Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12b04
(851 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089288-1|AAL90026.1| 598|Drosophila melanogaster AT08391p pro... 31 1.5
AE014296-3315|AAF49042.1| 598|Drosophila melanogaster CG17122-P... 31 1.5
AY071207-1|AAL48829.2| 195|Drosophila melanogaster RE25242p pro... 31 2.0
AE013599-2493|AAF57848.2| 195|Drosophila melanogaster CG11419-P... 31 2.0
U35621-1|AAB82065.1| 1148|Drosophila melanogaster CNN protein. 31 2.7
BT021269-1|AAX33417.1| 1130|Drosophila melanogaster RE46972p pro... 31 2.7
BT010053-1|AAQ22522.1| 1148|Drosophila melanogaster LD19135p pro... 31 2.7
AE013599-1716|AAF58376.2| 1320|Drosophila melanogaster CG4832-PC... 31 2.7
AE013599-1715|AAX52706.1| 1090|Drosophila melanogaster CG4832-PD... 31 2.7
AE013599-1714|ABC66061.1| 1130|Drosophila melanogaster CG4832-PE... 31 2.7
AE013599-1713|AAM68579.1| 1120|Drosophila melanogaster CG4832-PB... 31 2.7
AE013599-1712|AAF58375.1| 1148|Drosophila melanogaster CG4832-PA... 31 2.7
S76155-1|AAB33383.1| 1385|Drosophila melanogaster tlr protein. 30 4.6
L23171-1|AAA79208.1| 1389|Drosophila melanogaster wheeler protein. 30 4.6
DQ138938-1|ABA86544.1| 1374|Drosophila melanogaster CG8896 protein. 30 4.6
AE014297-1358|AAF54682.3| 895|Drosophila melanogaster CG6834-PA... 30 4.6
AE013599-2964|AAF57509.1| 1385|Drosophila melanogaster CG8896-PA... 30 4.6
AY113442-1|AAM29447.1| 803|Drosophila melanogaster RE28849p pro... 29 6.1
AY089552-1|AAL90290.1| 1253|Drosophila melanogaster LD30834p pro... 29 6.1
AY071446-1|AAL49068.1| 803|Drosophila melanogaster RE52979p pro... 29 6.1
AE014297-2213|AAF55319.2| 1298|Drosophila melanogaster CG14896-P... 29 6.1
AY075577-1|AAL68382.1| 1489|Drosophila melanogaster SD05887p pro... 29 8.1
AE013599-3585|AAF46990.2| 1489|Drosophila melanogaster CG3493-PA... 29 8.1
>AY089288-1|AAL90026.1| 598|Drosophila melanogaster AT08391p
protein.
Length = 598
Score = 31.5 bits (68), Expect = 1.5
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -3
Query: 213 KLAFVLGQERHFRKRKMRFEDDMEVL-YDGVHPNPLLAIQCINEKLYDKHYKIRKIAKR- 40
K+ + G R++ K K ++ +EVL Y + + L A +C N K D K+R +AKR
Sbjct: 265 KIKIIEGLTRNYEKLKAKY---VEVLRYKKAYESLLQAEKCENVKQKDAAGKLRTLAKRM 321
Query: 39 -VIDVD 25
++D+D
Sbjct: 322 EILDLD 327
>AE014296-3315|AAF49042.1| 598|Drosophila melanogaster CG17122-PA
protein.
Length = 598
Score = 31.5 bits (68), Expect = 1.5
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -3
Query: 213 KLAFVLGQERHFRKRKMRFEDDMEVL-YDGVHPNPLLAIQCINEKLYDKHYKIRKIAKR- 40
K+ + G R++ K K ++ +EVL Y + + L A +C N K D K+R +AKR
Sbjct: 265 KIKIIEGLTRNYEKLKAKY---VEVLRYKKAYESLLQAEKCENVKQKDAAGKLRTLAKRM 321
Query: 39 -VIDVD 25
++D+D
Sbjct: 322 EILDLD 327
>AY071207-1|AAL48829.2| 195|Drosophila melanogaster RE25242p
protein.
Length = 195
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 729 GLEIAHDDILDCNWDSD-QVYHLNEIIFHKQ 640
G+E D+I+D W SD Q+ HL I FHK+
Sbjct: 49 GVERLRDNIMDTYWQSDGQLPHLVNIQFHKR 79
>AE013599-2493|AAF57848.2| 195|Drosophila melanogaster CG11419-PA
protein.
Length = 195
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 729 GLEIAHDDILDCNWDSD-QVYHLNEIIFHKQ 640
G+E D+I+D W SD Q+ HL I FHK+
Sbjct: 49 GVERLRDNIMDTYWQSDGQLPHLVNIQFHKR 79
>U35621-1|AAB82065.1| 1148|Drosophila melanogaster CNN protein.
Length = 1148
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -3
Query: 579 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 400
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 329 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 383
Query: 399 NRFE-QFELRLNELDAKLNMLQSAEKLKTA 313
++EL++NE + K+ LQ+ K KTA
Sbjct: 384 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 413
>BT021269-1|AAX33417.1| 1130|Drosophila melanogaster RE46972p
protein.
Length = 1130
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -3
Query: 579 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 400
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 311 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 365
Query: 399 NRFE-QFELRLNELDAKLNMLQSAEKLKTA 313
++EL++NE + K+ LQ+ K KTA
Sbjct: 366 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 395
>BT010053-1|AAQ22522.1| 1148|Drosophila melanogaster LD19135p
protein.
Length = 1148
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -3
Query: 579 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 400
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 329 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 383
Query: 399 NRFE-QFELRLNELDAKLNMLQSAEKLKTA 313
++EL++NE + K+ LQ+ K KTA
Sbjct: 384 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 413
>AE013599-1716|AAF58376.2| 1320|Drosophila melanogaster CG4832-PC,
isoform C protein.
Length = 1320
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -3
Query: 579 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 400
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 501 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 555
Query: 399 NRFE-QFELRLNELDAKLNMLQSAEKLKTA 313
++EL++NE + K+ LQ+ K KTA
Sbjct: 556 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 585
>AE013599-1715|AAX52706.1| 1090|Drosophila melanogaster CG4832-PD,
isoform D protein.
Length = 1090
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -3
Query: 579 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 400
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 271 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 325
Query: 399 NRFE-QFELRLNELDAKLNMLQSAEKLKTA 313
++EL++NE + K+ LQ+ K KTA
Sbjct: 326 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 355
>AE013599-1714|ABC66061.1| 1130|Drosophila melanogaster CG4832-PE,
isoform E protein.
Length = 1130
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -3
Query: 579 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 400
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 311 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 365
Query: 399 NRFE-QFELRLNELDAKLNMLQSAEKLKTA 313
++EL++NE + K+ LQ+ K KTA
Sbjct: 366 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 395
>AE013599-1713|AAM68579.1| 1120|Drosophila melanogaster CG4832-PB,
isoform B protein.
Length = 1120
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -3
Query: 579 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 400
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 301 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 355
Query: 399 NRFE-QFELRLNELDAKLNMLQSAEKLKTA 313
++EL++NE + K+ LQ+ K KTA
Sbjct: 356 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 385
>AE013599-1712|AAF58375.1| 1148|Drosophila melanogaster CG4832-PA,
isoform A protein.
Length = 1148
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -3
Query: 579 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 400
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 329 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 383
Query: 399 NRFE-QFELRLNELDAKLNMLQSAEKLKTA 313
++EL++NE + K+ LQ+ K KTA
Sbjct: 384 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 413
>S76155-1|AAB33383.1| 1385|Drosophila melanogaster tlr protein.
Length = 1385
Score = 29.9 bits (64), Expect = 4.6
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 717 QFQDLCKNLLHCRILRSCRCARICT*NCAC 806
+++ C HC C C IC NC+C
Sbjct: 736 KYESHCPPTCHCCEYEQCECEVICPGNCSC 765
>L23171-1|AAA79208.1| 1389|Drosophila melanogaster wheeler protein.
Length = 1389
Score = 29.9 bits (64), Expect = 4.6
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 717 QFQDLCKNLLHCRILRSCRCARICT*NCAC 806
+++ C HC C C IC NC+C
Sbjct: 736 KYESHCPPTCHCCEYEQCECEVICPGNCSC 765
>DQ138938-1|ABA86544.1| 1374|Drosophila melanogaster CG8896 protein.
Length = 1374
Score = 29.9 bits (64), Expect = 4.6
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 717 QFQDLCKNLLHCRILRSCRCARICT*NCAC 806
+++ C HC C C IC NC+C
Sbjct: 729 KYESHCPPTCHCCEYEQCECEVICPGNCSC 758
>AE014297-1358|AAF54682.3| 895|Drosophila melanogaster CG6834-PA
protein.
Length = 895
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 1 LFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHFHVVFKAHFSLA 177
LF I++++H+DY YF F+ E L+ + H++ H S A
Sbjct: 350 LFYLILTSVHIDYKLDYFEYFIRHYHEQLTQHLDLLGFTGKQPSLRELHMLMYKHGSWA 408
>AE013599-2964|AAF57509.1| 1385|Drosophila melanogaster CG8896-PA
protein.
Length = 1385
Score = 29.9 bits (64), Expect = 4.6
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 717 QFQDLCKNLLHCRILRSCRCARICT*NCAC 806
+++ C HC C C IC NC+C
Sbjct: 736 KYESHCPPTCHCCEYEQCECEVICPGNCSC 765
>AY113442-1|AAM29447.1| 803|Drosophila melanogaster RE28849p
protein.
Length = 803
Score = 29.5 bits (63), Expect = 6.1
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +1
Query: 1 LFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHFHVVFKAHFSLA 177
LF I++++H+DY YF F+ E L + H++ H S A
Sbjct: 258 LFYLILTSVHIDYKLDYFEYFIRHYHEQLTQHLGLLGFTGKQPSLRELHMLMYKHGSWA 316
>AY089552-1|AAL90290.1| 1253|Drosophila melanogaster LD30834p
protein.
Length = 1253
Score = 29.5 bits (63), Expect = 6.1
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = -3
Query: 513 ERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQS 334
E +D +K+E H+K +NT+ K V T N++ N + L E+ K ++
Sbjct: 452 ETEDASEKLEKAEDHLKAINTDG-KLAVVLPTTSNEIDNTNTEIVADL-EIKPKRRARKA 509
Query: 333 AEKLKTAIVTESKNGTV 283
+ K +T ++ K TV
Sbjct: 510 SAK-ETNTTSDKKEKTV 525
>AY071446-1|AAL49068.1| 803|Drosophila melanogaster RE52979p
protein.
Length = 803
Score = 29.5 bits (63), Expect = 6.1
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +1
Query: 1 LFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHFHVVFKAHFSLA 177
LF I++++H+DY YF F+ E L + H++ H S A
Sbjct: 258 LFYLILTSVHIDYKLDYFEYFIRHYHEQLTQHLGLLGFTGKQPSLRELHMLMYKHGSWA 316
>AE014297-2213|AAF55319.2| 1298|Drosophila melanogaster CG14896-PA
protein.
Length = 1298
Score = 29.5 bits (63), Expect = 6.1
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = -3
Query: 513 ERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQS 334
E +D +K+E H+K +NT+ K V T N++ N + L E+ K ++
Sbjct: 497 ETEDASEKLEKAEDHLKAINTDG-KLAVVLPTTSNEIDNTNTEIVADL-EIKPKRRARKA 554
Query: 333 AEKLKTAIVTESKNGTV 283
+ K +T ++ K TV
Sbjct: 555 SAK-ETNTTSDKKEKTV 570
>AY075577-1|AAL68382.1| 1489|Drosophila melanogaster SD05887p
protein.
Length = 1489
Score = 29.1 bits (62), Expect = 8.1
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = -3
Query: 549 KSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRL 370
+ N LL QT + + ++E V+KL ++ E+ N+V +F++ +
Sbjct: 312 EENVLLLAQT---KQAIHTELELKDTEVRKLQEKLKQLESQRESHNNEVKEQFKKLQATK 368
Query: 369 NELDAKL 349
E+DAKL
Sbjct: 369 QEVDAKL 375
>AE013599-3585|AAF46990.2| 1489|Drosophila melanogaster CG3493-PA
protein.
Length = 1489
Score = 29.1 bits (62), Expect = 8.1
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = -3
Query: 549 KSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRL 370
+ N LL QT + + ++E V+KL ++ E+ N+V +F++ +
Sbjct: 312 EENVLLLAQT---KQAIHTELELKDTEVRKLQEKLKQLESQRESHNNEVKEQFKKLQATK 368
Query: 369 NELDAKL 349
E+DAKL
Sbjct: 369 QEVDAKL 375
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,608,895
Number of Sequences: 53049
Number of extensions: 823636
Number of successful extensions: 2487
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2487
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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