Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11p10
(849 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060664-1|AAL28212.1| 364|Drosophila melanogaster GH08894p pro... 273 2e-73
AE014297-4750|AAF57155.1| 364|Drosophila melanogaster CG11334-P... 273 2e-73
AE014297-4749|AAF57154.1| 364|Drosophila melanogaster CG11334-P... 273 2e-73
AY060991-1|AAL28539.1| 306|Drosophila melanogaster HL01112p pro... 51 2e-06
AJ344146-1|CAC82991.1| 306|Drosophila melanogaster eIF2B-alpha ... 51 2e-06
AF289100-1|AAG38014.1| 300|Drosophila melanogaster eukaryotic i... 51 2e-06
AE014297-4491|AAF56977.1| 306|Drosophila melanogaster CG7883-PA... 51 2e-06
BT023929-1|ABB36433.1| 352|Drosophila melanogaster RE60807p pro... 49 9e-06
AL023874-4|CAA19648.1| 352|Drosophila melanogaster EG:100G10.3 ... 49 9e-06
AJ344147-1|CAC82992.1| 352|Drosophila melanogaster eIF2B-beta p... 49 9e-06
AF289101-1|AAG38015.1| 352|Drosophila melanogaster eukaryotic i... 49 9e-06
AE014298-446|AAF45809.1| 352|Drosophila melanogaster CG2677-PA ... 49 9e-06
AY069341-1|AAL39486.1| 626|Drosophila melanogaster LD05345p pro... 40 0.004
AJ344149-1|CAC82994.1| 576|Drosophila melanogaster eIF2B-delta ... 40 0.004
AE013599-3596|AAM68250.1| 576|Drosophila melanogaster CG10315-P... 40 0.004
AE013599-3595|AAM68249.1| 576|Drosophila melanogaster CG10315-P... 40 0.004
AE013599-3594|AAF46995.1| 626|Drosophila melanogaster CG10315-P... 40 0.004
BT023760-1|AAZ41768.1| 576|Drosophila melanogaster RE55357p pro... 39 0.008
>AY060664-1|AAL28212.1| 364|Drosophila melanogaster GH08894p
protein.
Length = 364
Score = 273 bits (670), Expect = 2e-73
Identities = 124/156 (79%), Positives = 143/156 (91%)
Frame = -3
Query: 826 VRVLTHCNTGSLATAGYGTALGVIRSLHATKRLEHVFCTETRPYNQGARLTAYELVHEKI 647
VRVLTHCNTGSLATAGYGTALGV+R L +LEHV+CTETRPYNQGARLTAYELVHEK
Sbjct: 168 VRVLTHCNTGSLATAGYGTALGVVRQLAELGKLEHVYCTETRPYNQGARLTAYELVHEKF 227
Query: 646 PSTLIVDSMVSALMHTRKIHAVIVGADRVAANGDTANKIGTYQIAIVAKYHDVPFYVAAP 467
P+TL++DSMV+AL+ + + AV+VGADRVA+NGDTANKIGTYQIA+VAK+HDVPFYVAAP
Sbjct: 228 PATLVLDSMVAALLRAKNVAAVVVGADRVASNGDTANKIGTYQIAVVAKHHDVPFYVAAP 287
Query: 466 LTSIDMSLPYGEKIKIEERPDREMTHIGEHRIAAPG 359
LTSID+++P G+ I IEERPDREMTH+GEHRIAAPG
Sbjct: 288 LTSIDLAIPGGDHIIIEERPDREMTHVGEHRIAAPG 323
>AE014297-4750|AAF57155.1| 364|Drosophila melanogaster CG11334-PB,
isoform B protein.
Length = 364
Score = 273 bits (670), Expect = 2e-73
Identities = 124/156 (79%), Positives = 143/156 (91%)
Frame = -3
Query: 826 VRVLTHCNTGSLATAGYGTALGVIRSLHATKRLEHVFCTETRPYNQGARLTAYELVHEKI 647
VRVLTHCNTGSLATAGYGTALGV+R L +LEHV+CTETRPYNQGARLTAYELVHEK
Sbjct: 168 VRVLTHCNTGSLATAGYGTALGVVRQLAELGKLEHVYCTETRPYNQGARLTAYELVHEKF 227
Query: 646 PSTLIVDSMVSALMHTRKIHAVIVGADRVAANGDTANKIGTYQIAIVAKYHDVPFYVAAP 467
P+TL++DSMV+AL+ + + AV+VGADRVA+NGDTANKIGTYQIA+VAK+HDVPFYVAAP
Sbjct: 228 PATLVLDSMVAALLRAKNVAAVVVGADRVASNGDTANKIGTYQIAVVAKHHDVPFYVAAP 287
Query: 466 LTSIDMSLPYGEKIKIEERPDREMTHIGEHRIAAPG 359
LTSID+++P G+ I IEERPDREMTH+GEHRIAAPG
Sbjct: 288 LTSIDLAIPGGDHIIIEERPDREMTHVGEHRIAAPG 323
>AE014297-4749|AAF57154.1| 364|Drosophila melanogaster CG11334-PA,
isoform A protein.
Length = 364
Score = 273 bits (670), Expect = 2e-73
Identities = 124/156 (79%), Positives = 143/156 (91%)
Frame = -3
Query: 826 VRVLTHCNTGSLATAGYGTALGVIRSLHATKRLEHVFCTETRPYNQGARLTAYELVHEKI 647
VRVLTHCNTGSLATAGYGTALGV+R L +LEHV+CTETRPYNQGARLTAYELVHEK
Sbjct: 168 VRVLTHCNTGSLATAGYGTALGVVRQLAELGKLEHVYCTETRPYNQGARLTAYELVHEKF 227
Query: 646 PSTLIVDSMVSALMHTRKIHAVIVGADRVAANGDTANKIGTYQIAIVAKYHDVPFYVAAP 467
P+TL++DSMV+AL+ + + AV+VGADRVA+NGDTANKIGTYQIA+VAK+HDVPFYVAAP
Sbjct: 228 PATLVLDSMVAALLRAKNVAAVVVGADRVASNGDTANKIGTYQIAVVAKHHDVPFYVAAP 287
Query: 466 LTSIDMSLPYGEKIKIEERPDREMTHIGEHRIAAPG 359
LTSID+++P G+ I IEERPDREMTH+GEHRIAAPG
Sbjct: 288 LTSIDLAIPGGDHIIIEERPDREMTHVGEHRIAAPG 323
>AY060991-1|AAL28539.1| 306|Drosophila melanogaster HL01112p
protein.
Length = 306
Score = 51.2 bits (117), Expect = 2e-06
Identities = 32/103 (31%), Positives = 50/103 (48%)
Frame = -3
Query: 736 KRLEHVFCTETRPYNQGARLTAYELVHEKIPSTLIVDSMVSALMHTRKIHAVIVGADRVA 557
K+ HV+ T+ N G + +L I TLI+DS +M + + V+VGA+ V
Sbjct: 152 KKSFHVYVTQGGTGNSGEEMVK-DLHAAGIDCTLILDSATGYVMES--VDFVLVGAEAVV 208
Query: 556 ANGDTANKIGTYQIAIVAKYHDVPFYVAAPLTSIDMSLPYGEK 428
+G N+IGTY + + A+ PFYV A P ++
Sbjct: 209 ESGGIINRIGTYTMGLCAREMKKPFYVLAESFKFSRLYPLNQR 251
>AJ344146-1|CAC82991.1| 306|Drosophila melanogaster eIF2B-alpha
protein protein.
Length = 306
Score = 51.2 bits (117), Expect = 2e-06
Identities = 32/103 (31%), Positives = 50/103 (48%)
Frame = -3
Query: 736 KRLEHVFCTETRPYNQGARLTAYELVHEKIPSTLIVDSMVSALMHTRKIHAVIVGADRVA 557
K+ HV+ T+ N G + +L I TLI+DS +M + + V+VGA+ V
Sbjct: 152 KKSFHVYVTQGGTGNSGEEMVK-DLHAAGIDCTLILDSATGYVMES--VDFVLVGAEAVV 208
Query: 556 ANGDTANKIGTYQIAIVAKYHDVPFYVAAPLTSIDMSLPYGEK 428
+G N+IGTY + + A+ PFYV A P ++
Sbjct: 209 ESGGIINRIGTYTMGLCAREMKKPFYVLAESFKFSRLYPLNQR 251
>AF289100-1|AAG38014.1| 300|Drosophila melanogaster eukaryotic
initiation factor eIF2Balpha subunit protein.
Length = 300
Score = 51.2 bits (117), Expect = 2e-06
Identities = 32/103 (31%), Positives = 50/103 (48%)
Frame = -3
Query: 736 KRLEHVFCTETRPYNQGARLTAYELVHEKIPSTLIVDSMVSALMHTRKIHAVIVGADRVA 557
K+ HV+ T+ N G + +L I TLI+DS +M + + V+VGA+ V
Sbjct: 146 KKSFHVYVTQGGTGNSGEEMVK-DLHAAGIDCTLILDSATGYVMES--VDFVLVGAEAVV 202
Query: 556 ANGDTANKIGTYQIAIVAKYHDVPFYVAAPLTSIDMSLPYGEK 428
+G N+IGTY + + A+ PFYV A P ++
Sbjct: 203 ESGGIINRIGTYTMGLCAREMKKPFYVLAESFKFSRLYPLNQR 245
>AE014297-4491|AAF56977.1| 306|Drosophila melanogaster CG7883-PA
protein.
Length = 306
Score = 51.2 bits (117), Expect = 2e-06
Identities = 32/103 (31%), Positives = 50/103 (48%)
Frame = -3
Query: 736 KRLEHVFCTETRPYNQGARLTAYELVHEKIPSTLIVDSMVSALMHTRKIHAVIVGADRVA 557
K+ HV+ T+ N G + +L I TLI+DS +M + + V+VGA+ V
Sbjct: 152 KKSFHVYVTQGGTGNSGEEMVK-DLHAAGIDCTLILDSATGYVMES--VDFVLVGAEAVV 208
Query: 556 ANGDTANKIGTYQIAIVAKYHDVPFYVAAPLTSIDMSLPYGEK 428
+G N+IGTY + + A+ PFYV A P ++
Sbjct: 209 ESGGIINRIGTYTMGLCAREMKKPFYVLAESFKFSRLYPLNQR 251
>BT023929-1|ABB36433.1| 352|Drosophila melanogaster RE60807p
protein.
Length = 352
Score = 48.8 bits (111), Expect = 9e-06
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = -3
Query: 721 VFCTETRPYNQGARLTAYELVHEK-IPSTLIVDSMVSALMHTRKIHAVIVGADRVAANGD 545
+ E P +G L A L +EK + +I D+ + A+M +++ VI+G V ANG
Sbjct: 190 IIVAECAPACRGHNLAA-SLANEKNVEIVVIPDAAIFAMMS--RVNKVIIGTHSVLANGG 246
Query: 544 TANKIGTYQIAIVAKYHDVPFYVAAPL 464
G Y +A+ AK++ VP V AP+
Sbjct: 247 LRAACGAYTVALAAKHYSVPVIVLAPM 273
>AL023874-4|CAA19648.1| 352|Drosophila melanogaster EG:100G10.3
protein.
Length = 352
Score = 48.8 bits (111), Expect = 9e-06
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = -3
Query: 721 VFCTETRPYNQGARLTAYELVHEK-IPSTLIVDSMVSALMHTRKIHAVIVGADRVAANGD 545
+ E P +G L A L +EK + +I D+ + A+M +++ VI+G V ANG
Sbjct: 190 IIVAECAPACRGHNLAA-SLANEKNVEIVVIPDAAIFAMMS--RVNKVIIGTHSVLANGG 246
Query: 544 TANKIGTYQIAIVAKYHDVPFYVAAPL 464
G Y +A+ AK++ VP V AP+
Sbjct: 247 LRAACGAYTVALAAKHYSVPVIVLAPM 273
>AJ344147-1|CAC82992.1| 352|Drosophila melanogaster eIF2B-beta
protein protein.
Length = 352
Score = 48.8 bits (111), Expect = 9e-06
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = -3
Query: 721 VFCTETRPYNQGARLTAYELVHEK-IPSTLIVDSMVSALMHTRKIHAVIVGADRVAANGD 545
+ E P +G L A L +EK + +I D+ + A+M +++ VI+G V ANG
Sbjct: 190 IIVAECAPACRGHNLAA-SLANEKNVEIVVIPDAAIFAMMS--RVNKVIIGTHSVLANGG 246
Query: 544 TANKIGTYQIAIVAKYHDVPFYVAAPL 464
G Y +A+ AK++ VP V AP+
Sbjct: 247 LRAACGAYTVALAAKHYSVPVIVLAPM 273
>AF289101-1|AAG38015.1| 352|Drosophila melanogaster eukaryotic
initiation factor eIF2Bbeta subunit protein.
Length = 352
Score = 48.8 bits (111), Expect = 9e-06
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = -3
Query: 721 VFCTETRPYNQGARLTAYELVHEK-IPSTLIVDSMVSALMHTRKIHAVIVGADRVAANGD 545
+ E P +G L A L +EK + +I D+ + A+M +++ VI+G V ANG
Sbjct: 190 IIVAECAPACRGHNLAA-SLANEKNVEIVVIPDAAIFAMMS--RVNKVIIGTHSVLANGG 246
Query: 544 TANKIGTYQIAIVAKYHDVPFYVAAPL 464
G Y +A+ AK++ VP V AP+
Sbjct: 247 LRAACGAYTVALAAKHYSVPVIVLAPM 273
>AE014298-446|AAF45809.1| 352|Drosophila melanogaster CG2677-PA
protein.
Length = 352
Score = 48.8 bits (111), Expect = 9e-06
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = -3
Query: 721 VFCTETRPYNQGARLTAYELVHEK-IPSTLIVDSMVSALMHTRKIHAVIVGADRVAANGD 545
+ E P +G L A L +EK + +I D+ + A+M +++ VI+G V ANG
Sbjct: 190 IIVAECAPACRGHNLAA-SLANEKNVEIVVIPDAAIFAMMS--RVNKVIIGTHSVLANGG 246
Query: 544 TANKIGTYQIAIVAKYHDVPFYVAAPL 464
G Y +A+ AK++ VP V AP+
Sbjct: 247 LRAACGAYTVALAAKHYSVPVIVLAPM 273
>AY069341-1|AAL39486.1| 626|Drosophila melanogaster LD05345p
protein.
Length = 626
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = -3
Query: 721 VFCTETRPYNQGARLTAYELVHEKIPSTLIVDSMVSALMHTRKIHAVIVGADRVAANGDT 542
V ++RP +G L L IP T ++ + V +M + V++GA + ANG
Sbjct: 462 VIVVDSRPGCEGQELLR-RLHATGIPCTYVLINAVGYVM--AEATKVLLGAHALLANGYV 518
Query: 541 ANKIGTYQIAIVAKYHDVPFYV 476
+ GT Q+A+VA H+VP V
Sbjct: 519 MARTGTAQVALVANAHNVPVLV 540
>AJ344149-1|CAC82994.1| 576|Drosophila melanogaster eIF2B-delta
protein protein.
Length = 576
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = -3
Query: 721 VFCTETRPYNQGARLTAYELVHEKIPSTLIVDSMVSALMHTRKIHAVIVGADRVAANGDT 542
V ++RP +G L L IP T ++ + V +M + V++GA + ANG
Sbjct: 412 VIVVDSRPGCEGQELLR-RLHATGIPCTYVLINAVGYVM--AEATKVLLGAHALLANGYV 468
Query: 541 ANKIGTYQIAIVAKYHDVPFYV 476
+ GT Q+A+VA H+VP V
Sbjct: 469 MARTGTAQVALVANAHNVPVLV 490
>AE013599-3596|AAM68250.1| 576|Drosophila melanogaster CG10315-PC,
isoform C protein.
Length = 576
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = -3
Query: 721 VFCTETRPYNQGARLTAYELVHEKIPSTLIVDSMVSALMHTRKIHAVIVGADRVAANGDT 542
V ++RP +G L L IP T ++ + V +M + V++GA + ANG
Sbjct: 412 VIVVDSRPGCEGQELLR-RLHATGIPCTYVLINAVGYVM--AEATKVLLGAHALLANGYV 468
Query: 541 ANKIGTYQIAIVAKYHDVPFYV 476
+ GT Q+A+VA H+VP V
Sbjct: 469 MARTGTAQVALVANAHNVPVLV 490
>AE013599-3595|AAM68249.1| 576|Drosophila melanogaster CG10315-PB,
isoform B protein.
Length = 576
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = -3
Query: 721 VFCTETRPYNQGARLTAYELVHEKIPSTLIVDSMVSALMHTRKIHAVIVGADRVAANGDT 542
V ++RP +G L L IP T ++ + V +M + V++GA + ANG
Sbjct: 412 VIVVDSRPGCEGQELLR-RLHATGIPCTYVLINAVGYVM--AEATKVLLGAHALLANGYV 468
Query: 541 ANKIGTYQIAIVAKYHDVPFYV 476
+ GT Q+A+VA H+VP V
Sbjct: 469 MARTGTAQVALVANAHNVPVLV 490
>AE013599-3594|AAF46995.1| 626|Drosophila melanogaster CG10315-PA,
isoform A protein.
Length = 626
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = -3
Query: 721 VFCTETRPYNQGARLTAYELVHEKIPSTLIVDSMVSALMHTRKIHAVIVGADRVAANGDT 542
V ++RP +G L L IP T ++ + V +M + V++GA + ANG
Sbjct: 462 VIVVDSRPGCEGQELLR-RLHATGIPCTYVLINAVGYVM--AEATKVLLGAHALLANGYV 518
Query: 541 ANKIGTYQIAIVAKYHDVPFYV 476
+ GT Q+A+VA H+VP V
Sbjct: 519 MARTGTAQVALVANAHNVPVLV 540
>BT023760-1|AAZ41768.1| 576|Drosophila melanogaster RE55357p
protein.
Length = 576
Score = 39.1 bits (87), Expect = 0.008
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = -3
Query: 721 VFCTETRPYNQGARLTAYELVHEKIPSTLIVDSMVSALMHTRKIHAVIVGADRVAANGDT 542
V ++RP +G L L IP T ++ + V +M + V++GA + ANG
Sbjct: 412 VIVVDSRPGCEGQELLR-RLHATGIPCTYVLINAVGYVMV--EATKVLLGAHALLANGYV 468
Query: 541 ANKIGTYQIAIVAKYHDVPFYV 476
+ GT Q+A+VA H+VP V
Sbjct: 469 MARTGTAQVALVANAHNVPVLV 490
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,363,826
Number of Sequences: 53049
Number of extensions: 749569
Number of successful extensions: 1411
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1411
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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