41 VRLARDYDALDV 6
+RLA D A+DV
Sbjct: 123 IRLAPDVQAMDV 134
>UniRef50_Q012N9 Cluster: RL23A_FRIAG 60S ribosomal protein L23A;
n=2; Ostreococcus|Rep: RL23A_FRIAG 60S ribosomal protein
L23A - Ostreococcus tauri
Length = 259
Score = 108 bits (260), Expect = 2e-22
Identities = 73/173 (42%), Positives = 94/173 (54%), Gaps = 41/173 (23%)
Frame = -3
Query: 401 VTKALKAQRKVVKGEHGKRVRK-IRNSVHFR----------------RPKTFEPPRHPKY 273
V KA KA + V KG GK ++K + H R RP+T + R P Y
Sbjct: 80 VNKASKAAKFVKKGAKGKLLKKRFSATFHSRETDHRERLTSDVLTVYRPRTLKHERKPAY 139
Query: 272 PRKSLPKRNRMDAYN------------------------IIKFPLTSEAAMKKIEDNNTL 165
PR S+P + ++D ++ I+K PL +E A+ K E+NNTL
Sbjct: 140 PRVSVPSKPKLDRFSVPEDSIDGRETDRRTLSSLNHSSQILKHPLANETALAKTENNNTL 199
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDV 6
VFIV ANK IK AVK++YDI+ AKVNTLIRP+G KKAY RL D+DALDV
Sbjct: 200 VFIVDARANKRQIKEAVKRMYDIDCAKVNTLIRPNGDKKAYCRLTADHDALDV 252
>UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 175
Score = 93.5 bits (222), Expect = 6e-18
Identities = 44/72 (61%), Positives = 53/72 (73%)
Frame = -3
Query: 287 RHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKK 108
R PKYPRKS P+RN+ D I+KF LT+++AMK IEDNNT VFIV ANKH I+ A +
Sbjct: 48 REPKYPRKSTPRRNKHDHDAIVKFSLTTKSAMKNIEDNNTFVFIVDAKANKHQIEQAGET 107
Query: 107 LYDINVAKVNTL 72
LYDI+ A V TL
Sbjct: 108 LYDIDTANVTTL 119
>UniRef50_A0E9R4 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=7; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_85, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 150
Score = 92.3 bits (219), Expect = 1e-17
Identities = 53/136 (38%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
Frame = -3
Query: 398 TKALKAQRKVVKGEHGKRVRKIR----NSVHFRRPKTF-EPPRHPKYPRKSLPKRNRMDA 234
T KAQ+ K+V + R N H +P PR + R+ P +D
Sbjct: 8 TTTQKAQKAAKNARVAKKVIRARTHFQNRFHTAKPLALARKPRFTRLTRQLKPITKGLDF 67
Query: 233 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 54
N++K PL +E MKK+ED NT+VF V+ A K IK A K+Y++ V KVN L GK
Sbjct: 68 QNVLKHPLITEKDMKKMEDENTMVFYVNQKATKPQIKRAFSKIYEVKVRKVNILNTFGGK 127
Query: 53 KKAYVRLARDYDALDV 6
KKAY+RL + DAL++
Sbjct: 128 KKAYIRLGGENDALNL 143
>UniRef50_Q9LWB5 Cluster: 50S ribosomal protein L23, chloroplast
precursor; n=1; Spinacia oleracea|Rep: 50S ribosomal
protein L23, chloroplast precursor - Spinacia oleracea
(Spinach)
Length = 198
Score = 90.2 bits (214), Expect = 6e-17
Identities = 44/102 (43%), Positives = 66/102 (64%)
Frame = -3
Query: 311 RPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKH 132
+PKT + + KYPR+ L D Y I++ P+ +EAA+K I D N+L+F V A+K
Sbjct: 92 QPKTSKKAKKLKYPRRIL------DVYQILQSPIITEAAIKNIADENSLLFTVDVRADKK 145
Query: 131 HIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDV 6
I+ A+ + + V KVNTLIRPDG KKAY+ L ++Y+A ++
Sbjct: 146 MIREAISNFFGVKVRKVNTLIRPDGTKKAYIMLNKEYNASEL 187
>UniRef50_Q98RV5 Cluster: 60S ribosomal protein L23A; n=1;
Guillardia theta|Rep: 60S ribosomal protein L23A -
Guillardia theta (Cryptomonas phi)
Length = 117
Score = 83.4 bits (197), Expect = 7e-15
Identities = 39/87 (44%), Positives = 61/87 (70%)
Frame = -3
Query: 266 KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVA 87
K++ KRN + Y + +P+TSE+AMKKI+ +NTL F+V NK+ +K + KL+ +
Sbjct: 26 KNIQKRNFI--YKQLIYPVTSESAMKKIQTSNTLTFLVEPMNNKNSLKKIISKLFKVKTI 83
Query: 86 KVNTLIRPDGKKKAYVRLARDYDALDV 6
K+N+LI +GKKK +V+L ++DALDV
Sbjct: 84 KINSLISMNGKKKIFVKLGPEHDALDV 110
>UniRef50_Q8TY92 Cluster: 50S ribosomal protein L23P; n=27;
Archaea|Rep: 50S ribosomal protein L23P - Methanopyrus
kandleri
Length = 95
Score = 82.6 bits (195), Expect = 1e-14
Identities = 39/78 (50%), Positives = 55/78 (70%)
Frame = -3
Query: 239 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPD 60
D ++++ +P+ +E AM+ +E N L FIV ANK IK AV++L+D+ V KVNTLI P
Sbjct: 11 DPHDVLLYPVATEKAMRLMEAENKLTFIVRRDANKPLIKKAVEELFDVEVEKVNTLITPT 70
Query: 59 GKKKAYVRLARDYDALDV 6
G+KKAYV+L +Y A DV
Sbjct: 71 GEKKAYVKLKPEYRAEDV 88
>UniRef50_UPI0000F2CCBA Cluster: PREDICTED: similar to hCG2001000;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
hCG2001000 - Monodelphis domestica
Length = 144
Score = 80.6 bits (190), Expect = 5e-14
Identities = 44/79 (55%), Positives = 54/79 (68%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 63
+D Y IIKFPL +E+AMKKIED++ LVF NK VKKLYDI VAKV+TL
Sbjct: 41 LDHYAIIKFPLPTESAMKKIEDDDILVFPADIKVNKQ----VVKKLYDIYVAKVSTLFWL 96
Query: 62 DGKKKAYVRLARDYDALDV 6
DG+KK Y+ L + +ALDV
Sbjct: 97 DGEKKTYIYLTPNCNALDV 115
>UniRef50_A2DUV8 Cluster: Ribosomal protein L23, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L23,
putative - Trichomonas vaginalis G3
Length = 140
Score = 77.8 bits (183), Expect = 3e-13
Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSL-PKRNRMDAYNIIK 219
KA A + + +G+ K V K RN F + PR P + K++ P + + Y II+
Sbjct: 4 KAQAAAQTLAQGQK-KEVTKTRNFTKFGKNAAQVVPRRPAFEHKAVKPVSLKHNDYKIIR 62
Query: 218 FPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYV 39
P+TS+ + KIE+ NT+ F V A K I AA +LY + KV T+I KKAY+
Sbjct: 63 GPVTSDKSTVKIENENTMTFWVDIKATKTEIAAAFNRLYKVKPVKVCTVITSKFVKKAYI 122
Query: 38 RLARDYDALDV 6
RL + +A+++
Sbjct: 123 RLPANVEAMNI 133
>UniRef50_UPI0000D65CF0 Cluster: PREDICTED: similar to hCG2001000;
n=1; Mus musculus|Rep: PREDICTED: similar to hCG2001000
- Mus musculus
Length = 137
Score = 74.9 bits (176), Expect = 2e-12
Identities = 52/133 (39%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
K L K +K + ++ R ++ F +PKT R P + +P+R+++ + I
Sbjct: 5 KPLLLPSKGLKSQESGAIK--RRALAFWQPKTLWLWRQPNTLSR-MPRRSQLKHHQI--- 58
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKK---LYDINVAKVNTLIRPDGKKKA 45
P + + ++ EDN T VF V ANK +K AVKK + DI +AKVNTLIRP+G+ K
Sbjct: 59 PPDNWVSQEETEDN-TSVFTVDVQANKSQMKEAVKKVNDICDIAMAKVNTLIRPNGENKM 117
Query: 44 YVRLARDYDALDV 6
YV LA DY+ LDV
Sbjct: 118 YVWLAPDYEPLDV 130
>UniRef50_UPI0000DD7E10 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L23a - Homo sapiens
Length = 87
Score = 72.1 bits (169), Expect = 2e-11
Identities = 34/49 (69%), Positives = 38/49 (77%)
Frame = -3
Query: 194 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 48
MKKIEDNNTLVF V A KH IK AVKKLYD +VAKV+ LIRPD ++
Sbjct: 1 MKKIEDNNTLVFTVDVKATKHQIKQAVKKLYDTDVAKVHALIRPDAGRR 49
>UniRef50_O26112 Cluster: 50S ribosomal protein L23P; n=2;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
50S ribosomal protein L23P - Methanobacterium
thermoautotrophicum
Length = 86
Score = 67.3 bits (157), Expect = 5e-10
Identities = 29/79 (36%), Positives = 50/79 (63%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 63
MD Y +I P +E +M I+ NN L F+V + K ++ A ++L+ + V +VNT + P
Sbjct: 1 MDPYAVIMKPHVTEKSMNLIDQNNELAFVVMRKSTKKDVRRAFEELFAVKVERVNTQVTP 60
Query: 62 DGKKKAYVRLARDYDALDV 6
G+K AY++LA+++ A D+
Sbjct: 61 RGQKIAYIKLAKEHSAEDI 79
>UniRef50_O28356 Cluster: 50S ribosomal protein L23P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L23P -
Archaeoglobus fulgidus
Length = 83
Score = 66.5 bits (155), Expect = 8e-10
Identities = 32/74 (43%), Positives = 49/74 (66%)
Frame = -3
Query: 227 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 48
+IK L +E ++ ++E N L IV A K HIK ++KL+++ V +VNTLI P G+KK
Sbjct: 4 LIKCFLVTEKSVAELE-KNVLTAIVDMRARKEHIKKEIEKLFNVEVERVNTLITPKGEKK 62
Query: 47 AYVRLARDYDALDV 6
AY++L DY A ++
Sbjct: 63 AYIKLKPDYSAEEI 76
>UniRef50_Q2NFV8 Cluster: 50S ribosomal protein L23P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L23P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 86
Score = 64.1 bits (149), Expect = 4e-09
Identities = 35/79 (44%), Positives = 43/79 (54%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 63
MD Y++I P SE M +I D N + F+V SANK IK A + LYD V VNT I P
Sbjct: 1 MDPYSVIIKPQLSEKTMNQIYDENKITFVVRRSANKRVIKEAFQDLYDTKVVGVNTHITP 60
Query: 62 DGKKKAYVRLARDYDALDV 6
G K A + L A D+
Sbjct: 61 RGNKVATIELEEADAAEDI 79
>UniRef50_P12732 Cluster: 50S ribosomal protein L23P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L23P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 85
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/77 (41%), Positives = 48/77 (62%)
Frame = -3
Query: 236 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDG 57
++++IK P +E AM ++ N L F V A+K + AV++ YD+ V +VNT DG
Sbjct: 2 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDG 61
Query: 56 KKKAYVRLARDYDALDV 6
+KKA VRL+ D DA +V
Sbjct: 62 EKKAVVRLSEDDDAQEV 78
>UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 109
Score = 61.3 bits (142), Expect = 3e-08
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = -3
Query: 392 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM 240
ALK ++ ++G H R RKI V FRRPKT++ R PKY RKS+PKR R+
Sbjct: 43 ALKTKKAALRGTHATRKRKIHTKVTFRRPKTYKAARVPKYTRKSIPKRPRL 93
>UniRef50_A3H7W7 Cluster: 50S ribosomal protein L23; n=1; Caldivirga
maquilingensis IC-167|Rep: 50S ribosomal protein L23 -
Caldivirga maquilingensis IC-167
Length = 86
Score = 60.9 bits (141), Expect = 4e-08
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = -3
Query: 227 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 48
I +F LT E A++ E NTL +V S NK IK V+K Y + V V TLI +G+KK
Sbjct: 7 ITRFVLT-EKAIRLAEKENTLTIVVPRSVNKKVIKDYVEKAYKVKVIDVRTLITMEGEKK 65
Query: 47 AYVRLARDYDALDV 6
AYVRL+ + +A+++
Sbjct: 66 AYVRLSSENNAIEL 79
>UniRef50_Q0W1Y7 Cluster: 50S ribosomal protein L23P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L23P -
Uncultured methanogenic archaeon RC-I
Length = 82
Score = 59.7 bits (138), Expect = 1e-07
Identities = 30/74 (40%), Positives = 45/74 (60%)
Frame = -3
Query: 227 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 48
IIK+P +E A ++ NNTL F+V A K IK A++++Y++ V KV T I G KK
Sbjct: 2 IIKYPFITEKATLSLDKNNTLQFMVDMRATKPQIKKAIEEMYNVKVVKVTTQITARGGKK 61
Query: 47 AYVRLARDYDALDV 6
A V L+ + A ++
Sbjct: 62 AVVTLSPENRAEEI 75
>UniRef50_Q673S7 Cluster: 50S ribosomal protein L23; n=2;
environmental samples|Rep: 50S ribosomal protein L23 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 96
Score = 56.8 bits (131), Expect = 7e-07
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAM--KKIED--------NNTLVFIVHTSANKHHIKAAVKKLYDIN 93
+D Y++IK P +E + +++ D NN + FIV K IKAAV++L D+
Sbjct: 2 IDPYSVIKMPWITEKTLEARRVSDKEGGYRENNNRIEFIVRRETTKADIKAAVEELLDVQ 61
Query: 92 VAKVNTLIRPDGKKKAYVRLARDYDALD 9
V KVNT I G K A VRLA YDA D
Sbjct: 62 VVKVNTRITITG-KHASVRLAEGYDAED 88
>UniRef50_Q2FU93 Cluster: 50S ribosomal protein L23P; n=1;
Methanospirillum hungatei JF-1|Rep: 50S ribosomal
protein L23P - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 82
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/74 (36%), Positives = 43/74 (58%)
Frame = -3
Query: 227 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 48
I+K+P +E A +E + L FIV A+K IK A++K++D V +V TL+ G+KK
Sbjct: 2 ILKYPYATEKASMIVERDGQLQFIVDRKASKGQIKVAIEKMFDQPVTRVRTLMNNRGEKK 61
Query: 47 AYVRLARDYDALDV 6
A V + A ++
Sbjct: 62 AMVSFSNPKAAEEI 75
>UniRef50_Q6L1C5 Cluster: 50S ribosomal protein L23P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L23P -
Picrophilus torridus
Length = 82
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/70 (38%), Positives = 42/70 (60%)
Frame = -3
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 36
P+ +E +E N + F+V+ A K IK V+ +++ VAKVN +I +G KKA V
Sbjct: 7 PIVTEKTTLMMEKENKITFLVNRKATKEAIKNEVEARFNVKVAKVNMMIAKNG-KKAIVT 65
Query: 35 LARDYDALDV 6
LA+D+ A +V
Sbjct: 66 LAKDFSAEEV 75
>UniRef50_Q5FTY5 Cluster: 50S ribosomal protein L23; n=58;
Proteobacteria|Rep: 50S ribosomal protein L23 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 107
Score = 50.8 bits (116), Expect = 4e-05
Identities = 28/72 (38%), Positives = 43/72 (59%)
Frame = -3
Query: 233 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 54
Y++++ PL +E A + + N +VF V SA K IKAAV+KL+++ V VNTL++
Sbjct: 16 YDVVRAPLITEKATL-LSERNQVVFKVAPSATKPQIKAAVEKLFNVKVTGVNTLVQKGKV 74
Query: 53 KKAYVRLARDYD 18
K+ R R D
Sbjct: 75 KRVKGRPGRRSD 86
>UniRef50_Q748Z1 Cluster: 50S ribosomal protein L23; n=11;
Bacteria|Rep: 50S ribosomal protein L23 - Geobacter
sulfurreducens
Length = 94
Score = 50.8 bits (116), Expect = 4e-05
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 63
M+ Y++IK PL +E + + N + F V ANK IK AV+KL+ + VA+VNT +
Sbjct: 1 MNLYDVIKKPLITEKTTIEKDSKNVVSFEVDRDANKIEIKEAVEKLFKVEVAEVNT-VNV 59
Query: 62 DGKKKAYVR 36
GK K + R
Sbjct: 60 AGKVKRFGR 68
>UniRef50_Q6N4T7 Cluster: 50S ribosomal protein L23; n=12;
Proteobacteria|Rep: 50S ribosomal protein L23 -
Rhodopseudomonas palustris
Length = 99
Score = 50.4 bits (115), Expect = 6e-05
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = -3
Query: 233 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 54
Y++I P+ +E + E +N +VF V A K IK AV+KL+D+ V VNTL+R GK
Sbjct: 9 YDVIVAPVVTEKSTMASE-HNKVVFKVQGGATKPQIKEAVEKLFDVKVKSVNTLVR-KGK 66
Query: 53 KKAY 42
KA+
Sbjct: 67 TKAF 70
>UniRef50_P0ADZ3 Cluster: 50S ribosomal protein L23; n=59;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Shigella flexneri
Length = 100
Score = 49.6 bits (113), Expect = 1e-04
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = -3
Query: 227 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 48
+++ P SE A +E +NT+V V A K IKAAV+KL+++ V VNTL+ K+
Sbjct: 10 VLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKR 69
Query: 47 AYVRLARDYD 18
R+ R D
Sbjct: 70 HGQRIGRRSD 79
>UniRef50_Q8XHS5 Cluster: 50S ribosomal protein L23; n=14;
Clostridia|Rep: 50S ribosomal protein L23 - Clostridium
perfringens
Length = 97
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/66 (37%), Positives = 45/66 (68%)
Frame = -3
Query: 245 RMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR 66
++ +++II+ P+ +E +M + +N FIVH +ANK IK AV++++++ VA V T+ R
Sbjct: 2 KLTSHDIIRKPVITEKSMAAMAENK-YTFIVHMAANKVQIKRAVEEVFNVKVADVKTM-R 59
Query: 65 PDGKKK 48
+GK K
Sbjct: 60 FEGKTK 65
>UniRef50_A0T0X4 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Thalassiosira pseudonana|Rep: Chloroplast 50S
ribosomal protein L23 - Thalassiosira pseudonana (Marine
diatom)
Length = 98
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = -3
Query: 248 NRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 69
N +D N+IK+P+ ++ A + + NN FIV ++K IKAA++ L+++ V K+NT
Sbjct: 3 NSLDM-NVIKYPIITDKATRLLA-NNQYSFIVSPKSDKPTIKAAIEYLFNVKVVKINTAH 60
Query: 68 RPDGKKK 48
P KK+
Sbjct: 61 LPKKKKR 67
>UniRef50_A7I5P1 Cluster: Ribosomal protein L25/L23; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein L25/L23
- Methanoregula boonei (strain 6A8)
Length = 83
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = -3
Query: 224 IKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 45
+K P +E AM +E+ + L F+V A K IK ++K +D V V+TL+ G+KKA
Sbjct: 4 LKHPFVTEKAMVLLENESKLQFLVDRKATKQDIKREIEKAFDQKVKSVHTLMSMHGEKKA 63
Query: 44 YV 39
V
Sbjct: 64 VV 65
>UniRef50_Q15YN7 Cluster: 50S ribosomal protein L23; n=8;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 100
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/62 (43%), Positives = 36/62 (58%)
Frame = -3
Query: 227 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 48
++ P SE A E NNT+VF V ANK IKAAV+KL+++ V V T + GK K
Sbjct: 10 VVLAPHVSEKATLAAEVNNTVVFKVLKDANKEEIKAAVEKLFEVEVNSVRT-VNVKGKTK 68
Query: 47 AY 42
+
Sbjct: 69 RH 70
>UniRef50_O66433 Cluster: 50S ribosomal protein L23; n=10;
Bacteria|Rep: 50S ribosomal protein L23 - Aquifex
aeolicus
Length = 103
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = -3
Query: 233 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 54
+ II P+ +E + + +ED N F V A+K IK AV+KL+++ V KVNT+I K
Sbjct: 7 WEIIIRPIITEKSNRLMEDYNKYTFEVALDASKPEIKYAVEKLFNVKVKKVNTMIVKPKK 66
Query: 53 KKAY 42
K+ +
Sbjct: 67 KRVW 70
>UniRef50_A6DPN6 Cluster: 50S ribosomal protein L23; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L23 - Lentisphaera araneosa HTCC2155
Length = 93
Score = 48.0 bits (109), Expect = 3e-04
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 63
M Y +IK + +E + +ED N F V +SANK I AV+K++++ V VNT+
Sbjct: 1 MSNYKVIKTVVLTEKSSAAMEDQNKYTFKVASSANKIEIANAVQKIFNVKVQSVNTM-NY 59
Query: 62 DGKKK 48
GKKK
Sbjct: 60 TGKKK 64
>UniRef50_Q7VKD4 Cluster: 50S ribosomal protein L23; n=27;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Haemophilus ducreyi
Length = 101
Score = 47.6 bits (108), Expect = 4e-04
Identities = 25/70 (35%), Positives = 38/70 (54%)
Frame = -3
Query: 227 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 48
++K P SE A K E NT+VF V ANK + AV++L+++ V V T++ K+
Sbjct: 10 VLKAPHISEKATKNAEKGNTIVFKVALDANKVEVANAVQELFEVKVDSVRTVVVKGKTKR 69
Query: 47 AYVRLARDYD 18
R+ R D
Sbjct: 70 HGARMGRRSD 79
>UniRef50_Q6B8V5 Cluster: Chloroplast 50S ribosomal protein L23;
n=2; Eukaryota|Rep: Chloroplast 50S ribosomal protein
L23 - Gracilaria tenuistipitata var. liui (Red alga)
Length = 103
Score = 47.6 bits (108), Expect = 4e-04
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = -3
Query: 230 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 51
+IIK+P+ ++ + IE+N F V A K IK A+++L+D+ V ++NTLI KK
Sbjct: 14 DIIKYPILTDKTTQMIEENK-YSFAVEVKAKKPKIKEAIEQLFDVKVQQINTLIVKPQKK 72
Query: 50 K 48
+
Sbjct: 73 R 73
>UniRef50_Q02W26 Cluster: 50S ribosomal protein L23; n=7;
Bacilli|Rep: 50S ribosomal protein L23 - Lactococcus
lactis subsp. cremoris (strain SK11)
Length = 97
Score = 46.8 bits (106), Expect = 7e-04
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IR 66
M Y+II+ P+ +EA+M + D F V + A+K IK AV+ ++D+ VA VNT+ ++
Sbjct: 1 MSLYDIIRKPIITEASMAAM-DQKKYTFEVDSRAHKLLIKQAVEAVFDVKVASVNTISVK 59
Query: 65 PDGKK 51
P K+
Sbjct: 60 PKSKR 64
>UniRef50_Q1Q136 Cluster: Strongly similar to 50S ribosomal protein
L23; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Strongly similar to 50S ribosomal protein L23 -
Candidatus Kuenenia stuttgartiensis
Length = 93
Score = 46.4 bits (105), Expect = 0.001
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 63
MD Y++IK PL +E ++ E N+ F V ANK IK A++ ++ + V V TLI+
Sbjct: 1 MDKYDVIKGPLRTEKSVSDGEKTNSYHFDVDLKANKIQIKNAIEGIFGVKVNGVRTLIKK 60
Query: 62 DGKKK 48
+++
Sbjct: 61 SKRRR 65
>UniRef50_A3CSZ9 Cluster: 50S ribosomal protein L23; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L23 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 82
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/66 (36%), Positives = 35/66 (53%)
Frame = -3
Query: 227 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 48
I+K P +E A +E + L FIV A K IK ++ ++ VA V T++ G+KK
Sbjct: 2 ILKHPFVTEKATMMLEGESKLQFIVQRDATKQDIKRELESAFEQEVANVRTMMTMKGEKK 61
Query: 47 AYVRLA 30
A V A
Sbjct: 62 AIVTFA 67
>UniRef50_Q8PV48 Cluster: 50S ribosomal protein L23P; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L23P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 82
Score = 45.6 bits (103), Expect = 0.002
Identities = 26/60 (43%), Positives = 32/60 (53%)
Frame = -3
Query: 224 IKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 45
I +P +E AM + D N L FIV T +NK I V+KLY V V T+ G KKA
Sbjct: 4 INYPFVTEKAMMLL-DENKLQFIVDTRSNKKQIVEDVEKLYGFKVKAVRTMTTMKGTKKA 62
>UniRef50_Q6YR18 Cluster: 50S ribosomal protein L23; n=3; Candidatus
Phytoplasma|Rep: 50S ribosomal protein L23 - Onion
yellows phytoplasma
Length = 96
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = -3
Query: 233 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRPDG 57
Y+++K P+ +E K IE N F V +ANK IK A++ ++ + V VNT + P
Sbjct: 5 YDLVKAPIITELTNKLIERQNKYTFKVAKTANKVEIKKALESIFQVKVLSVNTRNVLPQF 64
Query: 56 KKK 48
K+K
Sbjct: 65 KRK 67
>UniRef50_Q1VGG2 Cluster: 50S ribosomal protein L23; n=1;
Psychroflexus torquis ATCC 700755|Rep: 50S ribosomal
protein L23 - Psychroflexus torquis ATCC 700755
Length = 63
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 63
M+AY+II P +E +M+ L FIV SA+K I AV+ ++D+ V KVN
Sbjct: 1 MNAYDIIIQPWLTEKSMEARSTQQRLEFIVRRSASKDDIAKAVETIFDVEVEKVNVRNSK 60
Query: 62 DGK 54
GK
Sbjct: 61 HGK 63
>UniRef50_Q6SG46 Cluster: 50S ribosomal protein L23; n=3;
Bacteria|Rep: 50S ribosomal protein L23 - uncultured
bacterium 562
Length = 98
Score = 44.8 bits (101), Expect = 0.003
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = -3
Query: 233 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 54
+ +IK P+ +E + + E +VF V +ANK IK AV++L+ + V KV T I GK
Sbjct: 7 FTLIKSPIVTEKSARVGESLKQIVFKVDLTANKREIKKAVEELFKVEVTKVTTSI-VKGK 65
Query: 53 KK 48
+K
Sbjct: 66 RK 67
>UniRef50_A6NXD1 Cluster: 50S ribosomal protein L23; n=1;
Bacteroides capillosus ATCC 29799|Rep: 50S ribosomal
protein L23 - Bacteroides capillosus ATCC 29799
Length = 99
Score = 44.4 bits (100), Expect = 0.004
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = -3
Query: 236 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDG 57
AY+IIK P+ +E +M+ E F V SANK I AV++++ + V KVNTL G
Sbjct: 5 AYDIIKRPVITEQSMEMTEMKR-YTFEVAKSANKIEIAKAVEEIFGVKVVKVNTL-NMQG 62
Query: 56 KKK 48
K+K
Sbjct: 63 KEK 65
>UniRef50_Q4G363 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Emiliania huxleyi|Rep: Chloroplast 50S ribosomal
protein L23 - Emiliania huxleyi
Length = 99
Score = 44.4 bits (100), Expect = 0.004
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = -3
Query: 230 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 51
++IK+P+ +E + IE N F V A+K IK+AV+ L+D+ V VNT +P K+
Sbjct: 10 DLIKYPILTEKTSRLIEQNQ-YSFAVDRKADKISIKSAVEALFDVQVVAVNTANQPLKKR 68
Query: 50 K 48
+
Sbjct: 69 R 69
>UniRef50_A1Y9U8 Cluster: 50S ribosomal protein L23; n=7;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Flavobacterium hibernum
Length = 96
Score = 44.0 bits (99), Expect = 0.005
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -3
Query: 230 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRPDGK 54
+II P+ +E K+ E N F+V ANK IK AV+ Y + + VNT+ +RPD
Sbjct: 2 SIIIRPIVTEKVTKESEVLNRFGFVVDKKANKVQIKKAVEAAYGVTIVSVNTMNVRPDRT 61
Query: 53 KK 48
K
Sbjct: 62 TK 63
>UniRef50_Q6A6M8 Cluster: 50S ribosomal protein L23; n=36;
Bacteria|Rep: 50S ribosomal protein L23 -
Propionibacterium acnes
Length = 102
Score = 44.0 bits (99), Expect = 0.005
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = -3
Query: 239 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR 66
D +II P+ SE + + D NT F+V +ANK IK A+++++ + V VNT+ R
Sbjct: 8 DPRDIILAPVVSEKSYGLL-DQNTYTFVVKPTANKTEIKIAIEQIFGVKVTSVNTMNR 64
>UniRef50_A5TVD5 Cluster: 50S ribosomal protein L23; n=3;
Fusobacterium nucleatum|Rep: 50S ribosomal protein L23 -
Fusobacterium nucleatum subsp. polymorphum ATCC 10953
Length = 95
Score = 43.6 bits (98), Expect = 0.007
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 63
M+ Y+IIK P+ +E ++ N F VH ANK IK A++ ++++ V V T+ +
Sbjct: 1 MNVYDIIKKPVVTEKTELLRKEYNKYTFEVHPKANKIEIKKAIETIFNVKVEDVATINKK 60
Query: 62 DGKKKAYVRL 33
K+ +RL
Sbjct: 61 PITKRHGMRL 70
>UniRef50_P38512 Cluster: 50S ribosomal protein L23; n=7;
Bacteria|Rep: 50S ribosomal protein L23 - Thermotoga
maritima
Length = 100
Score = 43.6 bits (98), Expect = 0.007
Identities = 22/70 (31%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Frame = -3
Query: 254 KRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 75
K+ ++ ++++ P+ +E A+ + + VF V+ ANK+ +K AV+KL+++ V KVN
Sbjct: 2 KQEKLSLHDVLIRPIITEKALI-LREQRKYVFEVNPLANKNLVKEAVEKLFNVKVEKVNI 60
Query: 74 L-IRPDGKKK 48
L ++P K++
Sbjct: 61 LNMKPKPKRR 70
>UniRef50_A6BIQ4 Cluster: 50S ribosomal protein L23; n=23;
Firmicutes|Rep: 50S ribosomal protein L23 - Dorea
longicatena DSM 13814
Length = 101
Score = 43.2 bits (97), Expect = 0.009
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = -3
Query: 233 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLY-DINVAKVNTLIRPDG 57
Y++I P+ +E +M+ + + F+VH A K IK AV+K++ V KVNT+ DG
Sbjct: 7 YDVILKPVVTEKSMELMGEKK-YTFLVHPEATKSQIKEAVEKMFTGTKVEKVNTM-NNDG 64
Query: 56 KKK 48
KKK
Sbjct: 65 KKK 67
>UniRef50_Q5BHZ4 Cluster: GM06171p; n=1; Drosophila
melanogaster|Rep: GM06171p - Drosophila melanogaster
(Fruit fly)
Length = 290
Score = 43.2 bits (97), Expect = 0.009
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = -2
Query: 276 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGLYCSHKCKQAPYQGCSQETL*Y 97
+P+E+ A ++ HG +QHH +P+ +EED QH GL + +Q P S + L +
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLPHTPARQQEPRACRSAQALRH 222
Query: 96 KCC*SQHTHQA*W*EESV 43
+ + H A W EE +
Sbjct: 223 QGGQGERAHPARWPEEGL 240
>UniRef50_P94269 Cluster: 50S ribosomal protein L23; n=3; Borrelia
burgdorferi group|Rep: 50S ribosomal protein L23 -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 103
Score = 43.2 bits (97), Expect = 0.009
Identities = 27/75 (36%), Positives = 41/75 (54%)
Frame = -3
Query: 251 RNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 72
R M AY+II P+ +E + E N VF V+ ANK + AA+K+L+++ N L
Sbjct: 3 RISMKAYDIIVSPMLTEKTNTQRESINVYVFKVNKRANKKEVGAAIKELFNVTPVSCNLL 62
Query: 71 IRPDGKKKAYVRLAR 27
+ K KA V ++R
Sbjct: 63 ---NIKSKAKVVVSR 74
>UniRef50_Q06SH7 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Stigeoclonium helveticum|Rep: Chloroplast 50S
ribosomal protein L23 - Stigeoclonium helveticum (Green
alga)
Length = 118
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/70 (30%), Positives = 40/70 (57%)
Frame = -3
Query: 230 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 51
++IK+P+ + + + + NN +F V K IK +++ +++NV VNT RP KK
Sbjct: 3 DLIKYPVINFKSYRALVLNNQYMFNVDLRLTKPQIKKLIEQYFEVNVISVNT-HRPPRKK 61
Query: 50 KAYVRLARDY 21
+ Y++ + Y
Sbjct: 62 RLYIQTSPGY 71
>UniRef50_A7DSZ2 Cluster: Ribosomal protein L25/L23; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L25/L23 - Candidatus Nitrosopumilus maritimus SCM1
Length = 88
Score = 42.3 bits (95), Expect = 0.016
Identities = 28/77 (36%), Positives = 38/77 (49%)
Frame = -3
Query: 236 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDG 57
A II P +E +E+ + + FIV SA+K I AV LY+ V VNT R
Sbjct: 6 ASKIILKPYITEKTFAMVENESKICFIVERSASKPEISEAVNTLYNEKVLNVNT-ARTIY 64
Query: 56 KKKAYVRLARDYDALDV 6
KKA+V+ A D+
Sbjct: 65 GKKAFVQFENTEKARDL 81
>UniRef50_Q74N77 Cluster: 50S ribosomal protein L23P; n=3; cellular
organisms|Rep: 50S ribosomal protein L23P - Nanoarchaeum
equitans
Length = 78
Score = 42.3 bits (95), Expect = 0.016
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = -3
Query: 212 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 33
L +E A++ +E NT+ +V K IK +K V KVNTLI G KKAYVR
Sbjct: 4 LQTEKALRLLEQYNTITILVPREYTKSKIKEFFEKK-GYKVKKVNTLITKKGLKKAYVRF 62
Query: 32 ARD 24
+
Sbjct: 63 KEE 65
>UniRef50_Q6KI53 Cluster: 50S ribosomal protein L23; n=1; Mycoplasma
mobile|Rep: 50S ribosomal protein L23 - Mycoplasma
mobile
Length = 213
Score = 42.3 bits (95), Expect = 0.016
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 63
M+ IIK+PL +E + K + N VF V A K IK A++ ++++ V K+N P
Sbjct: 1 MNHNEIIKYPLLTEKSYKTMA-QNVYVFAVDRRARKIEIKDAIEFIFEVKVEKINLFNVP 59
Query: 62 DGKKK 48
+KK
Sbjct: 60 QKEKK 64
>UniRef50_P75578 Cluster: 50S ribosomal protein L23; n=2;
Mycoplasma|Rep: 50S ribosomal protein L23 - Mycoplasma
pneumoniae
Length = 237
Score = 41.9 bits (94), Expect = 0.021
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -3
Query: 242 MDAYNIIKFP-LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR 66
MD N++ P LT + ++ + VF+V+ A+K +K A + +Y I KVNTLIR
Sbjct: 1 MDVTNVLLKPVLTEKVYFNQMGETKKYVFVVNPKASKTRVKLAFELVYGIKPLKVNTLIR 60
>UniRef50_Q97EI0 Cluster: 50S ribosomal protein L23; n=26;
Firmicutes|Rep: 50S ribosomal protein L23 - Clostridium
acetobutylicum
Length = 98
Score = 41.5 bits (93), Expect = 0.027
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = -3
Query: 239 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 75
++++II+ P+ +E +M ++ D FIV ANK IK A+++++ + V KVNT
Sbjct: 4 NSHDIIRKPVITEKSMAEMADKK-YTFIVDPHANKVQIKKAIEEVFGVKVEKVNT 57
>UniRef50_Q5GSU6 Cluster: 50S ribosomal protein L23; n=2;
Wolbachia|Rep: 50S ribosomal protein L23 - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 95
Score = 41.5 bits (93), Expect = 0.027
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = -3
Query: 230 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRP 63
NI+K P+ +E A E N V + NKH IK+A++ L+++ V+ +N + ++P
Sbjct: 6 NIVKCPIITEKASFLREKFNKYSLYVFVNVNKHKIKSAIESLFNVKVSSINVVRVKP 62
>UniRef50_Q9RA57 Cluster: 50S ribosomal protein L23; n=14;
Bacteria|Rep: 50S ribosomal protein L23 - Thermus
thermophilus
Length = 96
Score = 41.5 bits (93), Expect = 0.027
Identities = 26/63 (41%), Positives = 33/63 (52%)
Frame = -3
Query: 236 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDG 57
AY++I P+ SE A + F VH A K IK AV+ + + V KVNTL G
Sbjct: 4 AYDVILAPVLSEKAYAGFAEGK-YTFWVHPKATKTEIKNAVETAFKVKVVKVNTL-HVRG 61
Query: 56 KKK 48
KKK
Sbjct: 62 KKK 64
>UniRef50_Q5LLU8 Cluster: 50S ribosomal protein L23; n=55;
Alphaproteobacteria|Rep: 50S ribosomal protein L23 -
Silicibacter pomeroyi
Length = 98
Score = 41.1 bits (92), Expect = 0.036
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = -3
Query: 233 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 54
Y++I+ P+ +E + E N +VF V +NK IK AV+ L+ + V VNT I GK
Sbjct: 8 YDVIRKPIITEKSTMASE-NGAVVFEVSIDSNKPQIKEAVESLFGVKVKAVNTTI-TKGK 65
Query: 53 KKAY 42
K +
Sbjct: 66 VKRF 69
>UniRef50_Q7NPG8 Cluster: 50S ribosomal protein L23; n=7; cellular
organisms|Rep: 50S ribosomal protein L23 - Gloeobacter
violaceus
Length = 100
Score = 41.1 bits (92), Expect = 0.036
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = -3
Query: 230 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 51
+II+ PL +E + +E+N L F V ANK I A+++L+ + V KVNT P ++
Sbjct: 11 DIIRRPLITEKGTRLLEENKYL-FEVTPGANKIQIAQAIEELFSVKVTKVNTFNPPARQR 69
Query: 50 K 48
+
Sbjct: 70 R 70
>UniRef50_Q1UZG5 Cluster: 50S ribosomal protein L23; n=2; Candidatus
Pelagibacter ubique|Rep: 50S ribosomal protein L23 -
Candidatus Pelagibacter ubique HTCC1002
Length = 97
Score = 40.7 bits (91), Expect = 0.047
Identities = 19/68 (27%), Positives = 40/68 (58%)
Frame = -3
Query: 248 NRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 69
+++ Y+ I P+ +E + + N +VF V +ANK ++K ++K++ +NV K+N +
Sbjct: 2 DKIHLYDKILSPMVTEKTTN-LSEQNKIVFKVPRAANKTNLKKNIEKIFKVNVTKINIIN 60
Query: 68 RPDGKKKA 45
+ + K A
Sbjct: 61 KQNRTKVA 68
>UniRef50_Q7V9W4 Cluster: 50S ribosomal protein L23; n=32; cellular
organisms|Rep: 50S ribosomal protein L23 -
Prochlorococcus marinus
Length = 102
Score = 40.3 bits (90), Expect = 0.063
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = -3
Query: 230 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 63
++I+ PL +E A K + D N F V A K IKAAV+KL+D+ V ++T+ P
Sbjct: 11 DVIRRPLITEKATKGL-DINQYTFEVDHRAAKPDIKAAVEKLFDVKVIGISTMNPP 65
>UniRef50_Q6AP69 Cluster: 50S ribosomal protein L23; n=2;
Deltaproteobacteria|Rep: 50S ribosomal protein L23 -
Desulfotalea psychrophila
Length = 95
Score = 40.3 bits (90), Expect = 0.063
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = -3
Query: 233 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 75
Y ++K P+ +E A E + +VF VH +NK IK A++ ++D+ V V T
Sbjct: 5 YGVLKGPVLTEKAAILQEIDGQVVFKVHPKSNKIEIKRAIELMFDVKVKDVRT 57
>UniRef50_Q9L0D8 Cluster: 50S ribosomal protein L23; n=16;
Actinomycetales|Rep: 50S ribosomal protein L23 -
Streptomyces coelicolor
Length = 139
Score = 39.9 bits (89), Expect = 0.083
Identities = 22/64 (34%), Positives = 36/64 (56%)
Frame = -3
Query: 239 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPD 60
D +++ P+ SE + + D N F+V +NK IK AV+ ++ + V VNT+ R
Sbjct: 45 DPRDVLLKPVVSEKSYALL-DENKYTFVVAPGSNKTQIKEAVQAVFSVKVTGVNTINR-Q 102
Query: 59 GKKK 48
GK+K
Sbjct: 103 GKRK 106
>UniRef50_A5CCL0 Cluster: 50S ribosomal protein L23; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L23 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 98
Score = 39.9 bits (89), Expect = 0.083
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = -3
Query: 233 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 54
Y++I P+ +E + E +F+V +ANK++I A++ ++++NV KVN +I GK
Sbjct: 6 YDLIVKPVVTEKSTLASECKK-YIFLVQRNANKYNISKAIEGIFNVNVIKVN-IINMIGK 63
Query: 53 KKAY 42
K +
Sbjct: 64 TKRF 67
>UniRef50_Q14JB8 Cluster: 50S ribosomal protein L23; n=8;
Francisella tularensis|Rep: 50S ribosomal protein L23 -
Francisella tularensis subsp. tularensis (strain FSC
198)
Length = 99
Score = 39.9 bits (89), Expect = 0.083
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Frame = -3
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-----IRPDGK- 54
P S+ + N+T+VF V ANK +K AV+KL+++ V VN L R G+
Sbjct: 14 PHVSDKTYGLSDANSTIVFEVARFANKQDVKNAVEKLFEVKVESVNILNVKGKARRFGRV 73
Query: 53 -------KKAYVRLARDYD 18
KKAYV+LA +D
Sbjct: 74 EGGTKAWKKAYVKLAEGHD 92
>UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 255
Score = 39.5 bits (88), Expect = 0.11
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = +1
Query: 196 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 336
A S V NLM+ S FLLG F GYLGCL +VLG RK L +
Sbjct: 166 AYSVVSRNLMIARWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 212
>UniRef50_Q0EW38 Cluster: 50S ribosomal protein L23; n=1;
Mariprofundus ferrooxydans PV-1|Rep: 50S ribosomal
protein L23 - Mariprofundus ferrooxydans PV-1
Length = 99
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = -3
Query: 233 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 54
+NI++ P+ +E + N F V A+K +KAA++ ++++NV KV + P
Sbjct: 8 FNILRQPVITEKSYTATGAANQYTFRVAREASKAQVKAAIEAIFEVNVDKVQVINMPSKP 67
Query: 53 KK 48
K+
Sbjct: 68 KR 69
>UniRef50_Q553D8 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 120
Score = 39.1 bits (87), Expect = 0.14
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -3
Query: 191 KKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 72
K E+ N ++F S K IK +K LYD+NV KVNT+
Sbjct: 33 KTFENTNKIMFKTDCSVGKTDIKTYMKALYDVNVDKVNTI 72
>UniRef50_A5KRQ3 Cluster: 50S ribosomal protein L23; n=1; candidate
division TM7 genomosp. GTL1|Rep: 50S ribosomal protein
L23 - candidate division TM7 genomosp. GTL1
Length = 102
Score = 38.7 bits (86), Expect = 0.19
Identities = 21/49 (42%), Positives = 24/49 (48%)
Frame = -3
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 69
P SE A NT VF+V NK I AV Y + VAKV TL+
Sbjct: 8 PRVSEKAYGLASVGNTYVFVVPIKVNKQQIADAVATQYGVKVAKVTTLV 56
>UniRef50_Q8A478 Cluster: 50S ribosomal protein L23; n=11;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Bacteroides thetaiotaomicron
Length = 96
Score = 38.3 bits (85), Expect = 0.25
Identities = 24/61 (39%), Positives = 33/61 (54%)
Frame = -3
Query: 227 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 48
IIK PL +E + N F+V ANK IK V+ LY++ V VNT ++ GK K
Sbjct: 4 IIK-PLVTEKMTAITDKLNRFGFVVRPDANKLEIKKEVEALYNVTVVDVNT-VKYAGKNK 61
Query: 47 A 45
+
Sbjct: 62 S 62
>UniRef50_Q1VLV7 Cluster: 50S ribosomal protein L23; n=2;
Flavobacteriaceae|Rep: 50S ribosomal protein L23 -
Psychroflexus torquis ATCC 700755
Length = 106
Score = 37.9 bits (84), Expect = 0.33
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = -3
Query: 227 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 72
IIK LT + A+ + E N FIV +ANK IK+AV+ ++++V+KV T+
Sbjct: 6 IIKPILTEKMAIMQ-ERQNKYAFIVSHNANKIQIKSAVENKFNVSVSKVATM 56
>UniRef50_Q7MTL5 Cluster: 50S ribosomal protein L23; n=8;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 97
Score = 37.1 bits (82), Expect = 0.58
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = -3
Query: 227 IIKFPLTSEAAMKKIED-NNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 51
IIK P+ SE E + F V +ANK IK AV+ +Y++ V VNT+ R DGK+
Sbjct: 4 IIK-PIISEKMTAVTEKMSERYGFRVSPNANKIEIKKAVEAMYNVKVEDVNTM-RYDGKR 61
Query: 50 K 48
K
Sbjct: 62 K 62
>UniRef50_Q4A5C3 Cluster: 50S ribosomal protein L23; n=1; Mycoplasma
synoviae 53|Rep: 50S ribosomal protein L23 - Mycoplasma
synoviae (strain 53)
Length = 158
Score = 37.1 bits (82), Expect = 0.58
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 63
M+ +I+ P+ +E + + D F V ANKH IK AV+ ++ + V VNT I+
Sbjct: 1 MELTRVIQAPIITEKTDRLLLDRK-YTFKVDYFANKHQIKQAVETIFKVEVVDVNT-IKV 58
Query: 62 DGKKKAYVRLA 30
K K R A
Sbjct: 59 GKKPKKLGRFA 69
>UniRef50_Q82X86 Cluster: 50S ribosomal protein L23; n=5;
Betaproteobacteria|Rep: 50S ribosomal protein L23 -
Nitrosomonas europaea
Length = 111
Score = 36.7 bits (81), Expect = 0.77
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = -3
Query: 236 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLY---DINVAKVNTLIR 66
A +IK P SE + E ++F V ANK IK+A+++++ +I V V ++
Sbjct: 11 ALEVIKAPQISEKSTFIAEKTKQIIFYVSRDANKTEIKSAIEQIWRSQNIQVKSVQ-VVN 69
Query: 65 PDGKKKAYVR 36
GKKK + R
Sbjct: 70 VKGKKKRFGR 79
>UniRef50_Q7VQE6 Cluster: 50S ribosomal protein L23; n=1; Candidatus
Blochmannia floridanus|Rep: 50S ribosomal protein L23 -
Blochmannia floridanus
Length = 99
Score = 36.7 bits (81), Expect = 0.77
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -3
Query: 227 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 48
+IK P SE + ++ NN +V V K I+ AV L+ + + K+N L+ GK K
Sbjct: 9 VIKAPHVSEKSSIALDKNNVIVLKVVNYVTKQDIRHAVCMLFSVKIKKINVLM-VSGKSK 67
>UniRef50_P06390 Cluster: Chloroplast 50S ribosomal protein L23;
n=13; Viridiplantae|Rep: Chloroplast 50S ribosomal
protein L23 - Marchantia polymorpha (Liverwort)
Length = 91
Score = 36.7 bits (81), Expect = 0.77
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = -3
Query: 230 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 51
N +K+P+ +E ++ +E N F V+ +NK IK ++ +++ V VN+ P KK
Sbjct: 2 NQVKYPVLTEKTIRLLEKNQ-YSFDVNIDSNKTQIKKWIELFFNVKVISVNSHRLPKKKK 60
Query: 50 K 48
K
Sbjct: 61 K 61
>UniRef50_Q8EUB5 Cluster: 50S ribosomal protein L23; n=1; Mycoplasma
penetrans|Rep: 50S ribosomal protein L23 - Mycoplasma
penetrans
Length = 138
Score = 35.9 bits (79), Expect = 1.4
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMK-KIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR 66
MD ++I PL SE + + ED VF V+ +ANK+ I A + +Y I KVN + R
Sbjct: 1 MDLLSVIIKPLHSEKSYSLRNEDIKKYVFEVNRNANKYEISLAFQLIYGIVPNKVNVVNR 60
>UniRef50_Q81VS8 Cluster: 50S ribosomal protein L23; n=56;
Firmicutes|Rep: 50S ribosomal protein L23 - Bacillus
anthracis
Length = 96
Score = 35.5 bits (78), Expect = 1.8
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = -3
Query: 239 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRP 63
D +IIK P+ +E +M+ + + F V +NK +K A++ ++ + V KVN + +P
Sbjct: 3 DPRDIIKRPVITERSMEMMAEKK-YTFDVDVKSNKTEVKDALEAIFGVKVEKVNIMNYKP 61
Query: 62 DGKK 51
K+
Sbjct: 62 KAKR 65
>UniRef50_Q9PQQ8 Cluster: 50S ribosomal protein L23; n=1; Ureaplasma
parvum|Rep: 50S ribosomal protein L23 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 105
Score = 35.1 bits (77), Expect = 2.4
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEA--AMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 69
M+ +I P T+E +++ ++ TL FIV +ANK+ I+ A ++ + K+ T
Sbjct: 1 MELTRVILHPYTTEKTYSIRNKSEHETLTFIVDKNANKYQIREAFIAIFGLKPLKIRTTN 60
Query: 68 RPDGK 54
R K
Sbjct: 61 RRPAK 65
>UniRef50_Q4N6P3 Cluster: Ribosomal protein L223, putative; n=2;
Theileria|Rep: Ribosomal protein L223, putative -
Theileria parva
Length = 252
Score = 35.1 bits (77), Expect = 2.4
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 179 DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR-PDGKKKAYVRLARDY 21
+ N L V + K I+ ++KLYD V KVNTLI+ P K+ RL + Y
Sbjct: 34 ERNRLALRVPINLTKFEIREYLRKLYDAKVIKVNTLIKIPRIKRDFSSRLPKYY 87
>UniRef50_Q2LQ99 Cluster: 50S ribosomal protein L23; n=4;
Bacteria|Rep: 50S ribosomal protein L23 - Syntrophus
aciditrophicus (strain SB)
Length = 96
Score = 35.1 bits (77), Expect = 2.4
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = -3
Query: 239 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPD 60
+ + I+K L +E + + ++ N F V ANK I+ AV++L + V V+ +I
Sbjct: 3 ELHQIVKRMLVTEKSTLEKDEKNKYYFEVDRRANKIEIRKAVERLLKVTVDDVH-VINIK 61
Query: 59 GKKKAYVRL 33
GKKK R+
Sbjct: 62 GKKKRTGRI 70
>UniRef50_O52334 Cluster: 50S ribosomal protein L23; n=2; Mycoplasma
gallisepticum|Rep: 50S ribosomal protein L23 -
Mycoplasma gallisepticum
Length = 108
Score = 35.1 bits (77), Expect = 2.4
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = -3
Query: 227 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 48
+IK LT + + + F+V+ ANK++IK A K +Y + VNT I KK
Sbjct: 7 LIKPILTEKTYGIMMSEPRKYTFLVNAKANKNYIKQAFKAIYGVTPIAVNTKI----KKP 62
Query: 47 AYVR 36
A VR
Sbjct: 63 ARVR 66
>UniRef50_Q1KVT6 Cluster: Chloroplast 50S ribosomal protein L23;
n=2; Scenedesmus obliquus|Rep: Chloroplast 50S ribosomal
protein L23 - Scenedesmus obliquus
Length = 90
Score = 35.1 bits (77), Expect = 2.4
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -3
Query: 230 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 51
+ IK+P+T+E + + N F V K IK + L+ +NV +NT RP KK
Sbjct: 4 DFIKYPVTTEKSYLSMFKNKQYTFDVDLRLTKPQIKKLFETLFGVNVIGINT-HRPPRKK 62
>UniRef50_P10140 Cluster: 50S ribosomal protein L23; n=4;
Mollicutes|Rep: 50S ribosomal protein L23 - Mycoplasma
capricolum subsp. capricolum (strain California kid /
ATCC27343 / NCTC 10154)
Length = 94
Score = 34.7 bits (76), Expect = 3.1
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 63
M ++K P+ +E + +DN F+V ANK IK ++++++ V V T I
Sbjct: 1 MHITEVLKKPVLTEKSFAGHKDN-VYTFLVDKKANKVQIKKTFEEIFEVKVESVRT-INY 58
Query: 62 DGKKK 48
D K+K
Sbjct: 59 DAKEK 63
>UniRef50_Q08ZJ6 Cluster: 50S ribosomal protein L23; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: 50S ribosomal
protein L23 - Stigmatella aurantiaca DW4/3-1
Length = 99
Score = 33.9 bits (74), Expect = 5.5
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 69
M+ +++IK PL +E K E FIV A K + AV+ L+ ++V V T I
Sbjct: 1 MNIHDVIKGPLITEKLDKAREKFRQYSFIVDKKATKIDVARAVENLFKVSVEGVRTNI 58
>UniRef50_A5K3S7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 122
Score = 33.9 bits (74), Expect = 5.5
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -3
Query: 386 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRK-SLPKRNRMDAYNIIK 219
K +K+ + ++GK++R+ +N RRPK + R PK +K P++ + D N IK
Sbjct: 36 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPEKRQKD--NTIK 90
Score = 33.1 bits (72), Expect = 9.5
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -3
Query: 386 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 246
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 9 KNGKKIRRQKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 55
Score = 33.1 bits (72), Expect = 9.5
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -3
Query: 386 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 246
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 18 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 64
Score = 33.1 bits (72), Expect = 9.5
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -3
Query: 386 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 246
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 27 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 73
>UniRef50_Q6C803 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 964
Score = 33.9 bits (74), Expect = 5.5
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 99 IIEFLDCSLDMVLVCTCVNNKDQGVVIFNLLHCCFRREREFN-DVVGIHA-ISLRQRLPW 272
++E +C + V V V K + VV+ HC R + N D+ I RQ LPW
Sbjct: 119 VLECYNCGNENVFVLGFVTAKLENVVVLLCRHCIQRSPSDANWDIREWQTLIEDRQFLPW 178
Query: 273 VFRVPRR 293
+ +PRR
Sbjct: 179 LVPIPRR 185
>UniRef50_Q6F1Z2 Cluster: 50S ribosomal protein L23; n=3;
Firmicutes|Rep: 50S ribosomal protein L23 - Mesoplasma
florum (Acholeplasma florum)
Length = 94
Score = 33.9 bits (74), Expect = 5.5
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = -3
Query: 242 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 63
M +IK P+ +E + N F+V ANK IK ++++++ V V T+
Sbjct: 1 MHLTEVIKKPVLTEKSFLG-HANGVYTFLVDRRANKVQIKKTFEEIFEVKVESVRTM-NY 58
Query: 62 DGKKK 48
DGK+K
Sbjct: 59 DGKEK 63
>UniRef50_UPI0001555FAF Cluster: PREDICTED: similar to ribosomal
protein L23, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L23, partial -
Ornithorhynchus anatinus
Length = 75
Score = 33.5 bits (73), Expect = 7.2
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = -3
Query: 224 IKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 48
IK + SE K E VF V +ANK IK V+ ++++ V VNTL KK+
Sbjct: 5 IKEAVLSEKTFAKAEQK-VYVFRVAKNANKLKIKQDVEYIFNVKVKAVNTLNEAKQKKR 62
>UniRef50_Q06VN4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 73
Score = 33.1 bits (72), Expect = 9.5
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = -3
Query: 356 HGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIED 177
H K RK+ N+ ++PK F P P PR SL + D I + + + + + +
Sbjct: 6 HKKHCRKLYNTYSTKKPKRFFKPSRPPPPRNSLVDDDDDDDDKTITYSIGNLETLLLLLN 65
Query: 176 NN 171
NN
Sbjct: 66 NN 67
>UniRef50_Q6CUR1 Cluster: Similar to sp|P53583 Saccharomyces
cerevisiae YNL249c MPA43; n=1; Kluyveromyces lactis|Rep:
Similar to sp|P53583 Saccharomyces cerevisiae YNL249c
MPA43 - Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 516
Score = 33.1 bits (72), Expect = 9.5
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 84 FSNIYIIEFLDCSLDMVLVCTCV--NNKDQGVVIFNLLH 194
F+ +YI E+ CSL + C+ V KD+ ++ FNL+H
Sbjct: 60 FNTLYIQEYNICSLGVGATCSMVVGKQKDENLIPFNLIH 98
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,865,325
Number of Sequences: 1657284
Number of extensions: 9458645
Number of successful extensions: 29099
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 28220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29059
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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