Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12b18
(418 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070675-1|AAL48146.1| 124|Drosophila melanogaster RH11203p pro... 151 5e-37
AE014296-1846|AAF50138.2| 124|Drosophila melanogaster CG6463-PA... 151 5e-37
M81795-1|AAA28483.1| 1301|Drosophila melanogaster phosphotyrosin... 27 7.6
M80539-1|AAA28485.1| 1231|Drosophila melanogaster receptor-linke... 27 7.6
M80464-1|AAA28486.1| 1231|Drosophila melanogaster protein-tyrosi... 27 7.6
AE014297-4377|AAX53004.1| 1058|Drosophila melanogaster CG2005-PD... 27 7.6
AE014297-4376|AAF56891.3| 1226|Drosophila melanogaster CG2005-PA... 27 7.6
AE014297-4375|AAN14172.1| 1297|Drosophila melanogaster CG2005-PB... 27 7.6
AE014297-4374|AAS65222.1| 1241|Drosophila melanogaster CG2005-PC... 27 7.6
AE014297-4373|AAF56889.2| 1433|Drosophila melanogaster CG2005-PE... 27 7.6
BT003314-1|AAO25074.1| 1430|Drosophila melanogaster GH02877p pro... 27 10.0
BT003270-1|AAO25027.1| 926|Drosophila melanogaster LD20211p pro... 27 10.0
AY069361-1|AAL39506.1| 513|Drosophila melanogaster LD06532p pro... 27 10.0
AE014296-66|AAF47366.1| 926|Drosophila melanogaster CG7008-PA p... 27 10.0
AE014134-1127|AAF52414.2| 1430|Drosophila melanogaster CG11098-P... 27 10.0
>AY070675-1|AAL48146.1| 124|Drosophila melanogaster RH11203p
protein.
Length = 124
Score = 151 bits (365), Expect = 5e-37
Identities = 65/104 (62%), Positives = 80/104 (76%)
Frame = -3
Query: 344 AVAANPHHTLGALYGKILRTLQKMPETSVYRKYTEQIVRERAAVLTQTKDSFEIEKKINC 165
AV+ NPHHTL ALYGKILR + KMP+ + YRKYTEQ+V++RA + Q KD +EK + C
Sbjct: 15 AVSTNPHHTLSALYGKILRAVSKMPQDASYRKYTEQLVKQRADSVAQHKDITALEKAVGC 74
Query: 164 GQAEELIIQAENELNLARKMLNWKPWEPLMAKPPKGQWEWPPSK 33
GQ EELI+QAENEL LARKML WKPWE L+ P QW+WPP++
Sbjct: 75 GQVEELIVQAENELILARKMLGWKPWEKLVQAAPAKQWDWPPAQ 118
>AE014296-1846|AAF50138.2| 124|Drosophila melanogaster CG6463-PA
protein.
Length = 124
Score = 151 bits (365), Expect = 5e-37
Identities = 65/104 (62%), Positives = 80/104 (76%)
Frame = -3
Query: 344 AVAANPHHTLGALYGKILRTLQKMPETSVYRKYTEQIVRERAAVLTQTKDSFEIEKKINC 165
AV+ NPHHTL ALYGKILR + KMP+ + YRKYTEQ+V++RA + Q KD +EK + C
Sbjct: 15 AVSTNPHHTLSALYGKILRAVSKMPQDASYRKYTEQLVKQRADSVAQHKDITALEKAVGC 74
Query: 164 GQAEELIIQAENELNLARKMLNWKPWEPLMAKPPKGQWEWPPSK 33
GQ EELI+QAENEL LARKML WKPWE L+ P QW+WPP++
Sbjct: 75 GQVEELIVQAENELILARKMLGWKPWEKLVQAAPAKQWDWPPAQ 118
>M81795-1|AAA28483.1| 1301|Drosophila melanogaster phosphotyrosine
phosphatase protein.
Length = 1301
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 245 TEQIVRERAAVLTQTKDSFEIEKKINCGQAEELIIQAENELNLA 114
T ++ + VL + +S I+ + NC + + L+ Q+ N+ NLA
Sbjct: 351 TFSVINPKKIVLGKFSESRIIQLQPNCEKLQPLLRQSHNDYNLA 394
>M80539-1|AAA28485.1| 1231|Drosophila melanogaster receptor-linked
protein tyrosinephosphatase protein.
Length = 1231
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 245 TEQIVRERAAVLTQTKDSFEIEKKINCGQAEELIIQAENELNLA 114
T ++ + VL + +S I+ + NC + + L+ Q+ N+ NLA
Sbjct: 351 TFSVINPKKIVLGKFSESRIIQLQPNCEKLQPLLRQSHNDYNLA 394
>M80464-1|AAA28486.1| 1231|Drosophila melanogaster protein-tyrosine
phosphatase protein.
Length = 1231
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 245 TEQIVRERAAVLTQTKDSFEIEKKINCGQAEELIIQAENELNLA 114
T ++ + VL + +S I+ + NC + + L+ Q+ N+ NLA
Sbjct: 351 TFSVINPKKIVLGKFSESRIIQLQPNCEKLQPLLRQSHNDYNLA 394
>AE014297-4377|AAX53004.1| 1058|Drosophila melanogaster CG2005-PD,
isoform D protein.
Length = 1058
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 245 TEQIVRERAAVLTQTKDSFEIEKKINCGQAEELIIQAENELNLA 114
T ++ + VL + +S I+ + NC + + L+ Q+ N+ NLA
Sbjct: 351 TFSVINPKKIVLGKFSESRIIQLQPNCEKLQPLLRQSHNDYNLA 394
>AE014297-4376|AAF56891.3| 1226|Drosophila melanogaster CG2005-PA,
isoform A protein.
Length = 1226
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 245 TEQIVRERAAVLTQTKDSFEIEKKINCGQAEELIIQAENELNLA 114
T ++ + VL + +S I+ + NC + + L+ Q+ N+ NLA
Sbjct: 351 TFSVINPKKIVLGKFSESRIIQLQPNCEKLQPLLRQSHNDYNLA 394
>AE014297-4375|AAN14172.1| 1297|Drosophila melanogaster CG2005-PB,
isoform B protein.
Length = 1297
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 245 TEQIVRERAAVLTQTKDSFEIEKKINCGQAEELIIQAENELNLA 114
T ++ + VL + +S I+ + NC + + L+ Q+ N+ NLA
Sbjct: 351 TFSVINPKKIVLGKFSESRIIQLQPNCEKLQPLLRQSHNDYNLA 394
>AE014297-4374|AAS65222.1| 1241|Drosophila melanogaster CG2005-PC,
isoform C protein.
Length = 1241
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 245 TEQIVRERAAVLTQTKDSFEIEKKINCGQAEELIIQAENELNLA 114
T ++ + VL + +S I+ + NC + + L+ Q+ N+ NLA
Sbjct: 366 TFSVINPKKIVLGKFSESRIIQLQPNCEKLQPLLRQSHNDYNLA 409
>AE014297-4373|AAF56889.2| 1433|Drosophila melanogaster CG2005-PE,
isoform E protein.
Length = 1433
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 245 TEQIVRERAAVLTQTKDSFEIEKKINCGQAEELIIQAENELNLA 114
T ++ + VL + +S I+ + NC + + L+ Q+ N+ NLA
Sbjct: 558 TFSVINPKKIVLGKFSESRIIQLQPNCEKLQPLLRQSHNDYNLA 601
>BT003314-1|AAO25074.1| 1430|Drosophila melanogaster GH02877p protein.
Length = 1430
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3
Query: 248 YTEQIVRERAAVLTQTKDSFEIEKKINCGQAEELIIQAENELNLARKM 105
+TE R + + T +D++E+E + + Q IQAE E LA+ +
Sbjct: 966 FTEATTRLNSELKTLQEDNYELEMEKSKLQTRLQEIQAETESELAKAL 1013
>BT003270-1|AAO25027.1| 926|Drosophila melanogaster LD20211p
protein.
Length = 926
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/44 (22%), Positives = 22/44 (50%)
Frame = -3
Query: 299 KILRTLQKMPETSVYRKYTEQIVRERAAVLTQTKDSFEIEKKIN 168
KI K + +++ Y E++ +E+ + +D E+K+N
Sbjct: 658 KIAEDRAKAAKKNIWTNYVEEVPKEKTVTEEEKEDKVVAERKVN 701
>AY069361-1|AAL39506.1| 513|Drosophila melanogaster LD06532p
protein.
Length = 513
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/44 (22%), Positives = 22/44 (50%)
Frame = -3
Query: 299 KILRTLQKMPETSVYRKYTEQIVRERAAVLTQTKDSFEIEKKIN 168
KI K + +++ Y E++ +E+ + +D E+K+N
Sbjct: 245 KIAEDRAKAAKKNIWTNYVEEVPKEKTVTEEEKEDKVVAERKVN 288
>AE014296-66|AAF47366.1| 926|Drosophila melanogaster CG7008-PA
protein.
Length = 926
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/44 (22%), Positives = 22/44 (50%)
Frame = -3
Query: 299 KILRTLQKMPETSVYRKYTEQIVRERAAVLTQTKDSFEIEKKIN 168
KI K + +++ Y E++ +E+ + +D E+K+N
Sbjct: 658 KIAEDRAKAAKKNIWTNYVEEVPKEKTVTEEEKEDKVVAERKVN 701
>AE014134-1127|AAF52414.2| 1430|Drosophila melanogaster CG11098-PA,
isoform A protein.
Length = 1430
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3
Query: 248 YTEQIVRERAAVLTQTKDSFEIEKKINCGQAEELIIQAENELNLARKM 105
+TE R + + T +D++E+E + + Q IQAE E LA+ +
Sbjct: 966 FTEATTRLNSELKTLQEDNYELEMEKSKLQTRLQEIQAETESELAKAL 1013
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,524,013
Number of Sequences: 53049
Number of extensions: 293082
Number of successful extensions: 1013
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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