Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12a07
(628 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 270 4e-72
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 270 4e-72
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 270 4e-72
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 270 4e-72
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 270 4e-72
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 270 4e-72
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 270 4e-72
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 270 4e-72
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 270 4e-72
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 239 8e-63
Z69890-1|CAM26669.1| 170|Homo sapiens LUC7-like (S. cerevisiae)... 32 1.4
X79861-1|CAA56240.1| 250|Homo sapiens cardiac troponin T protein. 32 1.9
X79859-1|CAA56239.1| 175|Homo sapiens troponin T protein. 32 1.9
X74819-1|CAA52818.1| 288|Homo sapiens cardiac troponin T protein. 32 1.9
U20979-1|AAA76736.1| 938|Homo sapiens chromatin assembly factor... 32 1.9
L40162-1|AAA67422.1| 288|Homo sapiens troponin T cardiac isofor... 32 1.9
EF179183-1|ABN05286.1| 295|Homo sapiens troponin T type 2 (card... 32 1.9
BC067093-1|AAH67093.1| 956|Homo sapiens chromatin assembly fact... 32 1.9
BC002653-1|AAH02653.1| 285|Homo sapiens troponin T type 2 (card... 32 1.9
AY277394-1|AAP96757.1| 226|Homo sapiens troponin T cardiac isof... 32 1.9
AK125236-1|BAC86093.1| 232|Homo sapiens protein ( Homo sapiens ... 32 1.9
AF190465-2|AAF04291.1| 938|Homo sapiens chromatin assembly fact... 32 1.9
BX640689-1|CAE45814.1| 256|Homo sapiens hypothetical protein pr... 31 3.3
BC023569-1|AAH23569.1| 443|Homo sapiens UPF3 regulator of nonse... 31 3.3
AY013250-1|AAG48510.1| 476|Homo sapiens hUPF3A protein. 31 3.3
AL160396-6|CAM22288.1| 443|Homo sapiens UPF3 regulator of nonse... 31 3.3
AL160396-5|CAI15816.1| 476|Homo sapiens UPF3 regulator of nonse... 31 3.3
AF318575-1|AAG60690.1| 452|Homo sapiens UPF3 protein. 31 3.3
S64668-1|AAB27731.1| 288|Homo sapiens troponin T protein. 31 4.4
CR533548-1|CAG38579.1| 379|Homo sapiens LYAR protein. 31 4.4
BC015796-1|AAH15796.1| 379|Homo sapiens hypothetical protein FL... 31 4.4
AY044273-2|AAK92232.1| 274|Homo sapiens truncated cardiac tropo... 31 4.4
AY044273-1|AAK92231.1| 288|Homo sapiens cardiac troponin T prot... 31 4.4
AK000432-1|BAA91162.1| 379|Homo sapiens protein ( Homo sapiens ... 31 4.4
AF004422-1|AAC39590.1| 288|Homo sapiens troponin T protein. 31 4.4
X79857-1|CAA56237.1| 255|Homo sapiens troponin T protein. 30 5.8
AY211916-1|AAO65169.1| 219|Homo sapiens sarcoma antigen NY-SAR-... 30 5.8
BC063300-1|AAH63300.1| 641|Homo sapiens mannosidase, alpha, cla... 30 7.7
AL358072-1|CAH71079.1| 641|Homo sapiens mannosidase, alpha, cla... 30 7.7
AL157902-1|CAI22315.1| 641|Homo sapiens mannosidase, alpha, cla... 30 7.7
AF053621-1|AAC26200.1| 358|Homo sapiens alpha 1,2-mannosidase I... 30 7.7
AF027156-1|AAC26169.1| 641|Homo sapiens alpha 1,2-mannosidase I... 30 7.7
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 270 bits (661), Expect = 4e-72
Identities = 127/175 (72%), Positives = 145/175 (82%)
Frame = -3
Query: 593 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 414
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 413 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 234
AR RKNT ARRKGRH G GKR+GTANARMP+K W R +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 233 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEARKRREE
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREE 175
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 270 bits (661), Expect = 4e-72
Identities = 127/175 (72%), Positives = 145/175 (82%)
Frame = -3
Query: 593 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 414
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 413 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 234
AR RKNT ARRKGRH G GKR+GTANARMP+K W R +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 233 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEARKRREE
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREE 175
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 270 bits (661), Expect = 4e-72
Identities = 127/175 (72%), Positives = 145/175 (82%)
Frame = -3
Query: 593 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 414
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 10 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 69
Query: 413 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 234
AR RKNT ARRKGRH G GKR+GTANARMP+K W R +KKIDRH+Y
Sbjct: 70 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 129
Query: 233 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEARKRREE
Sbjct: 130 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREE 184
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 270 bits (661), Expect = 4e-72
Identities = 127/175 (72%), Positives = 145/175 (82%)
Frame = -3
Query: 593 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 414
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 413 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 234
AR RKNT ARRKGRH G GKR+GTANARMP+K W R +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 233 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEARKRREE
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREE 175
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 270 bits (661), Expect = 4e-72
Identities = 127/175 (72%), Positives = 145/175 (82%)
Frame = -3
Query: 593 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 414
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 413 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 234
AR RKNT ARRKGRH G GKR+GTANARMP+K W R +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 233 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEARKRREE
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREE 175
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 270 bits (661), Expect = 4e-72
Identities = 127/175 (72%), Positives = 145/175 (82%)
Frame = -3
Query: 593 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 414
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 413 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 234
AR RKNT ARRKGRH G GKR+GTANARMP+K W R +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 233 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEARKRREE
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREE 175
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 270 bits (661), Expect = 4e-72
Identities = 127/175 (72%), Positives = 145/175 (82%)
Frame = -3
Query: 593 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 414
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 413 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 234
AR RKNT ARRKGRH G GKR+GTANARMP+K W R +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 233 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEARKRREE
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREE 175
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 270 bits (661), Expect = 4e-72
Identities = 127/175 (72%), Positives = 145/175 (82%)
Frame = -3
Query: 593 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 414
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 413 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 234
AR RKNT ARRKGRH G GKR+GTANARMP+K W R +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 233 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEARKRREE
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREE 175
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 270 bits (661), Expect = 4e-72
Identities = 127/175 (72%), Positives = 145/175 (82%)
Frame = -3
Query: 593 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 414
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 413 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 234
AR RKNT ARRKGRH G GKR+GTANARMP+K W R +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 233 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEARKRREE
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREE 175
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 239 bits (584), Expect = 8e-63
Identities = 112/156 (71%), Positives = 127/156 (81%)
Frame = -3
Query: 536 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFG 357
KKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G G
Sbjct: 1 KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIG 60
Query: 356 KRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKGNVFKNKRVLM 177
KR+GTANARMP+K W R +KKIDRH+YHSLY+K KGNVFKNKR+LM
Sbjct: 61 KRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILM 120
Query: 176 EYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
E+IH+ KA+KAR K+L+DQAEARR+K KEARKRREE
Sbjct: 121 EHIHKLKADKARKKLLADQAEARRSKTKEARKRREE 156
>Z69890-1|CAM26669.1| 170|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 170
Score = 32.3 bits (70), Expect = 1.4
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = -3
Query: 215 AKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEAR-RNKVKEARKR-REETYCRQEGGT 42
A+GNV +++++LME + +K K ++++ E R +++++ +R REE R+ G
Sbjct: 3 AEGNVDESQKILMEVEKVRAKKKEAEKTVAEKQEKRNQDRLRRREEREREERLSRRSGSR 62
Query: 41 AAD 33
D
Sbjct: 63 TRD 65
>X79861-1|CAA56240.1| 250|Homo sapiens cardiac troponin T protein.
Length = 250
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 182 LMEYIHRKKAEKARTKMLSDQAEA-RRNKVKEARKRREETYCRQE 51
L + I R++AE+A + + ++ E R+N++ E R RREE R++
Sbjct: 118 LKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRK 162
>X79859-1|CAA56239.1| 175|Homo sapiens troponin T protein.
Length = 175
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 182 LMEYIHRKKAEKARTKMLSDQAEA-RRNKVKEARKRREETYCRQE 51
L + I R++AE+A + + ++ E R+N++ E R RREE R++
Sbjct: 119 LKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRK 163
>X74819-1|CAA52818.1| 288|Homo sapiens cardiac troponin T protein.
Length = 288
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 182 LMEYIHRKKAEKARTKMLSDQAEA-RRNKVKEARKRREETYCRQE 51
L + I R++AE+A + + ++ E R+N++ E R RREE R++
Sbjct: 123 LKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRK 167
>U20979-1|AAA76736.1| 938|Homo sapiens chromatin assembly factor-I
p150 subunit protein.
Length = 938
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 197 KNKRVLMEYIHRKKAEKARTK--MLSDQAEARRNKVKEARKRREETYCRQE 51
K +R E ++KAEK R K ++ EA K++E RK+ EE R+E
Sbjct: 366 KERREKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKKEEEKRLREE 416
>L40162-1|AAA67422.1| 288|Homo sapiens troponin T cardiac isoform
protein.
Length = 288
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 182 LMEYIHRKKAEKARTKMLSDQAEA-RRNKVKEARKRREETYCRQE 51
L + I R++AE+A + + ++ E R+N++ E R RREE R++
Sbjct: 123 LKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRK 167
>EF179183-1|ABN05286.1| 295|Homo sapiens troponin T type 2
(cardiac) protein.
Length = 295
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 182 LMEYIHRKKAEKARTKMLSDQAEA-RRNKVKEARKRREETYCRQE 51
L + I R++AE+A + + ++ E R+N++ E R RREE R++
Sbjct: 133 LKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRK 177
>BC067093-1|AAH67093.1| 956|Homo sapiens chromatin assembly factor
1, subunit A (p150) protein.
Length = 956
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 197 KNKRVLMEYIHRKKAEKARTK--MLSDQAEARRNKVKEARKRREETYCRQE 51
K +R E ++KAEK R K ++ EA K++E RK+ EE R+E
Sbjct: 384 KERREKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKKEEEKRLREE 434
>BC002653-1|AAH02653.1| 285|Homo sapiens troponin T type 2
(cardiac) protein.
Length = 285
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 182 LMEYIHRKKAEKARTKMLSDQAEA-RRNKVKEARKRREETYCRQE 51
L + I R++AE+A + + ++ E R+N++ E R RREE R++
Sbjct: 123 LKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRK 167
>AY277394-1|AAP96757.1| 226|Homo sapiens troponin T cardiac isoform
protein.
Length = 226
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 182 LMEYIHRKKAEKARTKMLSDQAEA-RRNKVKEARKRREETYCRQE 51
L + I R++AE+A + + ++ E R+N++ E R RREE R++
Sbjct: 64 LKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRK 108
>AK125236-1|BAC86093.1| 232|Homo sapiens protein ( Homo sapiens
cDNA FLJ43246 fis, clone HEART1000139, highly similar
to TROPONIN T, CARDIAC MUSCLE ISOFORMS. ).
Length = 232
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 182 LMEYIHRKKAEKARTKMLSDQAEA-RRNKVKEARKRREETYCRQE 51
L + I R++AE+A + + ++ E R+N++ E R RREE R++
Sbjct: 67 LKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRK 111
>AF190465-2|AAF04291.1| 938|Homo sapiens chromatin assembly
factor-I p150 subunit protein.
Length = 938
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 197 KNKRVLMEYIHRKKAEKARTK--MLSDQAEARRNKVKEARKRREETYCRQE 51
K +R E ++KAEK R K ++ EA K++E RK+ EE R+E
Sbjct: 366 KERREKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKKEEEKRLREE 416
>BX640689-1|CAE45814.1| 256|Homo sapiens hypothetical protein
protein.
Length = 256
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 182 LMEYIHRKKAEKARTKMLSDQAEA-RRNKVKEARKRREETYCRQEGG 45
L E I +++AE+A + + + E R+N++ E + RREE ++ G
Sbjct: 90 LKERIEKRRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRRAG 136
>BC023569-1|AAH23569.1| 443|Homo sapiens UPF3 regulator of nonsense
transcripts homolog A (yeast) protein.
Length = 443
Score = 31.1 bits (67), Expect = 3.3
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = -3
Query: 197 KNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREETYCRQE 51
KN+++ + I +K E+ R + L E +R + +E R+RREE C+++
Sbjct: 189 KNRKLEKQRIREEKREERRRREL----EKKRLREEEKRRRREEERCKKK 233
>AY013250-1|AAG48510.1| 476|Homo sapiens hUPF3A protein.
Length = 476
Score = 31.1 bits (67), Expect = 3.3
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = -3
Query: 197 KNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREETYCRQE 51
KN+++ + I +K E+ R + L E +R + +E R+RREE C+++
Sbjct: 222 KNRKLEKQRIREEKREERRRREL----EKKRLREEEKRRRREEERCKKK 266
>AL160396-6|CAM22288.1| 443|Homo sapiens UPF3 regulator of nonsense
transcripts homolog A (yeast) protein.
Length = 443
Score = 31.1 bits (67), Expect = 3.3
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = -3
Query: 197 KNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREETYCRQE 51
KN+++ + I +K E+ R + L E +R + +E R+RREE C+++
Sbjct: 189 KNRKLEKQRIREEKREERRRREL----EKKRLREEEKRRRREEERCKKK 233
>AL160396-5|CAI15816.1| 476|Homo sapiens UPF3 regulator of nonsense
transcripts homolog A (yeast) protein.
Length = 476
Score = 31.1 bits (67), Expect = 3.3
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = -3
Query: 197 KNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREETYCRQE 51
KN+++ + I +K E+ R + L E +R + +E R+RREE C+++
Sbjct: 222 KNRKLEKQRIREEKREERRRREL----EKKRLREEEKRRRREEERCKKK 266
>AF318575-1|AAG60690.1| 452|Homo sapiens UPF3 protein.
Length = 452
Score = 31.1 bits (67), Expect = 3.3
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = -3
Query: 197 KNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREETYCRQE 51
KN+++ + I +K E+ R + L E +R + +E R+RREE C+++
Sbjct: 198 KNRKLEKQRIREEKREERRRREL----EKKRLREEEKRRRREEERCKKK 242
>S64668-1|AAB27731.1| 288|Homo sapiens troponin T protein.
Length = 288
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 182 LMEYIHRKKAEKARTKMLSDQAEA-RRNKVKEARKRREETYCRQE 51
L + I +++AE+A + + ++ E R+N++ E R RREE R++
Sbjct: 123 LKDRIEKRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRK 167
>CR533548-1|CAG38579.1| 379|Homo sapiens LYAR protein.
Length = 379
Score = 30.7 bits (66), Expect = 4.4
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 221 MKAKGNVFKNKRVLMEYIHRK-KAEKARTKMLSDQAEARRNKVKEARKRRE 72
++ +G V KNKR E +K K EK K+ + Q +R K K+ +K +E
Sbjct: 178 VEQQGEVKKNKRERKEERQKKRKREKKELKLENHQENSRNQKPKKRKKGQE 228
>BC015796-1|AAH15796.1| 379|Homo sapiens hypothetical protein
FLJ20425 protein.
Length = 379
Score = 30.7 bits (66), Expect = 4.4
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 221 MKAKGNVFKNKRVLMEYIHRK-KAEKARTKMLSDQAEARRNKVKEARKRRE 72
++ +G V KNKR E +K K EK K+ + Q +R K K+ +K +E
Sbjct: 178 VEQQGEVKKNKRERKEERQKKRKREKKELKLENHQENSRNQKPKKRKKGQE 228
>AY044273-2|AAK92232.1| 274|Homo sapiens truncated cardiac troponin
T protein.
Length = 274
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 182 LMEYIHRKKAEKARTKMLSDQAEA-RRNKVKEARKRREETYCRQE 51
L + I +++AE+A + + ++ E R+N++ E R RREE R++
Sbjct: 123 LKDRIEKRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRK 167
>AY044273-1|AAK92231.1| 288|Homo sapiens cardiac troponin T
protein.
Length = 288
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 182 LMEYIHRKKAEKARTKMLSDQAEA-RRNKVKEARKRREETYCRQE 51
L + I +++AE+A + + ++ E R+N++ E R RREE R++
Sbjct: 123 LKDRIEKRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRK 167
>AK000432-1|BAA91162.1| 379|Homo sapiens protein ( Homo sapiens
cDNA FLJ20425 fis, clone KAT02707. ).
Length = 379
Score = 30.7 bits (66), Expect = 4.4
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 221 MKAKGNVFKNKRVLMEYIHRK-KAEKARTKMLSDQAEARRNKVKEARKRRE 72
++ +G V KNKR E +K K EK K+ + Q +R K K+ +K +E
Sbjct: 178 VEQQGEVKKNKRERKEERQKKRKREKKELKLENHQENSRNQKPKKRKKGQE 228
>AF004422-1|AAC39590.1| 288|Homo sapiens troponin T protein.
Length = 288
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 182 LMEYIHRKKAEKARTKMLSDQAEA-RRNKVKEARKRREETYCRQE 51
L + I +++AE+A + + ++ E R+N++ E R RREE R++
Sbjct: 123 LKDRIEKRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRK 167
>X79857-1|CAA56237.1| 255|Homo sapiens troponin T protein.
Length = 255
Score = 30.3 bits (65), Expect = 5.8
Identities = 14/44 (31%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = -3
Query: 179 MEYIHRKKAEKARTKMLSDQAEA-RRNKVKEARKRREETYCRQE 51
+++ R++AE+A + + ++ E R+N++ E R RREE R++
Sbjct: 94 VDFDERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRK 137
>AY211916-1|AAO65169.1| 219|Homo sapiens sarcoma antigen NY-SAR-29
protein.
Length = 219
Score = 30.3 bits (65), Expect = 5.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3
Query: 164 RKKAEKARTKMLSDQAEARRNKVKEARKRREETYCRQEG 48
+KK + + K L D E RR + +E +++RE +C EG
Sbjct: 113 KKKKKSEKEKHLDD--EERRKRKEEKKRKREREHCDTEG 149
>BC063300-1|AAH63300.1| 641|Homo sapiens mannosidase, alpha, class
1A, member 2 protein.
Length = 641
Score = 29.9 bits (64), Expect = 7.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 176 EYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
E+ HR++ E+ R K+ +D +A ++ RK REE
Sbjct: 97 EHRHREEEERLRNKIRADHEKALEEAKEKLRKSREE 132
>AL358072-1|CAH71079.1| 641|Homo sapiens mannosidase, alpha, class
1A, member 2 protein.
Length = 641
Score = 29.9 bits (64), Expect = 7.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 176 EYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
E+ HR++ E+ R K+ +D +A ++ RK REE
Sbjct: 97 EHRHREEEERLRNKIRADHEKALEEAKEKLRKSREE 132
>AL157902-1|CAI22315.1| 641|Homo sapiens mannosidase, alpha, class
1A, member 2 protein.
Length = 641
Score = 29.9 bits (64), Expect = 7.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 176 EYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
E+ HR++ E+ R K+ +D +A ++ RK REE
Sbjct: 97 EHRHREEEERLRNKIRADHEKALEEAKEKLRKSREE 132
>AF053621-1|AAC26200.1| 358|Homo sapiens alpha 1,2-mannosidase IB
protein.
Length = 358
Score = 29.9 bits (64), Expect = 7.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 176 EYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
E+ HR++ E+ R K+ +D +A ++ RK REE
Sbjct: 97 EHRHREEEERLRNKIRADHEKALEEAKEKLRKSREE 132
>AF027156-1|AAC26169.1| 641|Homo sapiens alpha 1,2-mannosidase IB
protein.
Length = 641
Score = 29.9 bits (64), Expect = 7.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 176 EYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
E+ HR++ E+ R K+ +D +A ++ RK REE
Sbjct: 97 EHRHREEEERLRNKIRADHEKALEEAKEKLRKSREE 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,566,508
Number of Sequences: 237096
Number of extensions: 2246776
Number of successful extensions: 5444
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 5118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5426
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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