Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12c16
(842 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M90422-1|AAA28741.1| 270|Drosophila melanogaster p40 protein. 331 8e-91
M77133-1|AAA28667.1| 253|Drosophila melanogaster laminin recept... 331 8e-91
BT029094-1|ABJ17027.1| 270|Drosophila melanogaster IP12946p pro... 331 8e-91
AY118899-1|AAM50759.1| 270|Drosophila melanogaster LD09376p pro... 331 8e-91
AL031027-8|CAA19839.1| 270|Drosophila melanogaster EG:80H7.6,FB... 331 8e-91
AE014298-225|AAN09049.1| 270|Drosophila melanogaster CG14792-PB... 331 8e-91
AE014298-224|AAF45638.2| 270|Drosophila melanogaster CG14792-PA... 331 8e-91
AE014298-223|AAN09050.2| 313|Drosophila melanogaster CG14792-PD... 331 8e-91
AY118848-1|AAM50708.1| 92|Drosophila melanogaster GM15484p pro... 48 2e-05
BT012492-1|AAS93763.1| 301|Drosophila melanogaster LD03460p pro... 32 1.1
BT003264-1|AAO25021.1| 334|Drosophila melanogaster LD22345p pro... 32 1.1
AY051619-1|AAK93043.1| 334|Drosophila melanogaster GH26634p pro... 32 1.1
AE014296-14|AAS64919.1| 334|Drosophila melanogaster CG6845-PB, ... 32 1.1
AE014296-13|AAF47333.2| 480|Drosophila melanogaster CG6845-PA, ... 32 1.1
AY070554-1|AAL48025.1| 771|Drosophila melanogaster LD30968p pro... 30 4.6
AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p pro... 30 4.6
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r... 30 4.6
AE014297-1946|AAF55136.1| 1332|Drosophila melanogaster CG6752-PA... 30 4.6
AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,... 30 4.6
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,... 30 4.6
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,... 30 4.6
AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-P... 29 6.0
AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-P... 29 6.0
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 25 8.5
>M90422-1|AAA28741.1| 270|Drosophila melanogaster p40 protein.
Length = 270
Score = 331 bits (813), Expect = 8e-91
Identities = 152/193 (78%), Positives = 169/193 (87%)
Frame = -3
Query: 840 AENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRA 661
+ENVNFQME YVYKRRADG +++NL +TWEKL LAARA+VAI+NP+D+FVISSRP GQRA
Sbjct: 27 SENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRA 86
Query: 660 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIA 481
VLKFA +T TPIAGRFTPGAFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA
Sbjct: 87 VLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIA 146
Query: 480 LCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRD 301
NTDSPLR++DIAIPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRD
Sbjct: 147 FTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRD 206
Query: 300 PEESEKDEQQAKE 262
PEE+EK+E AKE
Sbjct: 207 PEEAEKEEAAAKE 219
>M77133-1|AAA28667.1| 253|Drosophila melanogaster laminin receptor
protein.
Length = 253
Score = 331 bits (813), Expect = 8e-91
Identities = 152/193 (78%), Positives = 169/193 (87%)
Frame = -3
Query: 840 AENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRA 661
+ENVNFQME YVYKRRADG +++NL +TWEKL LAARA+VAI+NP+D+FVISSRP GQRA
Sbjct: 10 SENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRA 69
Query: 660 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIA 481
VLKFA +T TPIAGRFTPGAFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA
Sbjct: 70 VLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIA 129
Query: 480 LCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRD 301
NTDSPLR++DIAIPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRD
Sbjct: 130 FTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRD 189
Query: 300 PEESEKDEQQAKE 262
PEE+EK+E AKE
Sbjct: 190 PEEAEKEEAAAKE 202
>BT029094-1|ABJ17027.1| 270|Drosophila melanogaster IP12946p
protein.
Length = 270
Score = 331 bits (813), Expect = 8e-91
Identities = 152/193 (78%), Positives = 169/193 (87%)
Frame = -3
Query: 840 AENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRA 661
+ENVNFQME YVYKRRADG +++NL +TWEKL LAARA+VAI+NP+D+FVISSRP GQRA
Sbjct: 27 SENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRA 86
Query: 660 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIA 481
VLKFA +T TPIAGRFTPGAFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA
Sbjct: 87 VLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIA 146
Query: 480 LCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRD 301
NTDSPLR++DIAIPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRD
Sbjct: 147 FTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRD 206
Query: 300 PEESEKDEQQAKE 262
PEE+EK+E AKE
Sbjct: 207 PEEAEKEEAAAKE 219
>AY118899-1|AAM50759.1| 270|Drosophila melanogaster LD09376p
protein.
Length = 270
Score = 331 bits (813), Expect = 8e-91
Identities = 152/193 (78%), Positives = 169/193 (87%)
Frame = -3
Query: 840 AENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRA 661
+ENVNFQME YVYKRRADG +++NL +TWEKL LAARA+VAI+NP+D+FVISSRP GQRA
Sbjct: 27 SENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRA 86
Query: 660 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIA 481
VLKFA +T TPIAGRFTPGAFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA
Sbjct: 87 VLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIA 146
Query: 480 LCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRD 301
NTDSPLR++DIAIPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRD
Sbjct: 147 FTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRD 206
Query: 300 PEESEKDEQQAKE 262
PEE+EK+E AKE
Sbjct: 207 PEEAEKEEAAAKE 219
>AL031027-8|CAA19839.1| 270|Drosophila melanogaster
EG:80H7.6,FBgn0003517;sta protein.
Length = 270
Score = 331 bits (813), Expect = 8e-91
Identities = 152/193 (78%), Positives = 169/193 (87%)
Frame = -3
Query: 840 AENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRA 661
+ENVNFQME YVYKRRADG +++NL +TWEKL LAARA+VAI+NP+D+FVISSRP GQRA
Sbjct: 27 SENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRA 86
Query: 660 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIA 481
VLKFA +T TPIAGRFTPGAFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA
Sbjct: 87 VLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIA 146
Query: 480 LCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRD 301
NTDSPLR++DIAIPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRD
Sbjct: 147 FTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRD 206
Query: 300 PEESEKDEQQAKE 262
PEE+EK+E AKE
Sbjct: 207 PEEAEKEEAAAKE 219
>AE014298-225|AAN09049.1| 270|Drosophila melanogaster CG14792-PB,
isoform B protein.
Length = 270
Score = 331 bits (813), Expect = 8e-91
Identities = 152/193 (78%), Positives = 169/193 (87%)
Frame = -3
Query: 840 AENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRA 661
+ENVNFQME YVYKRRADG +++NL +TWEKL LAARA+VAI+NP+D+FVISSRP GQRA
Sbjct: 27 SENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRA 86
Query: 660 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIA 481
VLKFA +T TPIAGRFTPGAFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA
Sbjct: 87 VLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIA 146
Query: 480 LCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRD 301
NTDSPLR++DIAIPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRD
Sbjct: 147 FTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRD 206
Query: 300 PEESEKDEQQAKE 262
PEE+EK+E AKE
Sbjct: 207 PEEAEKEEAAAKE 219
>AE014298-224|AAF45638.2| 270|Drosophila melanogaster CG14792-PA,
isoform A protein.
Length = 270
Score = 331 bits (813), Expect = 8e-91
Identities = 152/193 (78%), Positives = 169/193 (87%)
Frame = -3
Query: 840 AENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRA 661
+ENVNFQME YVYKRRADG +++NL +TWEKL LAARA+VAI+NP+D+FVISSRP GQRA
Sbjct: 27 SENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRA 86
Query: 660 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIA 481
VLKFA +T TPIAGRFTPGAFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA
Sbjct: 87 VLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIA 146
Query: 480 LCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRD 301
NTDSPLR++DIAIPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRD
Sbjct: 147 FTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRD 206
Query: 300 PEESEKDEQQAKE 262
PEE+EK+E AKE
Sbjct: 207 PEEAEKEEAAAKE 219
>AE014298-223|AAN09050.2| 313|Drosophila melanogaster CG14792-PD,
isoform D protein.
Length = 313
Score = 331 bits (813), Expect = 8e-91
Identities = 152/193 (78%), Positives = 169/193 (87%)
Frame = -3
Query: 840 AENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRA 661
+ENVNFQME YVYKRRADG +++NL +TWEKL LAARA+VAI+NP+D+FVISSRP GQRA
Sbjct: 70 SENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRA 129
Query: 660 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIA 481
VLKFA +T TPIAGRFTPGAFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA
Sbjct: 130 VLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIA 189
Query: 480 LCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRD 301
NTDSPLR++DIAIPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRD
Sbjct: 190 FTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRD 249
Query: 300 PEESEKDEQQAKE 262
PEE+EK+E AKE
Sbjct: 250 PEEAEKEEAAAKE 262
>AY118848-1|AAM50708.1| 92|Drosophila melanogaster GM15484p
protein.
Length = 92
Score = 47.6 bits (108), Expect = 2e-05
Identities = 27/50 (54%), Positives = 28/50 (56%)
Frame = +2
Query: 689 MTNTSAGFSMXXXXXXXXXSFSQVRRKLITWVPSARRL*TXVSIWKLTFS 838
MT S G SM SFSQV +L PSARRL T SIWKLTFS
Sbjct: 1 MTKMSEGLSMATMARAASCSFSQVLPRLRMLTPSARRLYTYCSIWKLTFS 50
>BT012492-1|AAS93763.1| 301|Drosophila melanogaster LD03460p
protein.
Length = 301
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -2
Query: 745 CSGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRC 599
CS CS C+S C R L + R+ C T C+ C H +C
Sbjct: 210 CSCCSSCQSTERCTICGRSLTLSNRNPCDTPGCKGVYCGKCFEKSHNKC 258
>BT003264-1|AAO25021.1| 334|Drosophila melanogaster LD22345p
protein.
Length = 334
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -2
Query: 745 CSGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRC 599
CS CS C+S C R L + R+ C T C+ C H +C
Sbjct: 243 CSCCSSCQSTERCTICGRSLTLSNRNPCDTPGCKGVYCGKCFEKSHNKC 291
>AY051619-1|AAK93043.1| 334|Drosophila melanogaster GH26634p
protein.
Length = 334
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -2
Query: 745 CSGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRC 599
CS CS C+S C R L + R+ C T C+ C H +C
Sbjct: 243 CSCCSSCQSTERCTICGRSLTLSNRNPCDTPGCKGVYCGKCFEKSHNKC 291
>AE014296-14|AAS64919.1| 334|Drosophila melanogaster CG6845-PB,
isoform B protein.
Length = 334
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -2
Query: 745 CSGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRC 599
CS CS C+S C R L + R+ C T C+ C H +C
Sbjct: 243 CSCCSSCQSTERCTICGRSLTLSNRNPCDTPGCKGVYCGKCFEKSHNKC 291
>AE014296-13|AAF47333.2| 480|Drosophila melanogaster CG6845-PA,
isoform A protein.
Length = 480
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -2
Query: 745 CSGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRC 599
CS CS C+S C R L + R+ C T C+ C H +C
Sbjct: 389 CSCCSSCQSTERCTICGRSLTLSNRNPCDTPGCKGVYCGKCFEKSHNKC 437
>AY070554-1|AAL48025.1| 771|Drosophila melanogaster LD30968p
protein.
Length = 771
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -2
Query: 538 CTRPSTHY*SFICQH-SC-DCFVQHRLPTKICGHC 440
C +P T + C+H SC DC +QH + +K+C +C
Sbjct: 708 CAKPITAVFT-PCKHQSCSDCIMQHMMNSKVCFYC 741
>AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p
protein.
Length = 1022
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 87 LVPGQTILLEQGVLQKQELQRVQQ 158
L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 695 LSPGQTIVTQRNVPQSQALQMVQQ 718
>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
remodeling factor largesubunit NURF301 protein.
Length = 2669
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 87 LVPGQTILLEQGVLQKQELQRVQQ 158
L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 1832 LSPGQTIVTQRNVPQSQALQMVQQ 1855
>AE014297-1946|AAF55136.1| 1332|Drosophila melanogaster CG6752-PA
protein.
Length = 1332
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -2
Query: 538 CTRPSTHY*SFICQH-SC-DCFVQHRLPTKICGHC 440
C +P T + C+H SC DC +QH + +K+C +C
Sbjct: 1269 CAKPITAVFT-PCKHQSCSDCIMQHMMNSKVCFYC 1302
>AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,
isoform C protein.
Length = 2159
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 87 LVPGQTILLEQGVLQKQELQRVQQ 158
L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 1832 LSPGQTIVTQRNVPQSQALQMVQQ 1855
>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
isoform A protein.
Length = 2669
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 87 LVPGQTILLEQGVLQKQELQRVQQ 158
L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 1832 LSPGQTIVTQRNVPQSQALQMVQQ 1855
>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
isoform B protein.
Length = 2649
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 87 LVPGQTILLEQGVLQKQELQRVQQ 158
L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 1812 LSPGQTIVTQRNVPQSQALQMVQQ 1835
>AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-PB,
isoform B protein.
Length = 2922
Score = 29.5 bits (63), Expect = 6.0
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -2
Query: 154 CTRCSSCFWSTPCSRRMVCPGTR*VE-HNCRRT-SRRHRSA 38
C +CSS F++ P +R++CP V CR+ R+H +
Sbjct: 2627 CIQCSSGFFARPKQKRLICPDCGSVTCAQCRKPWERQHEGS 2667
>AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-PA,
isoform A protein.
Length = 2594
Score = 29.5 bits (63), Expect = 6.0
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -2
Query: 154 CTRCSSCFWSTPCSRRMVCPGTR*VE-HNCRRT-SRRHRSA 38
C +CSS F++ P +R++CP V CR+ R+H +
Sbjct: 2299 CIQCSSGFFARPKQKRLICPDCGSVTCAQCRKPWERQHEGS 2339
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 24.6 bits (51), Expect(2) = 8.5
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 700 CVRHLITALRSACCTEVCRAHRCYAYCGT 614
CVRH A AC + CR C CG+
Sbjct: 12874 CVRHSDCASNKACQQQKCR-DPCPGTCGS 12901
Score = 22.2 bits (45), Expect(2) = 8.5
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 502 CQHSCDCFVQHRLPTKIC 449
C + DC V + LPT C
Sbjct: 12899 CGSNADCSVTNHLPTCTC 12916
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,131,259
Number of Sequences: 53049
Number of extensions: 861450
Number of successful extensions: 2327
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2327
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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