Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12a14
(843 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 76 4e-14
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 72 6e-13
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 68 7e-12
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 68 1e-11
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 67 2e-11
Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 53 3e-07
Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical ... 43 3e-04
Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z78412-8|CAB01653.1| 400|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical pr... 35 0.063
AF285179-1|AAG15377.1| 706|Caenorhabditis elegans zygote defect... 33 0.34
AF003386-12|AAB54253.2| 706|Caenorhabditis elegans Zygote defec... 33 0.34
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 32 0.59
AF024500-2|AAB70360.1| 467|Caenorhabditis elegans Hypothetical ... 31 0.78
AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical ... 31 1.4
Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF077534-5|AAN60512.1| 102|Caenorhabditis elegans Hypothetical ... 30 2.4
Z54342-4|CAA91150.1| 447|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical p... 29 4.1
AF077546-7|AAC26319.1| 534|Caenorhabditis elegans Hypothetical ... 29 4.1
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 29 4.1
AF039051-6|AAB94266.2| 448|Caenorhabditis elegans Hypothetical ... 29 5.5
Z71259-1|CAA95789.1| 360|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical pr... 28 9.5
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 28 9.5
AF039051-4|AAB94264.1| 539|Caenorhabditis elegans Hypothetical ... 28 9.5
AC006611-1|AAK85455.2| 348|Caenorhabditis elegans Vacuolar h at... 28 9.5
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 75.8 bits (178), Expect = 4e-14
Identities = 63/190 (33%), Positives = 93/190 (48%), Gaps = 9/190 (4%)
Frame = -1
Query: 840 ISAGYDKIAVVNYAEAQKSLDKIFLMTYDFKGAWSNTDLGYQTTVYAPS-----WNSEEL 676
I AGYD + N A + D I LM+YDF GAW++ +G+ + +YA + WN
Sbjct: 226 IDAGYD---IPNLAP---NFDFILLMSYDFFGAWASL-VGFNSPLYATTELPAEWNG--- 275
Query: 675 YTTHYAVDALLEQGVDPNKIIVGVAMYGRGWTGVTNYTNGNYFSGTGNGPVSGTW---ED 505
+ + ++G+ KIIVG+ YGRGWT + N + N GT P T E
Sbjct: 276 WNVDSSARYWNQKGMPKEKIIVGMPTYGRGWT-LNNASAIN--PGTSGSPAKITQYVQEA 332
Query: 504 GVVDYRQIQKDLNNYVYTF-DSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGG 328
GV Y + + L N + DS +Q Y+ ++ S+D +S K+ YV R GG
Sbjct: 333 GVGAYFEFCEMLANGATRYWDSQSQVPYLVQGNQW--WSYDDEESFANKMAYVKREGYGG 390
Query: 327 LFAWEIDADN 298
F W +D D+
Sbjct: 391 AFVWTLDFDD 400
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical protein
T01C4.1 protein.
Length = 1484
Score = 71.7 bits (168), Expect = 6e-13
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 7/194 (3%)
Frame = -1
Query: 831 GYDKIAVVNYAEAQKSLDKIFLMTYDFKGAWSNTDLGYQTTVYAPSWNSEELYTTHYAVD 652
GYD ++NYA D I +MTYD+ GAW + Y T + S + ++ D
Sbjct: 1131 GYDLKGILNYA------DFINVMTYDYYGAWESKWGAYTGTPAPLYFGSLKGFSGKLNAD 1184
Query: 651 ALLE----QGVDPNKIIVGVAMYGRGWTGVTNYTNGNYFSGTGNGPVSGTWEDGVVDYRQ 484
++ P+++ +GV YGR W V + + P +G +E G V +R
Sbjct: 1185 FSMKFYACNTKKPSQLTMGVPFYGRYWKNVLEPIDASDNMWRTAAPQNGKYEGGYVGWRN 1244
Query: 483 IQKD-LNNYVYTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEID 307
++K+ N T+ + Y+ + + F++ S+ K+ Y LGGL W +D
Sbjct: 1245 LEKEGWNKGSATWHKKTKTPYIMNNGARMFLGFENERSLKEKMDYATNRNLGGLMIWALD 1304
Query: 306 ADN--GDLLNAMNA 271
D+ LLN +++
Sbjct: 1305 LDDDADTLLNLVSS 1318
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 68.1 bits (159), Expect = 7e-12
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Frame = -1
Query: 798 EAQKSLDKIFLMTYDFKGAWSNTDLGYQTTVYAP-SWNSEELYTTHYAVDALLE----QG 634
+ K D + +M+YD+ GAW++ G T AP + + ++ V A ++ Q
Sbjct: 204 QLMKYCDFVNVMSYDYFGAWASK-WGAYTGPPAPLQFAMPKKFSGRMNVHATMKDYSCQI 262
Query: 633 VDPNKIIVGVAMYGRGWTGV---TNYTNGNYFSGTGNGPVSGTWEDGVVDYRQIQKDLNN 463
+KI +GV YGR W V + T+ + + T +E G V +R + + +
Sbjct: 263 KATDKINMGVPFYGRFWKNVGDAVDSTDDMWRTATATNSEGTKFEGGDVQWRDLHEKFDT 322
Query: 462 YVYTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN--GDL 289
F S ++ +++ + + +++ +S+ KV Y+ N +GG+ W ID D+ G L
Sbjct: 323 TKTKFHSGSKTPFIWLSEQKTFVGYENAESLKHKVDYIVENNIGGVMIWAIDFDDDQGTL 382
Query: 288 LNAMNAQ 268
LN+ A+
Sbjct: 383 LNSAAAE 389
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 67.7 bits (158), Expect = 1e-11
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 7/194 (3%)
Frame = -1
Query: 831 GYDKIAVVNYAEAQKSLDKIFLMTYDFKGAWSNTDLGYQTTVYAPSWNSEELYTTHYAVD 652
GYD ++ YA D I +MTYD+ GAW + Y T + S + ++ D
Sbjct: 1668 GYDLKGILKYA------DFINVMTYDYYGAWESKWGAYTGTPAPLYFGSLKGFSGKLNAD 1721
Query: 651 ALLE----QGVDPNKIIVGVAMYGRGWTGVTNYTNGNYFSGTGNGPVSGTWEDGVVDYRQ 484
++ + P+++ +GV YGR W V + + P +G +E G V +R
Sbjct: 1722 FSMKFYACKTEKPSQLNMGVPFYGRYWKNVLGPIDKSDNMWRTAAPQNGKYEGGYVGWRN 1781
Query: 483 IQKD-LNNYVYTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEID 307
+ K+ N ++ + Y+ + + F++ S+ K+KY LGGL W +D
Sbjct: 1782 LAKEGWNKGSASWHEKTKTPYIMNNGAKKFLGFENERSLKEKMKYATDRNLGGLMIWALD 1841
Query: 306 ADN--GDLLNAMNA 271
D+ LLN +++
Sbjct: 1842 LDDDADTLLNLVSS 1855
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 66.9 bits (156), Expect = 2e-11
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Frame = -1
Query: 798 EAQKSLDKIFLMTYDFKGAWSNTDLGYQTTVYAP---SWNSEELYTTHYAVDALLEQGVD 628
E + +D + + + DF G W+N G T AP + + + + H+ + +E+ D
Sbjct: 222 EIIEHVDFLNVHSMDFAGPWAN-QYGVPTGPSAPMCGGFGARKNFNVHHTMKYYVEKIED 280
Query: 627 PNKIIVGVAMYGRGWTGVTNYTNGNYFSGTGNGPVSG-TWEDGVVDYRQIQKD--LNNYV 457
P+K+ + + Y R W V + N V+G + + +K L+
Sbjct: 281 PSKLNLVIPFYARRWEHVKESLDSNTEVFRNADLVNGIAVGEPYISRWSAEKTHGLSLGS 340
Query: 456 YTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN--GDLLN 283
+D+ + S+++DK+K ++ +S S+ K KYV KLGG++ W +D D+ G LLN
Sbjct: 341 TNWDTETKTSFLWDKNKNTFVTLESDRSIREKKKYVCDMKLGGVWIWTVDMDDSAGSLLN 400
Query: 282 AMNAQ 268
A +A+
Sbjct: 401 ASSAR 405
Score = 48.8 bits (111), Expect = 5e-06
Identities = 19/58 (32%), Positives = 36/58 (62%)
Frame = -1
Query: 450 FDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGDLLNAM 277
+D + SY+++ +L++F++ S+ K KY+ R +GG+ W +D D+G LL A+
Sbjct: 742 WDETTKTSYIWNPETKELLTFETDRSINEKTKYIKRVNIGGVCLWAVDMDDGTLLEAV 799
>Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.1 protein.
Length = 432
Score = 57.6 bits (133), Expect = 1e-08
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Frame = -1
Query: 831 GYDKIAVVNYAEAQKSLDKIFLMTYDFKGAWSNTDLGYQTTVYAPSWNSEELYTTHYAVD 652
GYD ++++ +D + + + D+ G W N G T AP N H+ VD
Sbjct: 230 GYDLDEIIDH------IDFMNVYSMDYSGPWDNK-WGTPTGPSAPM-NYNIGPRKHFTVD 281
Query: 651 ALLEQGV----DPNKIIVGVAMYGRGWTGV----TNYTNGNYFSGTGNGPVSGTWEDGVV 496
++ PNK + + Y R W V T T + NG G D +
Sbjct: 282 WTMKYYACKTRQPNKFNIVIPFYARIWRSVGEAITLKTEVFRNAKLINGKADG---DPYI 338
Query: 495 DYRQI-QKDLNNYVYTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFA 319
+ QK + + Y++D+A ++SY++ + ++F++ S+ K++YV+ LGG++
Sbjct: 339 SRLSVKQKGIELFPYSWDNATKSSYIWKPKEKTFLTFENERSIEKKLQYVNEMNLGGVWI 398
Query: 318 WEIDADN--GDLLNAMNA 271
W +D D+ LL+A+++
Sbjct: 399 WSVDMDDRINTLLDAVSS 416
>Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical
protein C08H9.6 protein.
Length = 394
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Frame = -1
Query: 627 PNKIIVGVAMYGRGWTGVTNYTNGN----YFSGTGNGPVSGTWEDGVVDYRQIQKDLNNY 460
P+ + +GV G W GV + N + NGP + +R+ KD N
Sbjct: 249 PSILNMGVTFTGIFWNGVKDGLNEQDDIWKVAQNENGPGKS------IGWRKFIKDRRNT 302
Query: 459 VYTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGD--LL 286
+ + ++++SY +D ++F++ S+ KV YV +GGL W +D D+ D LL
Sbjct: 303 IPQWHDSSKSSYAWDPKSKIFLAFENEKSLSEKVIYVRNKNIGGLVIWNVDQDDNDNSLL 362
Query: 285 NAMNA 271
NA+ +
Sbjct: 363 NALTS 367
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 52.8 bits (121), Expect = 3e-07
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Frame = -1
Query: 630 DPNKIIVGVAMYGRGWTGVTNYTNGNYFSGTGNGPVSG-TWEDGVVDYRQIQKD--LNNY 460
DP+K+ + + Y R W V + N V+G + + +K L+
Sbjct: 257 DPSKLNLVIPFYARRWEHVKESLDSNTEVFRNADLVNGIAVGEPYISRWSAEKTHGLSLG 316
Query: 459 VYTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN--GDLL 286
+D+ + S+++DK+K ++ +S S+ K KYV KLGG++ W +D D+ G LL
Sbjct: 317 STNWDTETKTSFLWDKNKNTFVTLESDRSIREKKKYVCDMKLGGVWIWTVDMDDSAGSLL 376
Query: 285 NAMNAQ 268
NA +A+
Sbjct: 377 NASSAR 382
Score = 48.8 bits (111), Expect = 5e-06
Identities = 19/58 (32%), Positives = 36/58 (62%)
Frame = -1
Query: 450 FDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGDLLNAM 277
+D + SY+++ +L++F++ S+ K KY+ R +GG+ W +D D+G LL A+
Sbjct: 689 WDETTKTSYIWNPETKELLTFETDRSINEKTKYIKRVNIGGVCLWAVDMDDGTLLEAV 746
>Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical
protein T19H5.1 protein.
Length = 445
Score = 52.0 bits (119), Expect = 5e-07
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 7/177 (3%)
Frame = -1
Query: 783 LDKIFLMTYDFKGAWSNTDLGYQTTVYAPSWNS---EELYTTHYAVDALLEQGVDPNKII 613
+D I + + D+ G N D G T AP +N E + + L + + NK
Sbjct: 238 VDFINVFSLDYYGPTQN-DFGKITGPTAPMFNGVPGRETFNVDHTSKVLSCETMQSNKFN 296
Query: 612 VGVAMYGRGWTGVTNYTNGNYFSGTGNGPVSGTWEDGVVDYRQI--QKDLNNYVYTFDSA 439
+ + Y W V + N V G R I QK Y+FD+A
Sbjct: 297 IAIPFYTTLWENVQGPIDKIEIFRNVN-KVHGKIVGQSHMSRMIVQQKGFVLTPYSFDNA 355
Query: 438 AQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN--GDLLNAMN 274
+ +++++ S ++F++ S++ K++YV + LGG+ W +D D+ LNA++
Sbjct: 356 TRNAFIYNSSTKIYLTFETDQSIVAKIEYVSEHLLGGICIWTVDKDDEGNSQLNAIS 412
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 50.8 bits (116), Expect = 1e-06
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 9/182 (4%)
Frame = -1
Query: 816 AVVNYAEAQKSLDKIFLMTYDFKGAWSN-----TDLGYQTTVYAPSWNSEELYTTHYAVD 652
A +N ++D + + T + G W N T Q Y H++V
Sbjct: 165 AGINITSIVNNVDFLNIFTMGYFGPWPNPKGMITGATSQLFYGVNGVLGRRNYNIHHSVQ 224
Query: 651 ALLEQGVDPNKIIVGVAMYGRGWTGVTNYTNGN----YFSGTGNGPVSGTWEDGVVDYRQ 484
+ + + NK + + Y W V N Y + T NG V G +Q
Sbjct: 225 SYVCKTDQSNKYNIAIPFYTMLWKHVQGPINPPNIEIYRNATFNGTVFGEANMSRKLVQQ 284
Query: 483 IQKDLNNYVYTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDA 304
DL++ TF+S +A++ ++ + ++F++ D++ K+ YV LGG++ W +D
Sbjct: 285 EGYDLSHP--TFNSEIRAAFKYNATTETFLTFETNDTIAAKIDYVKDRILGGVWIWGVDM 342
Query: 303 DN 298
D+
Sbjct: 343 DD 344
>Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical
protein M01B2.6 protein.
Length = 450
Score = 46.8 bits (106), Expect = 2e-05
Identities = 33/173 (19%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Frame = -1
Query: 798 EAQKSLDKIFLMTYDFKGAWSN---TDLGYQTTVYAPSWNSEELYTTHYAVDALLEQGVD 628
E +++D I + D+ G W++ G + +Y S E+ + A E +
Sbjct: 250 EIVENVDFINIFAMDYYGPWASGWGNPTGPISPIYGGSERREQWNVDNTAAIYSCET-MR 308
Query: 627 PNKIIVGVAMYGRGWTGV---TNYTNGNYFSGTGNGPVSGTWEDGVVDYRQIQKDLNNYV 457
+K + + + R W V ++ + E + +QK N
Sbjct: 309 SSKFNIVIPFFARLWNNVGKPIDFPGKEVYRNVTLIDGKAVGEVYMPRRSALQKGYNLSS 368
Query: 456 YTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 298
Y +D ++ +++++ + + ++F+ S+ K+ YV LGG++ W++D D+
Sbjct: 369 YNYDDLSETAFIYNSTTKEYLTFEVKRSIAAKLDYVQNMNLGGVWIWQMDMDD 421
>Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical
protein R09D1.8 protein.
Length = 446
Score = 46.4 bits (105), Expect = 3e-05
Identities = 39/183 (21%), Positives = 80/183 (43%), Gaps = 12/183 (6%)
Frame = -1
Query: 786 SLDKIFLMTYDFKGAWSNTDLGYQTTVYAPSWNS------EELYTTHYAVDALLEQGVDP 625
++D + + T + G W N D G T + +N + Y H++ + + +
Sbjct: 252 NVDFLNIFTMGYFGPWQN-DAGMITGAASQLFNGVNGVPGRKTYNIHHSTERYVCKTGQS 310
Query: 624 NKIIVGVAMYGRGWTGVTNYTNGNYFSGTGNGPVSGTWEDGVVDYRQIQKDL---NNYVY 454
+K + + Y W V N N T++ GVV + + L Y +
Sbjct: 311 DKYNIAIPFYTMLWKHVKGPVNPPNIEIYRNA----TFQGGVVGETSMSRKLVQEEGYDF 366
Query: 453 ---TFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGDLLN 283
T++ +A++ ++ + ++F++ D++ K+ YV LGG++ W +D D+ D N
Sbjct: 367 SNPTYNPEIRAAFKYNATTETFLTFETNDTIAAKIDYVKDRILGGVWIWAVDMDD-DSNN 425
Query: 282 AMN 274
+N
Sbjct: 426 LLN 428
>Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical
protein R09D1.6 protein.
Length = 444
Score = 46.4 bits (105), Expect = 3e-05
Identities = 39/183 (21%), Positives = 80/183 (43%), Gaps = 12/183 (6%)
Frame = -1
Query: 786 SLDKIFLMTYDFKGAWSNTDLGYQTTVYAPSWNS------EELYTTHYAVDALLEQGVDP 625
++D + + T + G W N D G T + +N + Y H++ + + +
Sbjct: 250 NVDFLNIFTMGYFGPWQN-DAGMITGAASQLFNGVNGVPGRKTYNIHHSTERYVCKTGQS 308
Query: 624 NKIIVGVAMYGRGWTGVTNYTNGNYFSGTGNGPVSGTWEDGVVDYRQIQKDL---NNYVY 454
+K + + Y W V N N T++ GVV + + L Y +
Sbjct: 309 DKYNIAIPFYTMLWKHVKGPVNPPNIEIYRNA----TFQGGVVGETSMSRKLVQEEGYDF 364
Query: 453 ---TFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGDLLN 283
T++ +A++ ++ + ++F++ D++ K+ YV LGG++ W +D D+ D N
Sbjct: 365 SNPTYNPEIRAAFKYNATTETFLTFETNDTIAAKIDYVKDRILGGVWIWAVDMDD-DSNN 423
Query: 282 AMN 274
+N
Sbjct: 424 LLN 426
>Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.13 protein.
Length = 459
Score = 44.0 bits (99), Expect = 1e-04
Identities = 34/174 (19%), Positives = 75/174 (43%), Gaps = 3/174 (1%)
Frame = -1
Query: 783 LDKIFLMTYDFKGAWSNTDLGYQTTVYAPSWNSEELYTTHYAVDALLEQGVDPNKIIVGV 604
+D + ++TY + WS + G AP + + L+ + P+K+ + +
Sbjct: 273 VDFLNVLTYGYYAPWSGVN-GKFVGPNAPLYGGNR-ENVDETMQYLICKTRTPSKLNMAL 330
Query: 603 AMYGRGWTGVTNYTNGNYFSGTGNGPVSGTWEDGVVDYRQIQ-KDLNNYVYTFDSAAQAS 427
+ YGR W V + F ++G + V ++ + + + + Q
Sbjct: 331 SFYGRYWENVNDNVPDEMFKEADL--INGKAQGMFVAWKNLAGRGWDKSEALWHEETQIP 388
Query: 426 YVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDAD--NGDLLNAMNA 271
Y+++ + F++ S+ K+ Y + +GG++ W + AD N LLN +++
Sbjct: 389 YIWNSEERKFFVFENERSLQAKMDYAADHNIGGVYIWALGADDNNDTLLNVVSS 442
>Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical
protein R09D1.5 protein.
Length = 429
Score = 43.2 bits (97), Expect = 2e-04
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 12/199 (6%)
Frame = -1
Query: 783 LDKIFLMTYDFKGAWSNTDLGYQTTVYAPSWNSEELYTTHYAVDALLEQGV----DPNKI 616
+D + + + D+ G W N G T AP + + H+ VD+ ++ DP+K
Sbjct: 237 IDFVNVFSMDYYGPWPN-QWGTPTGPSAPLYGGIGV-KKHFNVDSTMKYYTCMTEDPSKF 294
Query: 615 IVGVAMYGRGWTGVTN-YTNGNYF---SGTGNGPVSGT--WEDGVVDYRQIQKDLNNYVY 454
+ + Y R W V ++G + NG G VD+ + L ++
Sbjct: 295 NMVIPFYVRLWKNVKEPISSGTEVFRRADLKNGAAVGNSYMSRWTVDHEGWE--LTPALW 352
Query: 453 TFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDAD--NGDLLNA 280
D + YV+++ G+ ++F++ S+ K+ Y + LGG++ +D D N +LL A
Sbjct: 353 --DDVTKTPYVWNQETGNFLTFENKKSIEAKLAYAIEHNLGGVWIHLVDKDNENEELLRA 410
Query: 279 MNAQFKLRDEL*KQVSFVC 223
+ ++ E +V++ C
Sbjct: 411 VASKKFCASESENKVTYDC 429
>Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical
protein R09D1.3 protein.
Length = 435
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = -1
Query: 492 YRQIQKDLNNYVYTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWE 313
Y +D+ ++D+A Q YV D ++++ S+ K+ YV++ LGG++ W
Sbjct: 344 YTVEHEDMELSPESWDNATQTPYVLDLKTRTFFTYENEKSIKVKLDYVNKMDLGGVWIWS 403
Query: 312 IDADNGDLLNAM 277
+D D D LN +
Sbjct: 404 VDMD--DRLNTL 413
>AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical
protein T10D4.3 protein.
Length = 410
Score = 42.7 bits (96), Expect = 3e-04
Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 5/165 (3%)
Frame = -1
Query: 756 DFKGAWSNT---DLGYQTTVYAPSWNSEELYTTHYAVDALLEQGVDPNKIIVGVAMYGRG 586
D+ G W N G + +Y P+ ++ + +YA E+ +P K+ + + + R
Sbjct: 228 DYYGPWPNEWGKPTGPISPLYGPTRHNVDWTLRYYA-----EKTGEPGKLNMVIPFFVRL 282
Query: 585 WTGVTNYTNGN--YFSGTGNGPVSGTWEDGVVDYRQIQKDLNNYVYTFDSAAQASYVFDK 412
W V F E + + ++L+ +D ++SY ++
Sbjct: 283 WKNVPEPVEPGRQVFRDVELVDNKPQGEAYMSRWSAQHEELDLSPADWDEETRSSYTWNP 342
Query: 411 SKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGDLLNAM 277
+ ++F++ S+ K+KYV LGG++ W +DA N LL+++
Sbjct: 343 DTRNFVTFETDKSIQEKMKYVKEKNLGGVWIWHVDA-NEKLLDSV 386
>Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical
protein R09D1.2 protein.
Length = 440
Score = 42.3 bits (95), Expect = 4e-04
Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 5/182 (2%)
Frame = -1
Query: 798 EAQKSLDKIFLMTYDFKGAWSNTDLGYQTTVYAP-SWN--SEELYTTHYAVDALLEQGVD 628
E + +D + + + D+ G W N G T AP ++N + + + + +
Sbjct: 248 EIMEHVDFMNVYSMDYSGPWDN-QWGTPTGPSAPLAFNIGPRKNFNVDWTMKYYSCKTQQ 306
Query: 627 PNKIIVGVAMYGRGWTGVTNYTNGNYFSGTGNGPVSGTWEDGVVDYRQIQKDLNNYVYTF 448
P K + + Y R W V + N + DGV + D + ++
Sbjct: 307 PGKFNMVIPFYARYWNNVQEAVDPRT-EVFRNAEIRNNRADGVPYMDRSSADYK--MASW 363
Query: 447 DSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEID-ADNGD-LLNAMN 274
D+ Y++ + +F++ S+ K +Y LGG++ W +D D+G+ LL+A+
Sbjct: 364 DNLTSTPYIWKPDERRFFTFENQKSIAIKTRYAIDMNLGGVWIWSVDMGDHGNVLLSAVA 423
Query: 273 AQ 268
+Q
Sbjct: 424 SQ 425
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 40.3 bits (90), Expect = 0.002
Identities = 14/52 (26%), Positives = 32/52 (61%)
Frame = -1
Query: 453 TFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 298
++D+ + S +++ S ++F++ S+ K++YV LGG++ W +D D+
Sbjct: 326 SWDTLTETSSMYNNSTKTFLAFETEKSIHAKIEYVMNKNLGGVWIWSVDMDD 377
>Z78412-8|CAB01653.1| 400|Caenorhabditis elegans Hypothetical
protein M176.8 protein.
Length = 400
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -1
Query: 453 TFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGDLLNAM 277
++D+ Y+ D ++F+ S+ K Y + LGG++ W +D D D LN++
Sbjct: 322 SWDNLTMTPYILDLKAKTFLTFEDKRSIKIKTDYAKKMDLGGVWLWSVDMD--DRLNSL 378
>Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical
protein C08H9.10 protein.
Length = 457
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -1
Query: 450 FDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGD 292
F + + SY++ ++ + S+ K +YV + +GG+ W ID D+GD
Sbjct: 379 FHNLTKTSYMWIPGSSLFLTLEDEQSLRVKNRYVADHNIGGITMWTIDQDDGD 431
>AF285179-1|AAG15377.1| 706|Caenorhabditis elegans zygote
defective-1 protein.
Length = 706
Score = 32.7 bits (71), Expect = 0.34
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Frame = -3
Query: 811 GKLRRSAKVIRQNISHDLRF*RGLVKHGFGLPNNSLRAKLELGRAVHDTLRCRCVTG--- 641
G+ +RS + +R + R R L++ P +S RA L R +HD + G
Sbjct: 268 GRRQRSREPVRSSRDDRSRDGRALIRSS-SQPAHSGRAPLS-NRPIHDRMPSTSSRGFDS 325
Query: 640 TRRRSQQNNCGRRHVRPRLDRRNKLYEWQLFFRHWQRAGVGHVGGR 503
R R + + GR V P + RN+ W + + V GGR
Sbjct: 326 ERGRERDRDSGRGTVPPSREDRNRSQLWPIRMDRLEGQRVCTAGGR 371
>AF003386-12|AAB54253.2| 706|Caenorhabditis elegans Zygote
defective: embryonic lethalprotein 1 protein.
Length = 706
Score = 32.7 bits (71), Expect = 0.34
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Frame = -3
Query: 811 GKLRRSAKVIRQNISHDLRF*RGLVKHGFGLPNNSLRAKLELGRAVHDTLRCRCVTG--- 641
G+ +RS + +R + R R L++ P +S RA L R +HD + G
Sbjct: 268 GRRQRSREPVRSSRDDRSRDGRALIRSS-SQPAHSGRAPLS-NRPIHDRMPSTSSRGFDS 325
Query: 640 TRRRSQQNNCGRRHVRPRLDRRNKLYEWQLFFRHWQRAGVGHVGGR 503
R R + + GR V P + RN+ W + + V GGR
Sbjct: 326 ERGRERDRDSGRGTVPPSREDRNRSQLWPIRMDRLEGQRVCTAGGR 371
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 31.9 bits (69), Expect = 0.59
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Frame = -1
Query: 627 PNKIIVGVAMYGRGWTG----VTNYTNGNYFS-GTGNGPVSGTWEDGVVDYRQIQKDLNN 463
P+K + V+ +G W G + +Y++ + GP + W RQ +L +
Sbjct: 322 PSKFNIMVSFHGTFWEGAELPLRDYSDDIWKEKNVARGPFAVRWRH----LRQRNWNLTD 377
Query: 462 YVYTFDSAAQASYVFDKSKGD-LISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGD 292
F + + SY++ ++ + S+ K +YV + +GG+ W ID D+ D
Sbjct: 378 I--KFHNLTKTSYIWIPGPPTWFLTLEDEKSLREKNRYVADHNIGGITMWTIDQDDDD 433
>AF024500-2|AAB70360.1| 467|Caenorhabditis elegans Hypothetical
protein K06H6.4 protein.
Length = 467
Score = 31.5 bits (68), Expect = 0.78
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -2
Query: 179 KRIRLPLEIIDTILQYLDPISHAKVVGLTTRVKCRLLRDNNVED 48
+R+ + E T++ YLD I +A + L RVK +++DNN +
Sbjct: 276 ERLEIRNEQFKTVVDYLDSIHNASIANLRFRVKW-VIKDNNTPE 318
>AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical
protein H04J21.1 protein.
Length = 1032
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -1
Query: 534 NGPVSGTWEDGVVDYRQIQKDLNNYVYTFDSAAQASYVFDKSKGDLISFDSVDSVLGKV 358
N V G W + + + I DL+N + DS + DK+ +++ F S+ S LGK+
Sbjct: 432 NDAVDGQWNN-IANALTILNDLDNALKAVDSFL--GFRSDKASTEIVQFQSLSSKLGKL 487
>Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical
protein ZK938.6 protein.
Length = 460
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 396 ISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGD 292
++ + S+ K +YV + +GG+ W ID D+GD
Sbjct: 400 MTLEDEKSLREKNRYVADHNIGGITMWTIDQDDGD 434
>AF077534-5|AAN60512.1| 102|Caenorhabditis elegans Hypothetical
protein K07D4.9 protein.
Length = 102
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 724 GLPNNSLRAKLELGRAVHDTLRCRCVTGTRRRSQQNN 614
GL + R +LE+G + RCRC GT + QQ +
Sbjct: 57 GLLQGTRRKRLEVGNSFSKGGRCRCTDGTCTQFQQRS 93
>Z54342-4|CAA91150.1| 447|Caenorhabditis elegans Hypothetical
protein C08H9.7 protein.
Length = 447
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -1
Query: 483 IQKDLNNYVYTFDSAAQASYVFDKSKGD-LISFDSVDSVLGKVKYVDRNKLGGLFAWEID 307
+Q+ N F + + SY++ ++ + S+ K KYV +GG+ W ID
Sbjct: 357 LQQKWNLEDIKFHNLTKTSYIWIPGPPTWFMTLEDKRSLREKTKYVADYNIGGITMWTID 416
Query: 306 ADNGD 292
D+ D
Sbjct: 417 QDDDD 421
>Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical
protein C08H9.4b protein.
Length = 465
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 450 FDSAAQASYVFDKSKGD-LISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGD 292
F + + SY++ ++ + S+ K +YV + +GG+ W ID D+ D
Sbjct: 386 FHNLTKTSYIWIPGPPTRFLTLEDEQSLREKNRYVADHNIGGITMWTIDQDDDD 439
>AF077546-7|AAC26319.1| 534|Caenorhabditis elegans Hypothetical
protein T08E11.8 protein.
Length = 534
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = -1
Query: 423 VFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGDLLNAMNAQFKLRDEL* 244
V DK+ D+ D + ++L + K+V+ K+ ++ + D D D +N + QFK+ +
Sbjct: 65 VKDKNYIDMACED-LFNILSEAKFVEDLKIRIIYGFG-DVDEVDTVNRVCEQFKIHSQTT 122
Query: 243 KQVSFVCSCY 214
K +V S Y
Sbjct: 123 KSPIYVHSLY 132
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -3
Query: 646 TGTRRRSQQNNCGRRHVRPRLDRRNKLYEWQLFFRHWQRAGVGHVGGRCCRLSSNSKRSQ 467
+G + RS QN G + PR K ++F H Q+ V GG RLS+N + +
Sbjct: 436 SGRQSRSHQNRRGNTNAAPRSGGSGKNTISKMF-EHEQQQVVPSSGGALRRLSANDQNTD 494
Query: 466 QL 461
+
Sbjct: 495 AM 496
>AF039051-6|AAB94266.2| 448|Caenorhabditis elegans Hypothetical
protein C14C6.8 protein.
Length = 448
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 179 KRIRLPLEIIDTILQYLDPISHAKVVGLTTRVKCRLLRDNNVEDY 45
+R+ + E T++ YLD I +A V L RVK + +N Y
Sbjct: 257 ERLEIRNEQFKTVVDYLDSIHNASVANLHFRVKWVMKHNNTPARY 301
>Z71259-1|CAA95789.1| 360|Caenorhabditis elegans Hypothetical
protein F13G3.1 protein.
Length = 360
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +3
Query: 384 CQTKSNRLYFYRKRTTLERRCQTCTHNC*DLFEFDDNLQHRPPTCPTPARC 536
C + S+R KRT RCQ C+ + + ++ H T P RC
Sbjct: 163 CSSDSDRCIISEKRTVFY-RCQLCSFEDERVSVLNSHVSHLHNTSPCVCRC 212
>Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical
protein C08H9.12 protein.
Length = 460
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 450 FDSAAQASYVFDKSKGD-LISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGD 292
F + + SY++ ++ + S+ K +YV + +GG+ W ID D+ D
Sbjct: 381 FHNLTKTSYIWIPGPPTRFMTLEEERSLREKNRYVADHNIGGITMWTIDQDDDD 434
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 248 SSSLSLNCAFIALSKSPLSASISQANKPPNLFRSTYLT 361
+SS+ +A K+PLSAS+S N+P + T L+
Sbjct: 532 TSSVPTTPTGLAAPKTPLSASVSATNEPDSTTNGTPLS 569
>AF039051-4|AAB94264.1| 539|Caenorhabditis elegans Hypothetical
protein C14C6.6 protein.
Length = 539
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 179 KRIRLPLEIIDTILQYLDPISHAKVVGLTTRVKCRLLRDNNVEDY 45
+RI + E T+ YLD I ++ + L RVK L +N Y
Sbjct: 328 ERIEIRSENFKTVTSYLDSIHNSSISNLHFRVKWVLKHNNTPATY 372
>AC006611-1|AAK85455.2| 348|Caenorhabditis elegans Vacuolar h
atpase protein 16 protein.
Length = 348
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = -1
Query: 549 FSGTGNGPVSGTWEDGVVDYRQIQKDLNNYVYTF 448
F G+GNGP T ED ++ +++ ++++Y++ F
Sbjct: 275 FEGSGNGPGEKTLEDKFFEH-EVKLNVHSYLHQF 307
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,187,821
Number of Sequences: 27780
Number of extensions: 457857
Number of successful extensions: 1436
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1427
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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