Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12a16
(478 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p pro... 215 3e-56
AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal pr... 215 3e-56
AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC... 215 3e-56
AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB... 215 3e-56
AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA... 215 3e-56
X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal prot... 214 5e-56
AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p pro... 176 1e-44
AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB... 176 1e-44
AY061282-1|AAL28830.1| 378|Drosophila melanogaster LD20087p pro... 28 7.5
AE014134-264|AAF51367.2| 378|Drosophila melanogaster CG7420-PA ... 28 7.5
BT029113-1|ABJ17046.1| 563|Drosophila melanogaster IP15113p pro... 27 9.9
BT012454-1|AAS93725.1| 902|Drosophila melanogaster RE64461p pro... 27 9.9
BT009944-1|AAQ22413.1| 1374|Drosophila melanogaster SD04152p pro... 27 9.9
AY069737-1|AAL39882.1| 1015|Drosophila melanogaster LP05501p pro... 27 9.9
AY051905-1|AAK93329.1| 824|Drosophila melanogaster LD39491p pro... 27 9.9
AY036105-1|AAK63171.1| 1321|Drosophila melanogaster zinc finger/... 27 9.9
AY036104-1|AAK63170.1| 975|Drosophila melanogaster zinc finger/... 27 9.9
AF281146-1|AAK06386.1| 825|Drosophila melanogaster AF10 protein. 27 9.9
AF281145-1|AAK06385.1| 1376|Drosophila melanogaster AF10 protein. 27 9.9
AF217960-1|AAF72595.1| 1323|Drosophila melanogaster Alhambra pro... 27 9.9
AF145672-1|AAD38647.1| 1189|Drosophila melanogaster BcDNA.GH1217... 27 9.9
AE014297-559|AAF54065.2| 824|Drosophila melanogaster CG1070-PB,... 27 9.9
AE014297-558|AAN13343.1| 1323|Drosophila melanogaster CG1070-PD,... 27 9.9
AE014297-557|AAF54062.3| 1376|Drosophila melanogaster CG1070-PA,... 27 9.9
AE014297-556|AAN13342.1| 976|Drosophila melanogaster CG1070-PC,... 27 9.9
AE013599-184|AAF57363.1| 1688|Drosophila melanogaster CG3274-PA ... 27 9.9
>AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p
protein.
Length = 156
Score = 215 bits (524), Expect = 3e-56
Identities = 99/148 (66%), Positives = 120/148 (81%)
Frame = -3
Query: 452 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 273
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60
Query: 272 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 93
LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++ ARKALQ+LE +LVEK DGG
Sbjct: 61 LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120
Query: 92 RILTTQGRRDLDRIAAQVRLKAKQQAKQ 9
R L++ G+RDLDRIA Q+ K + AKQ
Sbjct: 121 RKLSSIGQRDLDRIANQIVFKQRDAAKQ 148
>AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal
protein S19 protein.
Length = 156
Score = 215 bits (524), Expect = 3e-56
Identities = 99/148 (66%), Positives = 120/148 (81%)
Frame = -3
Query: 452 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 273
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60
Query: 272 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 93
LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++ ARKALQ+LE +LVEK DGG
Sbjct: 61 LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120
Query: 92 RILTTQGRRDLDRIAAQVRLKAKQQAKQ 9
R L++ G+RDLDRIA Q+ K + AKQ
Sbjct: 121 RKLSSIGQRDLDRIANQIVFKQRDAAKQ 148
>AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC,
isoform C protein.
Length = 156
Score = 215 bits (524), Expect = 3e-56
Identities = 99/148 (66%), Positives = 120/148 (81%)
Frame = -3
Query: 452 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 273
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60
Query: 272 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 93
LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++ ARKALQ+LE +LVEK DGG
Sbjct: 61 LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120
Query: 92 RILTTQGRRDLDRIAAQVRLKAKQQAKQ 9
R L++ G+RDLDRIA Q+ K + AKQ
Sbjct: 121 RKLSSIGQRDLDRIANQIVFKQRDAAKQ 148
>AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB,
isoform B protein.
Length = 156
Score = 215 bits (524), Expect = 3e-56
Identities = 99/148 (66%), Positives = 120/148 (81%)
Frame = -3
Query: 452 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 273
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60
Query: 272 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 93
LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++ ARKALQ+LE +LVEK DGG
Sbjct: 61 LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120
Query: 92 RILTTQGRRDLDRIAAQVRLKAKQQAKQ 9
R L++ G+RDLDRIA Q+ K + AKQ
Sbjct: 121 RKLSSIGQRDLDRIANQIVFKQRDAAKQ 148
>AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA,
isoform A protein.
Length = 156
Score = 215 bits (524), Expect = 3e-56
Identities = 99/148 (66%), Positives = 120/148 (81%)
Frame = -3
Query: 452 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 273
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60
Query: 272 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 93
LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++ ARKALQ+LE +LVEK DGG
Sbjct: 61 LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120
Query: 92 RILTTQGRRDLDRIAAQVRLKAKQQAKQ 9
R L++ G+RDLDRIA Q+ K + AKQ
Sbjct: 121 RKLSSIGQRDLDRIANQIVFKQRDAAKQ 148
>X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal protein
S19 protein.
Length = 156
Score = 214 bits (523), Expect = 5e-56
Identities = 98/148 (66%), Positives = 120/148 (81%)
Frame = -3
Query: 452 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 273
M VTVKD++Q + K VA LKKTGK+KVP+ MD++KTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIIKTAKFKELAPYDPDWFYVRCASI 60
Query: 272 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 93
LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++ ARKALQ+LE +LVEK DGG
Sbjct: 61 LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120
Query: 92 RILTTQGRRDLDRIAAQVRLKAKQQAKQ 9
R L++ G+RDLDRIA Q+ K + AKQ
Sbjct: 121 RKLSSIGQRDLDRIANQIVFKQRDAAKQ 148
>AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p
protein.
Length = 155
Score = 176 bits (428), Expect = 1e-44
Identities = 81/146 (55%), Positives = 107/146 (73%)
Frame = -3
Query: 452 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 273
M VTVK+++Q + K +AA LKK+GK+ VPE +KT +FKE AP D DWFY RCA+I
Sbjct: 1 MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASI 60
Query: 272 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 93
+RH+Y+RSP GV TK++ GRKRNGV PS CRSS RKALQ+LEA +VE+ DGG
Sbjct: 61 MRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGG 120
Query: 92 RILTTQGRRDLDRIAAQVRLKAKQQA 15
R LT QG+R+LDRIA ++ K ++++
Sbjct: 121 RKLTPQGQRNLDRIANKIVAKQRERS 146
>AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB
protein.
Length = 155
Score = 176 bits (428), Expect = 1e-44
Identities = 81/146 (55%), Positives = 107/146 (73%)
Frame = -3
Query: 452 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 273
M VTVK+++Q + K +AA LKK+GK+ VPE +KT +FKE AP D DWFY RCA+I
Sbjct: 1 MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASI 60
Query: 272 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 93
+RH+Y+RSP GV TK++ GRKRNGV PS CRSS RKALQ+LEA +VE+ DGG
Sbjct: 61 MRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGG 120
Query: 92 RILTTQGRRDLDRIAAQVRLKAKQQA 15
R LT QG+R+LDRIA ++ K ++++
Sbjct: 121 RKLTPQGQRNLDRIANKIVAKQRERS 146
>AY061282-1|AAL28830.1| 378|Drosophila melanogaster LD20087p
protein.
Length = 378
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +2
Query: 17 PAAWPLDEPGQRFCQGLVYLVW*ECDHRPELSQQASM--PPTIAKPCVQYCLMTCRNVKV 190
P P +EP QR GL + D++ + + + PP I CL C VK+
Sbjct: 139 PVKLPREEPAQRISFGLRHCAVLTQDNKIYVFGRLRIMDPPPIELDITATCLHRCNTVKI 198
Query: 191 *LH 199
+H
Sbjct: 199 QVH 201
>AE014134-264|AAF51367.2| 378|Drosophila melanogaster CG7420-PA
protein.
Length = 378
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +2
Query: 17 PAAWPLDEPGQRFCQGLVYLVW*ECDHRPELSQQASM--PPTIAKPCVQYCLMTCRNVKV 190
P P +EP QR GL + D++ + + + PP I CL C VK+
Sbjct: 139 PVKLPREEPAQRISFGLRHCAVLTQDNKIYVFGRLRIMDPPPIELDITATCLHRCNTVKI 198
Query: 191 *LH 199
+H
Sbjct: 199 QVH 201
>BT029113-1|ABJ17046.1| 563|Drosophila melanogaster IP15113p
protein.
Length = 563
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 274 SFVIFTFAHLLESRLSPRSSVGANVME-LHLHI 179
S + T AH+L ++++P SSV + E LH+ +
Sbjct: 50 SIITHTAAHMLGNQINPNSSVAQKLSEQLHMEV 82
>BT012454-1|AAS93725.1| 902|Drosophila melanogaster RE64461p
protein.
Length = 902
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 428 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTAR 330
VEQ ++ + +H +K GK+ V HM + R
Sbjct: 699 VEQAELYRIYLSHCQKAGKLSVVNHMQFPRLVR 731
>BT009944-1|AAQ22413.1| 1374|Drosophila melanogaster SD04152p protein.
Length = 1374
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 274 SFVIFTFAHLLESRLSPRSSVGANVME-LHLHI 179
S + T AH+L ++++P SSV + E LH+ +
Sbjct: 1202 SIITHTAAHMLGNQINPNSSVAQKLSEQLHMEV 1234
>AY069737-1|AAL39882.1| 1015|Drosophila melanogaster LP05501p
protein.
Length = 1015
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 274 SFVIFTFAHLLESRLSPRSSVGANVME-LHLHI 179
S + T AH+L ++++P SSV + E LH+ +
Sbjct: 843 SIITHTAAHMLGNQINPNSSVAQKLSEQLHMEV 875
>AY051905-1|AAK93329.1| 824|Drosophila melanogaster LD39491p
protein.
Length = 824
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 274 SFVIFTFAHLLESRLSPRSSVGANVME-LHLHI 179
S + T AH+L ++++P SSV + E LH+ +
Sbjct: 652 SIITHTAAHMLGNQINPNSSVAQKLSEQLHMEV 684
>AY036105-1|AAK63171.1| 1321|Drosophila melanogaster zinc
finger/leucine zipper proteinDALF isoform C3 protein.
Length = 1321
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 274 SFVIFTFAHLLESRLSPRSSVGANVME-LHLHI 179
S + T AH+L ++++P SSV + E LH+ +
Sbjct: 1150 SIITHTAAHMLGNQINPNSSVAQKLSEQLHMEV 1182
>AY036104-1|AAK63170.1| 975|Drosophila melanogaster zinc
finger/leucine zipper proteinDALF isoform C1 protein.
Length = 975
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 274 SFVIFTFAHLLESRLSPRSSVGANVME-LHLHI 179
S + T AH+L ++++P SSV + E LH+ +
Sbjct: 652 SIITHTAAHMLGNQINPNSSVAQKLSEQLHMEV 684
>AF281146-1|AAK06386.1| 825|Drosophila melanogaster AF10 protein.
Length = 825
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 274 SFVIFTFAHLLESRLSPRSSVGANVME-LHLHI 179
S + T AH+L ++++P SSV + E LH+ +
Sbjct: 653 SIITHTAAHMLGNQINPNSSVAQKLSEQLHMEV 685
>AF281145-1|AAK06385.1| 1376|Drosophila melanogaster AF10 protein.
Length = 1376
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 274 SFVIFTFAHLLESRLSPRSSVGANVME-LHLHI 179
S + T AH+L ++++P SSV + E LH+ +
Sbjct: 1204 SIITHTAAHMLGNQINPNSSVAQKLSEQLHMEV 1236
>AF217960-1|AAF72595.1| 1323|Drosophila melanogaster Alhambra protein.
Length = 1323
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 274 SFVIFTFAHLLESRLSPRSSVGANVME-LHLHI 179
S + T AH+L ++++P SSV + E LH+ +
Sbjct: 1151 SIITHTAAHMLGNQINPNSSVAQKLSEQLHMEV 1183
>AF145672-1|AAD38647.1| 1189|Drosophila melanogaster BcDNA.GH12174
protein.
Length = 1189
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 428 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTAR 330
VEQ ++ + +H +K GK+ V HM + R
Sbjct: 200 VEQAELYRIYLSHCQKAGKLSVVNHMQFPRLVR 232
>AE014297-559|AAF54065.2| 824|Drosophila melanogaster CG1070-PB,
isoform B protein.
Length = 824
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 274 SFVIFTFAHLLESRLSPRSSVGANVME-LHLHI 179
S + T AH+L ++++P SSV + E LH+ +
Sbjct: 652 SIITHTAAHMLGNQINPNSSVAQKLSEQLHMEV 684
>AE014297-558|AAN13343.1| 1323|Drosophila melanogaster CG1070-PD,
isoform D protein.
Length = 1323
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 274 SFVIFTFAHLLESRLSPRSSVGANVME-LHLHI 179
S + T AH+L ++++P SSV + E LH+ +
Sbjct: 1151 SIITHTAAHMLGNQINPNSSVAQKLSEQLHMEV 1183
>AE014297-557|AAF54062.3| 1376|Drosophila melanogaster CG1070-PA,
isoform A protein.
Length = 1376
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 274 SFVIFTFAHLLESRLSPRSSVGANVME-LHLHI 179
S + T AH+L ++++P SSV + E LH+ +
Sbjct: 1204 SIITHTAAHMLGNQINPNSSVAQKLSEQLHMEV 1236
>AE014297-556|AAN13342.1| 976|Drosophila melanogaster CG1070-PC,
isoform C protein.
Length = 976
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 274 SFVIFTFAHLLESRLSPRSSVGANVME-LHLHI 179
S + T AH+L ++++P SSV + E LH+ +
Sbjct: 652 SIITHTAAHMLGNQINPNSSVAQKLSEQLHMEV 684
>AE013599-184|AAF57363.1| 1688|Drosophila melanogaster CG3274-PA
protein.
Length = 1688
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 428 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTAR 330
VEQ ++ + +H +K GK+ V HM + R
Sbjct: 699 VEQAELYRIYLSHCQKAGKLSVVNHMQFPRLVR 731
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,531,719
Number of Sequences: 53049
Number of extensions: 443837
Number of successful extensions: 1073
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -