Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc12a07
(628 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p pro... 298 3e-81
AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p pro... 298 3e-81
AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB... 298 3e-81
AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA... 298 3e-81
X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal prot... 295 2e-80
AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-P... 32 0.73
AY060882-1|AAL28430.1| 222|Drosophila melanogaster GM04269p pro... 30 2.2
AE014134-3064|AAF53778.2| 868|Drosophila melanogaster CG31797-P... 30 2.2
AY061596-1|AAL29144.1| 751|Drosophila melanogaster SD04745p pro... 29 3.9
AE014134-2932|AAF53667.3| 1330|Drosophila melanogaster CG12750-P... 29 3.9
AF145671-1|AAD38646.1| 800|Drosophila melanogaster BcDNA.GH1197... 29 5.1
AE014296-3529|AAF51717.1| 800|Drosophila melanogaster CG6014-PA... 29 5.1
L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy... 29 6.8
BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p pro... 29 6.8
BT015257-1|AAT94486.1| 988|Drosophila melanogaster LP04173p pro... 29 6.8
AY058479-1|AAL13708.1| 700|Drosophila melanogaster GH28722p pro... 29 6.8
AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,... 29 6.8
AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,... 29 6.8
AE014296-443|AAF47637.2| 988|Drosophila melanogaster CG1317-PB ... 29 6.8
AE014134-504|AAF51184.1| 222|Drosophila melanogaster CG3083-PA ... 29 6.8
BT021377-1|AAX33525.1| 540|Drosophila melanogaster LD43587p pro... 28 9.0
AF145613-1|AAD38588.1| 516|Drosophila melanogaster BcDNA.GH0310... 28 9.0
AE014297-3432|AAF56219.2| 267|Drosophila melanogaster CG33108-P... 28 9.0
AE013599-3995|AAF47301.1| 540|Drosophila melanogaster CG2790-PA... 28 9.0
>BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p
protein.
Length = 208
Score = 298 bits (732), Expect = 3e-81
Identities = 143/175 (81%), Positives = 152/175 (86%)
Frame = -3
Query: 593 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 414
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 6 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 65
Query: 413 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 234
RVRKNTEARRKGRHCGFGKR+GTANARMP K LW R +KKIDRHLY
Sbjct: 66 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 125
Query: 233 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQAEARR KV+EARKRREE
Sbjct: 126 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREE 180
>AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p
protein.
Length = 221
Score = 298 bits (732), Expect = 3e-81
Identities = 143/175 (81%), Positives = 152/175 (86%)
Frame = -3
Query: 593 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 414
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 19 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 78
Query: 413 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 234
RVRKNTEARRKGRHCGFGKR+GTANARMP K LW R +KKIDRHLY
Sbjct: 79 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 138
Query: 233 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQAEARR KV+EARKRREE
Sbjct: 139 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREE 193
>AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB,
isoform B protein.
Length = 203
Score = 298 bits (732), Expect = 3e-81
Identities = 143/175 (81%), Positives = 152/175 (86%)
Frame = -3
Query: 593 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 414
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 413 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 234
RVRKNTEARRKGRHCGFGKR+GTANARMP K LW R +KKIDRHLY
Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120
Query: 233 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQAEARR KV+EARKRREE
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREE 175
>AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA,
isoform A protein.
Length = 203
Score = 298 bits (732), Expect = 3e-81
Identities = 143/175 (81%), Positives = 152/175 (86%)
Frame = -3
Query: 593 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 414
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 413 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 234
RVRKNTEARRKGRHCGFGKR+GTANARMP K LW R +KKIDRHLY
Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120
Query: 233 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQAEARR KV+EARKRREE
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREE 175
>X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal protein
L19 protein.
Length = 203
Score = 295 bits (725), Expect = 2e-80
Identities = 142/175 (81%), Positives = 151/175 (86%)
Frame = -3
Query: 593 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 414
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 413 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 234
RVRKNTEARRK RHCGFGKR+GTANARMP K LW R +KKIDRHLY
Sbjct: 61 YRVRKNTEARRKDRHCGFGKRKGTANARMPTKLLWMQRQPFCRRLLKKYRDSKKIDRHLY 120
Query: 233 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQAEARR KV+EARKRREE
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREE 175
>AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-PA
protein.
Length = 1718
Score = 31.9 bits (69), Expect = 0.73
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +1
Query: 172 YSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSFCGIRALAV 345
YS++ +L L +YR FL +++ NF TLC C +S FCG A V
Sbjct: 1321 YSIAQFRYLERLLLVHGRWSYYRMCK-FLRYFFYK-NFAFTLCHCWYSLFCGFSAQTV 1376
>AY060882-1|AAL28430.1| 222|Drosophila melanogaster GM04269p
protein.
Length = 222
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -1
Query: 622 LCALDLT-VSG*VPSSCRRGLQP--LLCDVVKRRCGWIQ 515
+C +L+ V+ +P +RG++P L CD VK GWI+
Sbjct: 47 VCTTELSRVAALIPEFQKRGVKPIALSCDTVKSHKGWIE 85
>AE014134-3064|AAF53778.2| 868|Drosophila melanogaster CG31797-PA
protein.
Length = 868
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -3
Query: 200 FKNKRVLMEYIHRKKAEKARTKM--LSDQAEARRNKVKEARKRREET 66
+KNK + +KK EKA+ K + E +R KVK+ +++ +ET
Sbjct: 425 YKNKEDKEKEREKKKREKAKEKKKGKDKETEKKREKVKKKKEKNKET 471
>AY061596-1|AAL29144.1| 751|Drosophila melanogaster SD04745p
protein.
Length = 751
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -3
Query: 218 KAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
K K KNK+ +KKAEK + K Q ++++ K K+ ++++EE
Sbjct: 407 KEKSKKTKNKK------KKKKAEKEQEKEKEKQRKSKKEKEKDKKRKKEE 450
>AE014134-2932|AAF53667.3| 1330|Drosophila melanogaster CG12750-PA
protein.
Length = 1330
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -3
Query: 218 KAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
K K KNK+ +KKAEK + K Q ++++ K K+ ++++EE
Sbjct: 998 KEKSKKTKNKK------KKKKAEKEQEKEKEKQRKSKKEKEKDKKRKKEE 1041
>AF145671-1|AAD38646.1| 800|Drosophila melanogaster BcDNA.GH11973
protein.
Length = 800
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -3
Query: 221 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREETYCRQE 51
+K + + K + E I R++ E+ + L EARR + KE ++ EE R+E
Sbjct: 597 LKLQEQLKKQEDERQEQIRREQEEEEKRLELERLEEARRFEEKELKRLHEENQRREE 653
>AE014296-3529|AAF51717.1| 800|Drosophila melanogaster CG6014-PA
protein.
Length = 800
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -3
Query: 221 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREETYCRQE 51
+K + + K + E I R++ E+ + L EARR + KE ++ EE R+E
Sbjct: 597 LKLQEQLKKQEDERQEQIRREQEEEEKRLELERLEEARRFEEKELKRLHEENQRREE 653
>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic
dynein heavy chian protein.
Length = 4639
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 506 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 405
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p
protein.
Length = 1312
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 506 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 405
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>BT015257-1|AAT94486.1| 988|Drosophila melanogaster LP04173p protein.
Length = 988
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -3
Query: 227 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
LY+ K + + + L+ Y HRKK ++ + + Q AR + + R R E
Sbjct: 922 LYLSIKVDKYLVGQRLVNYEHRKKQQQQQEEEKEQQRAARELRENQERDRERE 974
>AY058479-1|AAL13708.1| 700|Drosophila melanogaster GH28722p
protein.
Length = 700
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -3
Query: 227 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
LY+ K + + + L+ Y HRKK ++ + + Q AR + + R R E
Sbjct: 634 LYLSIKVDKYLVGQRLVNYEHRKKQQQQQEEEKEQQRAARELRENQERDRERE 686
>AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,
isoform B protein.
Length = 3388
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 506 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 405
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,
isoform A protein.
Length = 4639
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 506 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 405
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>AE014296-443|AAF47637.2| 988|Drosophila melanogaster CG1317-PB
protein.
Length = 988
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -3
Query: 227 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREE 69
LY+ K + + + L+ Y HRKK ++ + + Q AR + + R R E
Sbjct: 922 LYLSIKVDKYLVGQRLVNYEHRKKQQQQQEEEKEQQRAARELRENQERDRERE 974
>AE014134-504|AAF51184.1| 222|Drosophila melanogaster CG3083-PA
protein.
Length = 222
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -1
Query: 622 LCALDLT-VSG*VPSSCRRGLQP--LLCDVVKRRCGWIQ 515
+C +L+ V+ +P +RG++P L CD V+ GWI+
Sbjct: 47 VCTTELSRVAALIPEFQKRGVKPIALSCDTVESHKGWIE 85
>BT021377-1|AAX33525.1| 540|Drosophila melanogaster LD43587p
protein.
Length = 540
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = -3
Query: 257 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAE-KARTKMLSDQAEARRNKVKEARK 81
+K+++ + + A+ + R L+ ++ ++ +A +ML ++ EA N++K+ K
Sbjct: 182 RKVEKEM-KKIVQAARKERNEEVRNLVNFVRKRDPRVQAYRRMLEERVEA--NRLKQEEK 238
Query: 80 RREETYCRQE 51
R+E+ RQE
Sbjct: 239 RKEQLRKRQE 248
>AF145613-1|AAD38588.1| 516|Drosophila melanogaster BcDNA.GH03108
protein.
Length = 516
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = -3
Query: 257 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAE-KARTKMLSDQAEARRNKVKEARK 81
+K+++ + + A+ + R L+ ++ ++ +A +ML ++ EA N++K+ K
Sbjct: 157 RKVEKEM-KKIVQAARKERNEEVRNLVNFVRKRDPRVQAYRRMLEERVEA--NRLKQEEK 213
Query: 80 RREETYCRQE 51
R+E+ RQE
Sbjct: 214 RKEQLRKRQE 223
>AE014297-3432|AAF56219.2| 267|Drosophila melanogaster CG33108-PA
protein.
Length = 267
Score = 28.3 bits (60), Expect = 9.0
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Frame = +2
Query: 203 HYPSPS-CRVS-GIDACQSSWQFCTSGAIFLEPFV----FVPIVPSVAYAHWQYLFSYQS 364
H P P+ C++ G C+ + +G L P+ P V + AHW + Y
Sbjct: 128 HMPGPAACQLHVGPLDCKKVKELLKAGGCLLVPYDADVNHAPCVKNGHRAHWALIVGYLV 187
Query: 365 HSDDPFYVPLCFCGHGRGSGL 427
+ D FYV HG+ L
Sbjct: 188 DTQDRFYV---LARHGKSRNL 205
>AE013599-3995|AAF47301.1| 540|Drosophila melanogaster CG2790-PA
protein.
Length = 540
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = -3
Query: 257 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAE-KARTKMLSDQAEARRNKVKEARK 81
+K+++ + + A+ + R L+ ++ ++ +A +ML ++ EA N++K+ K
Sbjct: 182 RKVEKEM-KKIVQAARKERNEEVRNLVNFVRKRDPRVQAYRRMLEERVEA--NRLKQEEK 238
Query: 80 RREETYCRQE 51
R+E+ RQE
Sbjct: 239 RKEQLRKRQE 248
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,526,323
Number of Sequences: 53049
Number of extensions: 654512
Number of successful extensions: 2166
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2151
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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