Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12c07
(866 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 25 0.90
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 24 2.1
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 24 2.1
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 8.4
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 8.4
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 8.4
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 8.4
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 8.4
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 8.4
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 8.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 8.4
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 8.4
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 8.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 8.4
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 22 8.4
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 25.0 bits (52), Expect = 0.90
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = -3
Query: 234 FDIHNHRSDNNIPKSPKIVIKYLSDKNVNFFKSITLVDDLPTNNYAYDFYVKVKRCPTPV 55
F +H +N IP+ K I+ L FF + + Y YD + V V
Sbjct: 36 FSVHQVYPENLIPRLAKKAIQVLGVTEKEFFDQMGVHFVGFVGQYGYDRVLSV--LGRHV 93
Query: 54 RDWHNYHEQIIDNLIEY 4
RD+ N +DNL EY
Sbjct: 94 RDFLNG----LDNLHEY 106
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -3
Query: 243 KFVFDIHNHRSDNNIPKSPKIVIKYLSDKNVNFFKSITLVDDL 115
+ V D +R+DNNI + I + KN ++I L D L
Sbjct: 251 RVVTDTIKYRNDNNIVRPDFINMLMELQKNPQKLENIKLTDSL 293
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 560 KDSLLRETTL*CGNRNHSLRN 622
K SLL+E T+ C H L+N
Sbjct: 379 KQSLLKENTVTCQEAMHMLKN 399
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -3
Query: 795 CNDPHLCKIIENNYNY 748
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -3
Query: 795 CNDPHLCKIIENNYNY 748
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -3
Query: 795 CNDPHLCKIIENNYNY 748
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -3
Query: 795 CNDPHLCKIIENNYNY 748
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -3
Query: 795 CNDPHLCKIIENNYNY 748
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -3
Query: 795 CNDPHLCKIIENNYNY 748
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -3
Query: 795 CNDPHLCKIIENNYNY 748
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 8.4
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +3
Query: 201 YCCRIDDCECQ 233
+CC D C+C+
Sbjct: 748 HCCDFDACDCE 758
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 530 NTTTCGNPHVKDSL 571
NT C NP+ +DSL
Sbjct: 106 NTKNCVNPYDRDSL 119
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 740 KYLKRPPTTCATSGTI 693
K + PP CA SG+I
Sbjct: 309 KSITEPPKNCADSGSI 324
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 593 CGNRNHSLRNEYIG 634
CGN +H N+++G
Sbjct: 1598 CGNFDHDSTNDFVG 1611
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.8 bits (44), Expect = 8.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 363 LPNRRLASSVLHDLYCHTTTRLK 431
L LAS V ++++C TT K
Sbjct: 149 LMGANLASEVANEMFCETTIGCK 171
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,408
Number of Sequences: 438
Number of extensions: 5981
Number of successful extensions: 49
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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