Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12c19
(301 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 25 0.13
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 24 0.31
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 23 0.93
EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 22 1.6
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 21 2.9
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 21 2.9
DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9 prot... 20 5.0
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 20 5.0
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 20 5.0
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 20 6.6
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 20 6.6
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 20 6.6
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 20 6.6
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 19 8.7
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 19 8.7
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 19 8.7
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 19 8.7
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 25.4 bits (53), Expect = 0.13
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 218 LFVSVMSFTIVMGLECLKTKLVDSSLMFNSFMCA-LYIMIATVWSL 84
LF + +SF + L +L+ F+SFM + L+ +A+ W L
Sbjct: 73 LFCASLSFYKAFKIGILLNQLITPLFFFHSFMTSVLFSQVASRWPL 118
Score = 21.4 bits (43), Expect = 2.2
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = -2
Query: 228 YGYIVCFSYEFYYCYGFRMFENE 160
+GY+ C S FY + + N+
Sbjct: 70 FGYLFCASLSFYKAFKIGILLNQ 92
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 24.2 bits (50), Expect = 0.31
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 272 TMGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKTKLVDSSL-MFNSFMCALYIMIA 99
T+G + K+C +VI+F ++ ++ K L D L FN+F L +++
Sbjct: 29 TVGKCQRLKTDKNCTIVIIFHLILFAVLLYFASLEKNPLFDGQLYSFNTFAKLLIFVVS 87
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 22.6 bits (46), Expect = 0.93
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -2
Query: 261 VHGLSICQIMLYGYIVCFSYEFYYCY 184
++G +L + +C + +FYYCY
Sbjct: 231 IYGFQNFLFVLSTFSICIT-QFYYCY 255
>EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450
protein.
Length = 493
Score = 21.8 bits (44), Expect = 1.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -2
Query: 234 MLYGYIVCFSYEFYYCY 184
M YI CF YY Y
Sbjct: 1 MFLAYIACFLLLLYYIY 17
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 21.0 bits (42), Expect = 2.9
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = +2
Query: 236 IWHIDNPCTR 265
+WH++NP R
Sbjct: 22 VWHVENPTYR 31
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 21.0 bits (42), Expect = 2.9
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = +3
Query: 93 HCCNHNVQSAHKRVKHQTAIN 155
H H++ + H V H A N
Sbjct: 324 HHAGHHIHAQHHVVNHHVAAN 344
>DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9
protein.
Length = 383
Score = 20.2 bits (40), Expect = 5.0
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2
Query: 233 MIWHIDNPCTRPLCG 277
M+W +D R +CG
Sbjct: 354 MVWSLDTDDFRGICG 368
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 20.2 bits (40), Expect = 5.0
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2
Query: 233 MIWHIDNPCTRPLCG 277
M+W +D R +CG
Sbjct: 355 MVWSLDTDDFRGICG 369
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 20.2 bits (40), Expect = 5.0
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2
Query: 233 MIWHIDNPCTRPLCG 277
M+W +D R +CG
Sbjct: 355 MVWSLDTDDFRGICG 369
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 19.8 bits (39), Expect = 6.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 81 F*RPHCCNHNVQSAHKR 131
F PH C+ N+QS R
Sbjct: 343 FRMPHRCHGNLQSCPTR 359
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 19.8 bits (39), Expect = 6.6
Identities = 4/13 (30%), Positives = 11/13 (84%)
Frame = +1
Query: 79 FFKDHTVAIIMYK 117
FF+DH + +++++
Sbjct: 52 FFRDHKLLLVLFR 64
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 19.8 bits (39), Expect = 6.6
Identities = 4/13 (30%), Positives = 11/13 (84%)
Frame = +1
Query: 79 FFKDHTVAIIMYK 117
FF+DH + +++++
Sbjct: 52 FFRDHKLLLVLFR 64
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 19.8 bits (39), Expect = 6.6
Identities = 4/13 (30%), Positives = 11/13 (84%)
Frame = +1
Query: 79 FFKDHTVAIIMYK 117
FF+DH + +++++
Sbjct: 52 FFRDHKLLLVLFR 64
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 19.4 bits (38), Expect = 8.7
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +2
Query: 248 DNPCTRPLC 274
DNPCT C
Sbjct: 690 DNPCTTCFC 698
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 19.4 bits (38), Expect = 8.7
Identities = 6/26 (23%), Positives = 16/26 (61%)
Frame = -3
Query: 230 YMVILFVSVMSFTIVMGLECLKTKLV 153
Y++ +FV+V + I++ T+++
Sbjct: 96 YLIFIFVNVFFWVIILMSNYAFTRII 121
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 19.4 bits (38), Expect = 8.7
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = -3
Query: 269 MGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKT 162
+G + RY+ + ++ + V + +V+ LEC T
Sbjct: 148 LGEHWLSRYSWAKVFLVEHILVQTNKLVLALECNNT 183
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 19.4 bits (38), Expect = 8.7
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = -3
Query: 269 MGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKT 162
+G + RY+ + ++ + V + +V+ LEC T
Sbjct: 148 LGEHWLSRYSWAKVFLVEHILVQTNKLVLALECNNT 183
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,573
Number of Sequences: 336
Number of extensions: 1123
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used: 5429307
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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