Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12d04
(844 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 25 2.2
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 25 2.2
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 25 2.2
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 25 2.2
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 25 2.2
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 25 2.2
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 25 2.2
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 25 2.2
AY341224-1|AAR13788.1| 287|Anopheles gambiae TOLL9 protein. 24 6.7
AY341223-1|AAR13787.1| 287|Anopheles gambiae TOLL9 protein. 24 6.7
AY341222-1|AAR13786.1| 287|Anopheles gambiae TOLL9 protein. 24 6.7
AY341221-1|AAR13785.1| 287|Anopheles gambiae TOLL9 protein. 24 6.7
AY341220-1|AAR13784.1| 287|Anopheles gambiae TOLL9 protein. 24 6.7
AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein. 24 6.7
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 23 8.8
U50475-1|AAA93477.1| 207|Anopheles gambiae protein ( Anopheles ... 23 8.8
AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein. 23 8.8
AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein. 23 8.8
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 23 8.8
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -2
Query: 810 SYQTFYNNHKEFVHSQGLNHEQNIKKMRIL 721
+Y+ ++ KEFV SQG++ +Q + + I+
Sbjct: 334 NYKISFDAVKEFVDSQGISQKQILPRKEII 363
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 25.4 bits (53), Expect = 2.2
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +1
Query: 457 HGLVRLVHVSAPRQQHVAQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQY 618
H + H SAP H A + AP A H A +VH +H + Y
Sbjct: 179 HHAAPIAHYSAPIAHHAAPIAHYAAP-IAHHAAPIAHSTSSIVHGPSHLSHHHY 231
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 25.4 bits (53), Expect = 2.2
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +1
Query: 457 HGLVRLVHVSAPRQQHVAQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQY 618
H + H SAP H A + AP A H A +VH +H + Y
Sbjct: 187 HHAAPIAHYSAPIAHHAAPIAHYAAP-IAHHAAPIAHSTSSIVHGPSHLSHHHY 239
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 25.4 bits (53), Expect = 2.2
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +1
Query: 457 HGLVRLVHVSAPRQQHVAQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQY 618
H + H SAP H A + AP A H A +VH +H + Y
Sbjct: 187 HHAAPIAHYSAPIAHHAAPIAHYAAP-IAHHAAPIAHSTSSIVHGPSHLSHHHY 239
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 25.4 bits (53), Expect = 2.2
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +1
Query: 457 HGLVRLVHVSAPRQQHVAQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQY 618
H + H SAP H A + AP A H A +VH +H + Y
Sbjct: 211 HHAAPIAHYSAPIAHHAAPIAHYAAP-IAHHAAPIAHSTSSIVHGPSHLSHHHY 263
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 25.4 bits (53), Expect = 2.2
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +1
Query: 457 HGLVRLVHVSAPRQQHVAQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQY 618
H + H SAP H A + AP A H A +VH +H + Y
Sbjct: 179 HHAAPIAHYSAPIAHHAAPIAHYAAP-IAHHAAPIAHSTSSIVHGPSHLSHHHY 231
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 25.4 bits (53), Expect = 2.2
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +1
Query: 457 HGLVRLVHVSAPRQQHVAQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQY 618
H + H SAP H A + AP A H A +VH +H + Y
Sbjct: 187 HHAAPIAHYSAPIAHHAAPIAHYAAP-IAHHAAPIAHSTSSIVHGPSHLSHHHY 239
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 25.4 bits (53), Expect = 2.2
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +1
Query: 457 HGLVRLVHVSAPRQQHVAQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQY 618
H + H SAP H A + AP A H A +VH +H + Y
Sbjct: 179 HHAAPIAHYSAPIAHHAAPITHYAAP-IAHHAAPIAHSTSSIVHGPSHLSHHHY 231
>AY341224-1|AAR13788.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.8 bits (49), Expect = 6.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 74 GLSFYYYPFGLHYYFKTPSPSSNYKFMS 157
G+ +YY F + Y+FK S+ F +
Sbjct: 160 GVGLFYYWFHIKYFFKIMKNSAVLSFFN 187
>AY341223-1|AAR13787.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.8 bits (49), Expect = 6.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 74 GLSFYYYPFGLHYYFKTPSPSSNYKFMS 157
G+ +YY F + Y+FK S+ F +
Sbjct: 160 GVGLFYYWFHIKYFFKIMKNSAVLSFFN 187
>AY341222-1|AAR13786.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.8 bits (49), Expect = 6.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 74 GLSFYYYPFGLHYYFKTPSPSSNYKFMS 157
G+ +YY F + Y+FK S+ F +
Sbjct: 160 GVGLFYYWFHIKYFFKIMKNSAVLSFFN 187
>AY341221-1|AAR13785.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.8 bits (49), Expect = 6.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 74 GLSFYYYPFGLHYYFKTPSPSSNYKFMS 157
G+ +YY F + Y+FK S+ F +
Sbjct: 160 GVGLFYYWFHIKYFFKIMKNSAVLSFFN 187
>AY341220-1|AAR13784.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.8 bits (49), Expect = 6.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 74 GLSFYYYPFGLHYYFKTPSPSSNYKFMS 157
G+ +YY F + Y+FK S+ F +
Sbjct: 160 GVGLFYYWFHIKYFFKIMKNSAVLSFFN 187
>AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein.
Length = 576
Score = 23.8 bits (49), Expect = 6.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 74 GLSFYYYPFGLHYYFKTPSPSSNYKFMS 157
G+ +YY F + Y+FK S+ F +
Sbjct: 387 GVGLFYYWFHIKYFFKIMKNSAVLSFFN 414
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 23.4 bits (48), Expect = 8.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 104 LHYYFKTPSPSSNYKFMSFTRHVNTD 181
L+YYFK PS Y+ ++F V D
Sbjct: 429 LYYYFKRFLPSYTYEELNFNGVVIKD 454
>U50475-1|AAA93477.1| 207|Anopheles gambiae protein ( Anopheles
gambiae putativearylphorin precursor, mRNA, partial cds.
).
Length = 207
Score = 23.4 bits (48), Expect = 8.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 104 LHYYFKTPSPSSNYKFMSFTRHVNTD 181
L+YYFK PS Y+ ++F V D
Sbjct: 97 LYYYFKRFLPSYTYEELNFNGVVIKD 122
>AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 23.4 bits (48), Expect = 8.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 104 LHYYFKTPSPSSNYKFMSFTRHVNTD 181
L+YYFK PS Y+ ++F V D
Sbjct: 429 LYYYFKRFLPSYTYEELNFNGVVIKD 454
>AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 23.4 bits (48), Expect = 8.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 104 LHYYFKTPSPSSNYKFMSFTRHVNTD 181
L+YYFK PS Y+ ++F V D
Sbjct: 429 LYYYFKRFLPSYTYEELNFNGVVIKD 454
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 23.4 bits (48), Expect = 8.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 104 LHYYFKTPSPSSNYKFMSFTRHVNTD 181
L+YYFK PS Y+ ++F V D
Sbjct: 429 LYYYFKRFLPSYTYEELNFNGVVIKD 454
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,164
Number of Sequences: 2352
Number of extensions: 14629
Number of successful extensions: 36
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -