Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12d05
(877 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 199 1e-50
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 199 1e-50
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 199 1e-50
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 199 1e-50
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 199 1e-50
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 199 1e-50
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 195 2e-49
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 162 2e-39
BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein. 149 2e-35
BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 pro... 148 2e-35
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 142 1e-33
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 142 1e-33
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 142 1e-33
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 142 1e-33
BC060042-1|AAH60042.1| 81|Homo sapiens LOC649946 protein protein. 81 5e-15
BC017930-1|AAH17930.1| 81|Homo sapiens LOC649946 protein protein. 81 5e-15
AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibilit... 51 6e-06
AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibilit... 51 6e-06
AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibilit... 51 6e-06
AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibilit... 51 6e-06
AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibilit... 51 6e-06
AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibilit... 51 6e-06
AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibili... 51 6e-06
BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibilit... 47 8e-05
BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibilit... 47 8e-05
BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein. 47 8e-05
AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens ... 43 0.002
Y14946-1|CAA75163.1| 957|Homo sapiens SPIN protein protein. 32 2.4
U77948-1|AAB48826.1| 957|Homo sapiens Bruton's tyrosine kinase-... 32 2.4
BC099907-1|AAH99907.1| 976|Homo sapiens general transcription f... 32 2.4
BC070484-1|AAH70484.1| 957|Homo sapiens general transcription f... 32 2.4
AF038969-1|AAC08315.1| 957|Homo sapiens general transcription f... 32 2.4
AF038968-1|AAC08314.1| 977|Homo sapiens general transcription f... 32 2.4
AF038967-1|AAC08313.1| 978|Homo sapiens general transcription f... 32 2.4
AF035737-1|AAC08312.1| 998|Homo sapiens general transcription f... 32 2.4
AF015553-1|AAB70791.1| 957|Homo sapiens TFII-I protein protein. 32 2.4
AC083884-4|AAS07464.1| 957|Homo sapiens unknown protein. 32 2.4
AC083884-3|AAS07462.1| 978|Homo sapiens unknown protein. 32 2.4
AC083884-2|AAS07463.1| 977|Homo sapiens unknown protein. 32 2.4
AC083884-1|AAS07461.1| 998|Homo sapiens unknown protein. 32 2.4
AC004883-1|AAL93085.1| 998|Homo sapiens general transcription f... 32 2.4
BC038855-1|AAH38855.1| 392|Homo sapiens TMEM16K protein protein. 32 3.1
EF041819-1|ABL09300.1| 782|Homo sapiens several ankyrin repeat ... 30 9.6
DQ508815-1|ABF60230.1| 593|Homo sapiens SARP protein. 30 9.6
AK095193-1|BAC04496.1| 389|Homo sapiens protein ( Homo sapiens ... 30 9.6
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 199 bits (485), Expect = 1e-50
Identities = 96/130 (73%), Positives = 108/130 (83%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 36
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVR
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 139
Query: 35 LARDYDALDV 6
LA DYDALDV
Sbjct: 140 LAPDYDALDV 149
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 199 bits (485), Expect = 1e-50
Identities = 96/130 (73%), Positives = 108/130 (83%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 36
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVR
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 139
Query: 35 LARDYDALDV 6
LA DYDALDV
Sbjct: 140 LAPDYDALDV 149
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 199 bits (485), Expect = 1e-50
Identities = 96/130 (73%), Positives = 108/130 (83%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 70
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 36
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVR
Sbjct: 71 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 130
Query: 35 LARDYDALDV 6
LA DYDALDV
Sbjct: 131 LAPDYDALDV 140
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 199 bits (485), Expect = 1e-50
Identities = 96/130 (73%), Positives = 108/130 (83%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 36
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVR
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 139
Query: 35 LARDYDALDV 6
LA DYDALDV
Sbjct: 140 LAPDYDALDV 149
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 199 bits (485), Expect = 1e-50
Identities = 96/130 (73%), Positives = 108/130 (83%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 36
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVR
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 139
Query: 35 LARDYDALDV 6
LA DYDALDV
Sbjct: 140 LAPDYDALDV 149
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 199 bits (485), Expect = 1e-50
Identities = 96/130 (73%), Positives = 108/130 (83%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 36
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVR
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 139
Query: 35 LARDYDALDV 6
LA DYDALDV
Sbjct: 140 LAPDYDALDV 149
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 195 bits (475), Expect = 2e-49
Identities = 94/130 (72%), Positives = 106/130 (81%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y II F
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIINF 79
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 36
PLT+E+AMKKIEDNNTLVFIV ANKH I AVKKLYDI+VAKVNTLIRPDG+KKAYVR
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQISQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 139
Query: 35 LARDYDALDV 6
LA DYDALDV
Sbjct: 140 LAPDYDALDV 149
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 162 bits (393), Expect = 2e-39
Identities = 78/130 (60%), Positives = 98/130 (75%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++ Y +IKF
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKF 79
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 36
PLT+E+A+K+ E+NNTL+F V ANKH IK AVKKLYD +VA+V TLI PDG+KKA VR
Sbjct: 80 PLTTESAVKRTEENNTLLFTVDVKANKHQIKQAVKKLYDGDVAEVTTLIPPDGEKKACVR 139
Query: 35 LARDYDALDV 6
LA DYDALDV
Sbjct: 140 LAPDYDALDV 149
>BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein.
Length = 121
Score = 149 bits (360), Expect = 2e-35
Identities = 71/107 (66%), Positives = 85/107 (79%)
Frame = -3
Query: 326 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHT 147
S+ FRRPKT R P+YP+KS P+RN++ Y IIKFPLT+E+A+KKIE+NNTLVF V
Sbjct: 2 SLTFRRPKTLRLRRQPRYPQKSTPRRNKLGHYAIIKFPLTTESAVKKIEENNTLVFTVDV 61
Query: 146 SANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDV 6
ANKH I+ AVKKLYD +VAKV TLI PD +KKAYVRLA DYDA +V
Sbjct: 62 KANKHQIRQAVKKLYDSDVAKVTTLICPDKEKKAYVRLAPDYDAFNV 108
>BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7
protein protein.
Length = 121
Score = 148 bits (359), Expect = 2e-35
Identities = 71/107 (66%), Positives = 83/107 (77%)
Frame = -3
Query: 326 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHT 147
S+ FRRPKT R P+YPRKS P+RN++ Y IIKFPL +E+A+KKIE+NNTLVF V
Sbjct: 2 SLTFRRPKTLRLRRQPRYPRKSTPRRNKLGHYAIIKFPLATESAVKKIEENNTLVFTVDV 61
Query: 146 SANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDV 6
ANKH I+ AVKKLYD +VAKV TLI PD + KAYVRLA DYDA DV
Sbjct: 62 KANKHQIRQAVKKLYDSDVAKVTTLICPDKENKAYVRLAPDYDAFDV 108
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 142 bits (345), Expect = 1e-33
Identities = 70/109 (64%), Positives = 85/109 (77%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 69
PLT+E AMKKI+DNNTLVF V ANKH IK AVKKL DI+ AKVNTL+
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCDIDGAKVNTLM 128
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 142 bits (345), Expect = 1e-33
Identities = 70/109 (64%), Positives = 85/109 (77%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 69
PLT+E AMKKI+DNNTLVF V ANKH IK AVKKL DI+ AKVNTL+
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCDIDGAKVNTLM 128
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 142 bits (345), Expect = 1e-33
Identities = 70/109 (64%), Positives = 85/109 (77%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 69
PLT+E AMKKI+DNNTLVF V ANKH IK AVKKL DI+ AKVNTL+
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCDIDGAKVNTLM 128
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 142 bits (345), Expect = 1e-33
Identities = 70/109 (64%), Positives = 85/109 (77%)
Frame = -3
Query: 395 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 216
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 215 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 69
PLT+E AMKKI+DNNTLVF V ANKH IK AVKKL DI+ AKVNTL+
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCDIDGAKVNTLM 128
>BC060042-1|AAH60042.1| 81|Homo sapiens LOC649946 protein protein.
Length = 81
Score = 81.0 bits (191), Expect = 5e-15
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = -3
Query: 194 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDA 15
MKK EDNN LVF V+ ANKH KKLYD +VAKVNTLIRPDG+K+ +VRLA DY+A
Sbjct: 1 MKKTEDNNALVFTVNVKANKHQ-----KKLYDTDVAKVNTLIRPDGEKE-HVRLAPDYNA 54
Query: 14 LDV 6
LDV
Sbjct: 55 LDV 57
>BC017930-1|AAH17930.1| 81|Homo sapiens LOC649946 protein protein.
Length = 81
Score = 81.0 bits (191), Expect = 5e-15
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = -3
Query: 194 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDA 15
MKK EDNN LVF V+ ANKH KKLYD +VAKVNTLIRPDG+K+ +VRLA DY+A
Sbjct: 1 MKKTEDNNALVFTVNVKANKHQ-----KKLYDTDVAKVNTLIRPDGEKE-HVRLAPDYNA 54
Query: 14 LDV 6
LDV
Sbjct: 55 LDV 57
>AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = +1
Query: 196 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 375
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 376 L*ALSALVTGF 408
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = +1
Query: 196 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 375
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 376 L*ALSALVTGF 408
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = +1
Query: 196 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 375
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 376 L*ALSALVTGF 408
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = +1
Query: 196 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 375
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 376 L*ALSALVTGF 408
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = +1
Query: 196 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 375
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 376 L*ALSALVTGF 408
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = +1
Query: 196 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 375
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 376 L*ALSALVTGF 408
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = +1
Query: 196 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 375
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 376 L*ALSALVTGF 408
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibility
complex class I F protein.
Length = 123
Score = 47.2 bits (107), Expect = 8e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = +1
Query: 196 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 375
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 376 L*ALSALVTGF 408
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibility
complex class I F protein.
Length = 442
Score = 47.2 bits (107), Expect = 8e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = +1
Query: 196 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 375
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 376 L*ALSALVTGF 408
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein.
Length = 460
Score = 47.2 bits (107), Expect = 8e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = +1
Query: 196 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 375
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 364 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 423
Query: 376 L*ALSALVTGF 408
AL +L GF
Sbjct: 424 FLALQSLRFGF 434
>AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens
cDNA FLJ43284 fis, clone LYMPB2000083, highly similar
to HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ALPHA CHAIN F
PRECURSOR. ).
Length = 349
Score = 42.7 bits (96), Expect = 0.002
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1
Query: 196 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 336
A S V GNLM+ S FLLG F GYLGCL +VLG RK L +
Sbjct: 260 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 306
>Y14946-1|CAA75163.1| 957|Homo sapiens SPIN protein protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -3
Query: 344 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 165
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 730 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 783
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 784 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 825
>U77948-1|AAB48826.1| 957|Homo sapiens Bruton's tyrosine
kinase-associated protein-135 protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -3
Query: 344 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 165
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 730 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 783
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 784 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 825
>BC099907-1|AAH99907.1| 976|Homo sapiens general transcription factor
II, i protein.
Length = 976
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -3
Query: 344 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 165
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 749 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 802
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 803 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 844
>BC070484-1|AAH70484.1| 957|Homo sapiens general transcription factor
II, i protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -3
Query: 344 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 165
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 730 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 783
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 784 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 825
>AF038969-1|AAC08315.1| 957|Homo sapiens general transcription factor
2-I protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -3
Query: 344 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 165
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 730 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 783
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 784 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 825
>AF038968-1|AAC08314.1| 977|Homo sapiens general transcription factor
2-I protein.
Length = 977
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -3
Query: 344 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 165
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 750 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 803
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 804 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 845
>AF038967-1|AAC08313.1| 978|Homo sapiens general transcription factor
2-I protein.
Length = 978
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -3
Query: 344 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 165
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 751 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 804
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 805 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 846
>AF035737-1|AAC08312.1| 998|Homo sapiens general transcription factor
2-I; alternative splice product protein.
Length = 998
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -3
Query: 344 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 165
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 771 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 824
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 825 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 866
>AF015553-1|AAB70791.1| 957|Homo sapiens TFII-I protein protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -3
Query: 344 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 165
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 730 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 783
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 784 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 825
>AC083884-4|AAS07464.1| 957|Homo sapiens unknown protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -3
Query: 344 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 165
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 730 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 783
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 784 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 825
>AC083884-3|AAS07462.1| 978|Homo sapiens unknown protein.
Length = 978
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -3
Query: 344 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 165
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 751 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 804
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 805 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 846
>AC083884-2|AAS07463.1| 977|Homo sapiens unknown protein.
Length = 977
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -3
Query: 344 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 165
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 750 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 803
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 804 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 845
>AC083884-1|AAS07461.1| 998|Homo sapiens unknown protein.
Length = 998
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -3
Query: 344 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 165
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 771 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 824
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 825 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 866
>AC004883-1|AAL93085.1| 998|Homo sapiens general transcription factor
2I protein.
Length = 998
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -3
Query: 344 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 165
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 771 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 824
Query: 164 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 27
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 825 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 866
>BC038855-1|AAH38855.1| 392|Homo sapiens TMEM16K protein protein.
Length = 392
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -3
Query: 290 PRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDN-NTLVFIVHTSANKHHIKAAV 114
P+ YP KSL +R I FPL A+KK+ED T + + H +++A
Sbjct: 69 PQAKLYPGKSLLRRLLTSGIVIQVFPLHDSEALKKLEDTWYTRFALKYQPIENHRLESAY 128
Query: 113 KKLYDINVAKVNTL 72
+ + V N L
Sbjct: 129 QNHLILKVLVFNFL 142
>EF041819-1|ABL09300.1| 782|Homo sapiens several ankyrin repeat
protein transcript variant 2 protein.
Length = 782
Score = 30.3 bits (65), Expect = 9.6
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -3
Query: 230 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVN 78
NI++F +E K +ED TL F H +A K + +KKL + V +N
Sbjct: 507 NILQFIQGAEYEGKDLEDQETLAFPGHVAAFKGDL-GMLKKLVEDGVININ 556
>DQ508815-1|ABF60230.1| 593|Homo sapiens SARP protein.
Length = 593
Score = 30.3 bits (65), Expect = 9.6
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -3
Query: 230 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVN 78
NI++F +E K +ED TL F H +A K + +KKL + V +N
Sbjct: 334 NILQFIQGAEYEGKDLEDQETLAFPGHVAAFKGDL-GMLKKLVEDGVININ 383
>AK095193-1|BAC04496.1| 389|Homo sapiens protein ( Homo sapiens
cDNA FLJ37874 fis, clone BRSSN2018731, weakly similar to
ANKYRIN 1. ).
Length = 389
Score = 30.3 bits (65), Expect = 9.6
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -3
Query: 230 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVN 78
NI++F +E K +ED TL F H +A K + +KKL + V +N
Sbjct: 215 NILQFIQGAEYEGKDLEDQETLAFPGHVAAFKGDL-GMLKKLVEDGVININ 264
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,905,593
Number of Sequences: 237096
Number of extensions: 1546420
Number of successful extensions: 7466
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 7319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7444
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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