Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12d02
(888 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF452236-1|ABO40479.1| 1866|Homo sapiens NOD4 protein. 37 0.11
BC063566-1|AAH63566.1| 837|Homo sapiens NLRC5 protein protein. 37 0.11
AK027416-1|BAB55098.1| 753|Homo sapiens protein ( Homo sapiens ... 37 0.11
AK027414-1|BAB55096.1| 753|Homo sapiens protein ( Homo sapiens ... 37 0.11
AF389420-1|AAO59377.1| 1866|Homo sapiens NOD27 protein. 37 0.11
AK092588-1|BAC03921.1| 232|Homo sapiens protein ( Homo sapiens ... 35 0.45
BC132701-1|AAI32702.1| 232|Homo sapiens chromosome 9 open readi... 33 1.8
BC132699-1|AAI32700.1| 232|Homo sapiens chromosome 9 open readi... 33 1.8
AY601811-1|AAT48367.1| 1065|Homo sapiens caterpiller 16.2 protein. 33 1.8
AK074109-1|BAB84935.1| 499|Homo sapiens FLJ00180 protein protein. 33 1.8
BC018788-1|AAH18788.1| 308|Homo sapiens HABP4 protein protein. 32 2.4
AL133477-5|CAI39621.1| 308|Homo sapiens hyaluronan binding prot... 32 2.4
AL133477-4|CAI39620.1| 413|Homo sapiens hyaluronan binding prot... 32 2.4
AL162431-5|CAH74092.1| 811|Homo sapiens KIAA1614 protein. 32 3.2
AL162431-4|CAH74091.1| 1190|Homo sapiens KIAA1614 protein. 32 3.2
AB046834-1|BAB13440.1| 1208|Homo sapiens KIAA1614 protein protein. 32 3.2
BC028069-1|AAH28069.1| 1061|Homo sapiens NLR family, pyrin domai... 31 7.4
BC016161-1|AAH16161.1| 404|Homo sapiens dapper, antagonist of b... 31 7.4
AY154467-1|AAO18163.1| 1061|Homo sapiens NALP12 protein. 31 7.4
AY116207-1|AAM75145.1| 892|Homo sapiens monarch-1 splice form I... 31 7.4
AY116206-1|AAM75144.1| 950|Homo sapiens monarch-1 splice form I... 31 7.4
AY116205-1|AAM75143.1| 1006|Homo sapiens monarch-1 splice form I... 31 7.4
AY116204-1|AAM75142.1| 1062|Homo sapiens monarch-1 protein. 31 7.4
AY095146-1|AAM18227.1| 1061|Homo sapiens PYRIN-containing APAF1-... 31 7.4
AK090431-1|BAC03412.1| 778|Homo sapiens FLJ00348 protein protein. 31 7.4
BC042050-1|AAH42050.1| 453|Homo sapiens CHMP family, member 7 p... 30 9.8
BC019110-1|AAH19110.1| 453|Homo sapiens CHMP family, member 7 p... 30 9.8
BC004344-1|AAH04344.1| 411|Homo sapiens CHMP7 protein protein. 30 9.8
AF241831-1|AAF62546.1| 413|Homo sapiens intracellular hyalurona... 30 9.8
>EF452236-1|ABO40479.1| 1866|Homo sapiens NOD4 protein.
Length = 1866
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = -3
Query: 880 GARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSLGN 701
G L++A + + LE LDLSHN+IG L + LP+ L +I L+GNS+ +
Sbjct: 1594 GCCHLSEALRA-ATSLEELDLSHNQIGDAGVQHLATILPGLPE----LRKIDLSGNSISS 1648
Query: 700 A 698
A
Sbjct: 1649 A 1649
>BC063566-1|AAH63566.1| 837|Homo sapiens NLRC5 protein protein.
Length = 837
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = -3
Query: 880 GARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSLGN 701
G L++A + + LE LDLSHN+IG L + LP+ L +I L+GNS+ +
Sbjct: 565 GCCHLSEALRA-ATSLEELDLSHNQIGDAGVQHLATILPGLPE----LRKIDLSGNSISS 619
Query: 700 A 698
A
Sbjct: 620 A 620
>AK027416-1|BAB55098.1| 753|Homo sapiens protein ( Homo sapiens
cDNA FLJ14510 fis, clone NT2RM1000623, weakly similar to
RIBONUCLEASE INHIBITOR. ).
Length = 753
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = -3
Query: 880 GARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSLGN 701
G L++A + + LE LDLSHN+IG L + LP+ L +I L+GNS+ +
Sbjct: 481 GCCHLSEALRA-ATSLEELDLSHNQIGDAGVQHLATILPGLPE----LRKIDLSGNSISS 535
Query: 700 A 698
A
Sbjct: 536 A 536
>AK027414-1|BAB55096.1| 753|Homo sapiens protein ( Homo sapiens
cDNA FLJ14508 fis, clone NT2RM1000421, weakly similar to
RIBONUCLEASE INHIBITOR. ).
Length = 753
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = -3
Query: 880 GARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSLGN 701
G L++A + + LE LDLSHN+IG L + LP+ L +I L+GNS+ +
Sbjct: 481 GCCHLSEALRA-ATSLEELDLSHNQIGDAGVQHLATILPGLPE----LRKIDLSGNSISS 535
Query: 700 A 698
A
Sbjct: 536 A 536
>AF389420-1|AAO59377.1| 1866|Homo sapiens NOD27 protein.
Length = 1866
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = -3
Query: 880 GARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSLGN 701
G L++A + + LE LDLSHN+IG L + LP+ L +I L+GNS+ +
Sbjct: 1594 GCCHLSEALRA-ATSLEELDLSHNQIGDAGVQHLATILPGLPE----LRKIDLSGNSISS 1648
Query: 700 A 698
A
Sbjct: 1649 A 1649
>AK092588-1|BAC03921.1| 232|Homo sapiens protein ( Homo sapiens
cDNA FLJ35269 fis, clone PROST2005466. ).
Length = 232
Score = 34.7 bits (76), Expect = 0.45
Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 625 HHRCPPHR*ALLKHRAYLSGSSCWP--HCPSCSLPKLSG*VFPDCRAAR*WHPPAPCTPL 798
+H P HR AL H + + P HCP C +P G D R R H P PC PL
Sbjct: 151 NHVSPAHRQALRGHSLGSALRALMPGRHCPLC-VPCKRG---CDLRGGRGKHGPRPCCPL 206
Query: 799 VR 804
+R
Sbjct: 207 LR 208
>BC132701-1|AAI32702.1| 232|Homo sapiens chromosome 9 open reading
frame 106 protein.
Length = 232
Score = 32.7 bits (71), Expect = 1.8
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 625 HHRCPPHR*ALLKHRAYLSGSSCWP--HCPSCSLPKLSG*VFPDCRAAR*WHPPAPCTPL 798
+H P HR AL H + + P HCP C +P G + R R H P PC PL
Sbjct: 151 NHVSPAHRQALRGHSLGSALRALMPGRHCPLC-VPCKRG---CNLRGGRGKHGPRPCCPL 206
Query: 799 VR 804
+R
Sbjct: 207 LR 208
>BC132699-1|AAI32700.1| 232|Homo sapiens chromosome 9 open reading
frame 106 protein.
Length = 232
Score = 32.7 bits (71), Expect = 1.8
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 625 HHRCPPHR*ALLKHRAYLSGSSCWP--HCPSCSLPKLSG*VFPDCRAAR*WHPPAPCTPL 798
+H P HR AL H + + P HCP C +P G + R R H P PC PL
Sbjct: 151 NHVSPAHRQALRGHSLGSALRALMPGRHCPLC-VPCKRG---CNLRGGRGKHGPRPCCPL 206
Query: 799 VR 804
+R
Sbjct: 207 LR 208
>AY601811-1|AAT48367.1| 1065|Homo sapiens caterpiller 16.2 protein.
Length = 1065
Score = 32.7 bits (71), Expect = 1.8
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = -3
Query: 886 SRGARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSL 707
++GA+ALA++ N L SLDL N IG + L DA+ L+ + L GN++
Sbjct: 680 NKGAKALARSLLVNR-SLTSLDLRGNSIGPQGAKALADAL----KINRTLTSLSLQGNTV 734
Query: 706 GNAANKKSLKDKLGASAELS 647
+ +S+ + L ++ LS
Sbjct: 735 RD-DGARSMAEALASNRTLS 753
>AK074109-1|BAB84935.1| 499|Homo sapiens FLJ00180 protein protein.
Length = 499
Score = 32.7 bits (71), Expect = 1.8
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = -3
Query: 886 SRGARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSL 707
++GA+ALA++ N L SLDL N IG + L DA+ L+ + L GN++
Sbjct: 114 NKGAKALARSLLVNR-SLTSLDLRGNSIGPQGAKALADAL----KINRTLTSLSLQGNTV 168
Query: 706 GNAANKKSLKDKLGASAELS 647
+ +S+ + L ++ LS
Sbjct: 169 RD-DGARSMAEALASNRTLS 187
>BC018788-1|AAH18788.1| 308|Homo sapiens HABP4 protein protein.
Length = 308
Score = 32.3 bits (70), Expect = 2.4
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Frame = -2
Query: 395 RQGCRAHRRSSADDPRSGCYDRGLRS-SGSVRQRPVVPERGGHRPRQATLPAVHSQG*TA 219
+Q + RR A +G RG RS +G+ R R + + +LPA +Q +
Sbjct: 50 QQQLQRKRRDEAA-AAAGAGPRGGRSPAGASGHRAGAGGRRESQKERKSLPAPVAQRPDS 108
Query: 218 NGSG*LALTRIRTYQVGEQ-GL*DKVGPARLLQHPGQRSGRGLLPRRAQRHIE 63
G G A + RT + GEQ G D GP +L+ +RS R P +R +
Sbjct: 109 PGGGLQAPGQKRTPRRGEQQGWNDSRGPEGMLERAERRSYREYRPYETERQAD 161
>AL133477-5|CAI39621.1| 308|Homo sapiens hyaluronan binding protein
4 protein.
Length = 308
Score = 32.3 bits (70), Expect = 2.4
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Frame = -2
Query: 395 RQGCRAHRRSSADDPRSGCYDRGLRS-SGSVRQRPVVPERGGHRPRQATLPAVHSQG*TA 219
+Q + RR A +G RG RS +G+ R R + + +LPA +Q +
Sbjct: 50 QQQLQRKRRDEAA-AAAGAGPRGGRSPAGASGHRAGAGGRRESQKERKSLPAPVAQRPDS 108
Query: 218 NGSG*LALTRIRTYQVGEQ-GL*DKVGPARLLQHPGQRSGRGLLPRRAQRHIE 63
G G A + RT + GEQ G D GP +L+ +RS R P +R +
Sbjct: 109 PGGGLQAPGQKRTPRRGEQQGWNDSRGPEGMLERAERRSYREYRPYETERQAD 161
>AL133477-4|CAI39620.1| 413|Homo sapiens hyaluronan binding protein
4 protein.
Length = 413
Score = 32.3 bits (70), Expect = 2.4
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Frame = -2
Query: 395 RQGCRAHRRSSADDPRSGCYDRGLRS-SGSVRQRPVVPERGGHRPRQATLPAVHSQG*TA 219
+Q + RR A +G RG RS +G+ R R + + +LPA +Q +
Sbjct: 50 QQQLQRKRRDEAA-AAAGAGPRGGRSPAGASGHRAGAGGRRESQKERKSLPAPVAQRPDS 108
Query: 218 NGSG*LALTRIRTYQVGEQ-GL*DKVGPARLLQHPGQRSGRGLLPRRAQRHIE 63
G G A + RT + GEQ G D GP +L+ +RS R P +R +
Sbjct: 109 PGGGLQAPGQKRTPRRGEQQGWNDSRGPEGMLERAERRSYREYRPYETERQAD 161
>AL162431-5|CAH74092.1| 811|Homo sapiens KIAA1614 protein.
Length = 811
Score = 31.9 bits (69), Expect = 3.2
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -2
Query: 392 QGCRAHRRSSADDPRSGCYDRGLRSSGSVRQRPVVPERGGHRPRQATLPA 243
QG R RS A DPR+ R +G GGHRPR+ P+
Sbjct: 20 QGSRDGHRSPARDPRTTPACRDSLQNGHTSDSSSGESSGGHRPRRGPSPS 69
>AL162431-4|CAH74091.1| 1190|Homo sapiens KIAA1614 protein.
Length = 1190
Score = 31.9 bits (69), Expect = 3.2
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -2
Query: 392 QGCRAHRRSSADDPRSGCYDRGLRSSGSVRQRPVVPERGGHRPRQATLPA 243
QG R RS A DPR+ R +G GGHRPR+ P+
Sbjct: 399 QGSRDGHRSPARDPRTTPACRDSLQNGHTSDSSSGESSGGHRPRRGPSPS 448
>AB046834-1|BAB13440.1| 1208|Homo sapiens KIAA1614 protein protein.
Length = 1208
Score = 31.9 bits (69), Expect = 3.2
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -2
Query: 392 QGCRAHRRSSADDPRSGCYDRGLRSSGSVRQRPVVPERGGHRPRQATLPA 243
QG R RS A DPR+ R +G GGHRPR+ P+
Sbjct: 417 QGSRDGHRSPARDPRTTPACRDSLQNGHTSDSSSGESSGGHRPRRGPSPS 466
>BC028069-1|AAH28069.1| 1061|Homo sapiens NLR family, pyrin domain
containing 12 protein.
Length = 1061
Score = 30.7 bits (66), Expect = 7.4
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -3
Query: 886 SRGARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSL 707
SRG + L + + + L++L L I AC +L A+ + + L+R+ L+GN +
Sbjct: 727 SRGVKLLCQGLRHPNCKLQNLRLKRCRISSSACEDLSAALI----ANKNLTRMDLSGNGV 782
Query: 706 G 704
G
Sbjct: 783 G 783
>BC016161-1|AAH16161.1| 404|Homo sapiens dapper, antagonist of
beta-catenin, homolog 3 (Xenopus laevis) protein.
Length = 404
Score = 30.7 bits (66), Expect = 7.4
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = -2
Query: 383 RAHRRSSADDPRS--GCYDRGLRSSGSVRQRP--VVPERGGHRP-RQATLPAV 240
R RR A PR+ G D G R SVRQRP P G RP R+ +L V
Sbjct: 33 RRRRRRGAGQPRTSPGGADGGPRRQNSVRQRPPDASPSPGSARPAREPSLERV 85
>AY154467-1|AAO18163.1| 1061|Homo sapiens NALP12 protein.
Length = 1061
Score = 30.7 bits (66), Expect = 7.4
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -3
Query: 886 SRGARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSL 707
SRG + L + + + L++L L I AC +L A+ + + L+R+ L+GN +
Sbjct: 727 SRGVKLLCQGLRHPNCKLQNLRLKRCRISSSACEDLSAALI----ANKNLTRMDLSGNGV 782
Query: 706 G 704
G
Sbjct: 783 G 783
>AY116207-1|AAM75145.1| 892|Homo sapiens monarch-1 splice form IV
protein.
Length = 892
Score = 30.7 bits (66), Expect = 7.4
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -3
Query: 886 SRGARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSL 707
SRG + L + + + L++L L I AC +L A+ + + L+R+ L+GN +
Sbjct: 728 SRGVKLLCQGLRHPNCKLQNLRLKRCRISSSACEDLSAALI----ANKNLTRMDLSGNGV 783
Query: 706 G 704
G
Sbjct: 784 G 784
>AY116206-1|AAM75144.1| 950|Homo sapiens monarch-1 splice form III
protein.
Length = 950
Score = 30.7 bits (66), Expect = 7.4
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -3
Query: 886 SRGARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSL 707
SRG + L + + + L++L L I AC +L A+ + + L+R+ L+GN +
Sbjct: 728 SRGVKLLCQGLRHPNCKLQNLRLKRCRISSSACEDLSAALI----ANKNLTRMDLSGNGV 783
Query: 706 G 704
G
Sbjct: 784 G 784
>AY116205-1|AAM75143.1| 1006|Homo sapiens monarch-1 splice form II
protein.
Length = 1006
Score = 30.7 bits (66), Expect = 7.4
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -3
Query: 886 SRGARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSL 707
SRG + L + + + L++L L I AC +L A+ + + L+R+ L+GN +
Sbjct: 728 SRGVKLLCQGLRHPNCKLQNLRLKRCRISSSACEDLSAALI----ANKNLTRMDLSGNGV 783
Query: 706 G 704
G
Sbjct: 784 G 784
>AY116204-1|AAM75142.1| 1062|Homo sapiens monarch-1 protein.
Length = 1062
Score = 30.7 bits (66), Expect = 7.4
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -3
Query: 886 SRGARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSL 707
SRG + L + + + L++L L I AC +L A+ + + L+R+ L+GN +
Sbjct: 728 SRGVKLLCQGLRHPNCKLQNLRLKRCRISSSACEDLSAALI----ANKNLTRMDLSGNGV 783
Query: 706 G 704
G
Sbjct: 784 G 784
>AY095146-1|AAM18227.1| 1061|Homo sapiens PYRIN-containing
APAF1-like protein 7 protein.
Length = 1061
Score = 30.7 bits (66), Expect = 7.4
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -3
Query: 886 SRGARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSL 707
SRG + L + + + L++L L I AC +L A+ + + L+R+ L+GN +
Sbjct: 727 SRGVKLLCQGLRHPNCKLQNLRLKRCRISSSACEDLSAALI----ANKNLTRMDLSGNGV 782
Query: 706 G 704
G
Sbjct: 783 G 783
>AK090431-1|BAC03412.1| 778|Homo sapiens FLJ00348 protein protein.
Length = 778
Score = 30.7 bits (66), Expect = 7.4
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -3
Query: 886 SRGARALAKAFKGNSLXLESLDLSHNEIGREACMELVDAI 767
++GA+ALA++ N L SLDL N IG + L DA+
Sbjct: 697 NKGAKALARSLLVNR-SLTSLDLRGNSIGPQGAKALADAL 735
>BC042050-1|AAH42050.1| 453|Homo sapiens CHMP family, member 7
protein.
Length = 453
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = -3
Query: 856 FKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSLGNAANKKSLK 677
F + +L LS ++ E LVD I EL D+Q+ +S+ + G + G + + L+
Sbjct: 322 FNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDSEELE 381
Query: 676 DKL 668
+L
Sbjct: 382 KEL 384
>BC019110-1|AAH19110.1| 453|Homo sapiens CHMP family, member 7
protein.
Length = 453
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = -3
Query: 856 FKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSLGNAANKKSLK 677
F + +L LS ++ E LVD I EL D+Q+ +S+ + G + G + + L+
Sbjct: 322 FNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDSEELE 381
Query: 676 DKL 668
+L
Sbjct: 382 KEL 384
>BC004344-1|AAH04344.1| 411|Homo sapiens CHMP7 protein protein.
Length = 411
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = -3
Query: 856 FKGNSLXLESLDLSHNEIGREACMELVDAITELPDSQERLSRIVLAGNSLGNAANKKSLK 677
F + +L LS ++ E LVD I EL D+Q+ +S+ + G + G + + L+
Sbjct: 280 FNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDSEELE 339
Query: 676 DKL 668
+L
Sbjct: 340 KEL 342
>AF241831-1|AAF62546.1| 413|Homo sapiens intracellular
hyaluronan-binding protein protein.
Length = 413
Score = 30.3 bits (65), Expect = 9.8
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = -2
Query: 395 RQGCRAHRRSSADDPRSGCYDRGLRS-SGSVRQRPVVPERGGHRPRQATLPAVHSQG*TA 219
+Q + RR A +G RG RS +G+ R R + + +LPA + +
Sbjct: 50 QQQLQRKRRDEAA-AAAGAGPRGGRSPAGASGHRAGAGGRRESQKERKSLPAPVAHRPDS 108
Query: 218 NGSG*LALTRIRTYQVGEQ-GL*DKVGPARLLQHPGQRSGRGLLPRRAQRHIE 63
G G A + RT + GEQ G D GP +L+ +RS R P +R +
Sbjct: 109 PGGGLQAPGQKRTPRRGEQQGWNDSRGPEGMLERAERRSYREYRPYETERQAD 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,707,032
Number of Sequences: 237096
Number of extensions: 2254363
Number of successful extensions: 10282
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 9761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10282
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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