Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc12c18
         (889 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456475-1|CAG30361.1|  142|Homo sapiens dJ508I15.5 protein.           54   9e-07
BC009363-1|AAH09363.1|  142|Homo sapiens translocase of outer mi...    54   9e-07
AL021707-3|CAI21602.1|  142|Homo sapiens protein ( Human DNA seq...    54   9e-07
AK223021-1|BAD96741.1|  142|Homo sapiens mitochondrial import re...    54   9e-07
AK024731-1|BAB14979.1|  142|Homo sapiens protein ( Homo sapiens ...    54   9e-07
AB041906-1|BAB16408.1|  142|Homo sapiens Tom22 protein.                54   9e-07
AB040119-1|BAB03306.1|  142|Homo sapiens mitochondrial import re...    54   9e-07

>CR456475-1|CAG30361.1|  142|Homo sapiens dJ508I15.5 protein.
          Length = 142

 Score = 53.6 bits (123), Expect = 9e-07
 Identities = 21/49 (42%), Positives = 35/49 (71%)
 Frame = -3

Query: 836 LYGLSRSVMWVVASSSVILFAPVIFEVERAQVAEMEKSQQKQVLLGTNT 690
           +Y  SR+ +W+  +S +IL  PV+FE E+ Q+ + ++ QQ+Q+LLG NT
Sbjct: 77  MYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQILLGPNT 125


>BC009363-1|AAH09363.1|  142|Homo sapiens translocase of outer
           mitochondrial membrane 22 homolog (yeast) protein.
          Length = 142

 Score = 53.6 bits (123), Expect = 9e-07
 Identities = 21/49 (42%), Positives = 35/49 (71%)
 Frame = -3

Query: 836 LYGLSRSVMWVVASSSVILFAPVIFEVERAQVAEMEKSQQKQVLLGTNT 690
           +Y  SR+ +W+  +S +IL  PV+FE E+ Q+ + ++ QQ+Q+LLG NT
Sbjct: 77  MYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQILLGPNT 125


>AL021707-3|CAI21602.1|  142|Homo sapiens protein ( Human DNA
           sequence from clone RP3-508I15 on chromosome 22q12-13.
           ).
          Length = 142

 Score = 53.6 bits (123), Expect = 9e-07
 Identities = 21/49 (42%), Positives = 35/49 (71%)
 Frame = -3

Query: 836 LYGLSRSVMWVVASSSVILFAPVIFEVERAQVAEMEKSQQKQVLLGTNT 690
           +Y  SR+ +W+  +S +IL  PV+FE E+ Q+ + ++ QQ+Q+LLG NT
Sbjct: 77  MYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQILLGPNT 125


>AK223021-1|BAD96741.1|  142|Homo sapiens mitochondrial import
           receptor Tom22 variant protein.
          Length = 142

 Score = 53.6 bits (123), Expect = 9e-07
 Identities = 21/49 (42%), Positives = 35/49 (71%)
 Frame = -3

Query: 836 LYGLSRSVMWVVASSSVILFAPVIFEVERAQVAEMEKSQQKQVLLGTNT 690
           +Y  SR+ +W+  +S +IL  PV+FE E+ Q+ + ++ QQ+Q+LLG NT
Sbjct: 77  MYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQILLGPNT 125


>AK024731-1|BAB14979.1|  142|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21078 fis, clone CAS02162. ).
          Length = 142

 Score = 53.6 bits (123), Expect = 9e-07
 Identities = 21/49 (42%), Positives = 35/49 (71%)
 Frame = -3

Query: 836 LYGLSRSVMWVVASSSVILFAPVIFEVERAQVAEMEKSQQKQVLLGTNT 690
           +Y  SR+ +W+  +S +IL  PV+FE E+ Q+ + ++ QQ+Q+LLG NT
Sbjct: 77  MYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQILLGPNT 125


>AB041906-1|BAB16408.1|  142|Homo sapiens Tom22 protein.
          Length = 142

 Score = 53.6 bits (123), Expect = 9e-07
 Identities = 21/49 (42%), Positives = 35/49 (71%)
 Frame = -3

Query: 836 LYGLSRSVMWVVASSSVILFAPVIFEVERAQVAEMEKSQQKQVLLGTNT 690
           +Y  SR+ +W+  +S +IL  PV+FE E+ Q+ + ++ QQ+Q+LLG NT
Sbjct: 77  MYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQILLGPNT 125


>AB040119-1|BAB03306.1|  142|Homo sapiens mitochondrial import
           receptor Tom22 protein.
          Length = 142

 Score = 53.6 bits (123), Expect = 9e-07
 Identities = 21/49 (42%), Positives = 35/49 (71%)
 Frame = -3

Query: 836 LYGLSRSVMWVVASSSVILFAPVIFEVERAQVAEMEKSQQKQVLLGTNT 690
           +Y  SR+ +W+  +S +IL  PV+FE E+ Q+ + ++ QQ+Q+LLG NT
Sbjct: 77  MYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQILLGPNT 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,187,674
Number of Sequences: 237096
Number of extensions: 2100136
Number of successful extensions: 3302
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3301
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)