Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc12b07
         (253 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    27   0.080
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   2.3  
AY062201-1|AAL58562.1|  151|Anopheles gambiae cytochrome P450 CY...    21   6.9  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     21   9.1  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 27.5 bits (58), Expect = 0.080
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 201 SIFKKNYNNVKVASYIEVPYTTNNADVEMTDTT 103
           S+  K+  NV + S+    YTT+N D   TD T
Sbjct: 391 SLTDKDAINVHIRSFFSELYTTDNTDNTQTDDT 423


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = -2

Query: 174 VKVASYIEVPYTTNNADVEMTDTTNAPSRPKSKARRRLDFTNMAPQPCCID 22
           V V  +   P  T  + +  + ++ +PS P S A      +NM+P+    D
Sbjct: 48  VSVGEFTLGPGRTYASALSPSSSSASPSSPSSVASPNSRASNMSPESSASD 98


>AY062201-1|AAL58562.1|  151|Anopheles gambiae cytochrome P450
           CYP4D22 protein.
          Length = 151

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 252 DHTMERYHPYQRAPWNA 202
           D TME+  PY   P+ A
Sbjct: 127 DRTMEQSSPYAYVPFTA 143


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = -2

Query: 108 TTNAPSRPKSKARRRLDFTNMAPQPCCIDD 19
           T N PS+P+ + +   +  N    P    D
Sbjct: 531 TQNGPSQPQPQQQNPFNLLNFGTLPLATGD 560


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 273,972
Number of Sequences: 2352
Number of extensions: 4492
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 13179690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)