Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11p02
         (313 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC121046-1|AAI21047.1|  153|Homo sapiens ADAM18 protein protein.       29   2.9  
BC121045-1|AAI21046.1|  739|Homo sapiens ADAM metallopeptidase d...    29   2.9  
AY358321-1|AAQ88687.1|  715|Homo sapiens ADAM18 protein.               29   2.9  
AJ133004-1|CAB40812.1|  739|Homo sapiens tMDC III protein protein.     29   2.9  
AC073275-1|AAQ93366.1|  111|Homo sapiens unknown protein.              28   6.7  
Z98882-1|CAI95591.1|  756|Homo sapiens RAB11 family interacting ...    27   8.8  
BC051360-1|AAH51360.1|  756|Homo sapiens RAB11 family interactin...    27   8.8  
AY130007-1|AAN05091.1|  225|Homo sapiens MU-MB-17.148 protein.         27   8.8  
AL049542-2|CAI95788.1|  756|Homo sapiens RAB11 family interactin...    27   8.8  
AL023881-6|CAI95593.1|  756|Homo sapiens RAB11 family interactin...    27   8.8  
AF395731-1|AAL12940.1|  756|Homo sapiens eferin protein.               27   8.8  
AE006463-12|AAK61232.1|  756|Homo sapiens unknown function protein.    27   8.8  
AB014565-1|BAA31640.2|  760|Homo sapiens KIAA0665 protein protein.     27   8.8  

>BC121046-1|AAI21047.1|  153|Homo sapiens ADAM18 protein protein.
          Length = 153

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 118 WEDLSFCIGYPFFKIFWLVEKKEQSNRKRC 207
           W  LSFCI  PFF +F  V  K     K C
Sbjct: 102 WFILSFCIFLPFFIVFTTVIFKRNEISKSC 131


>BC121045-1|AAI21046.1|  739|Homo sapiens ADAM metallopeptidase
           domain 18 protein.
          Length = 739

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 118 WEDLSFCIGYPFFKIFWLVEKKEQSNRKRC 207
           W  LSFCI  PFF +F  V  K     K C
Sbjct: 688 WFILSFCIFLPFFIVFTTVIFKRNEISKSC 717


>AY358321-1|AAQ88687.1|  715|Homo sapiens ADAM18 protein.
          Length = 715

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 118 WEDLSFCIGYPFFKIFWLVEKKEQSNRKRC 207
           W  LSFCI  PFF +F  V  K     K C
Sbjct: 664 WFILSFCIFLPFFIVFTTVIFKRNEISKSC 693


>AJ133004-1|CAB40812.1|  739|Homo sapiens tMDC III protein protein.
          Length = 739

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 118 WEDLSFCIGYPFFKIFWLVEKKEQSNRKRC 207
           W  LSFCI  PFF +F  V  K     K C
Sbjct: 688 WFILSFCIFLPFFIVFTTVIFKRNEISKSC 717


>AC073275-1|AAQ93366.1|  111|Homo sapiens unknown protein.
          Length = 111

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +2

Query: 125 ICLFVLVTHSSKYFGWLKKKNNPTGN---DVYIAIL 223
           +C+++    +  YF +LK KN P  N   DVY  IL
Sbjct: 40  VCIYIYKRKTYIYFNYLKCKNLPNTNGKSDVYYIIL 75


>Z98882-1|CAI95591.1|  756|Homo sapiens RAB11 family interacting
           protein 3 (class II) protein.
          Length = 756

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = -2

Query: 108 QHDREAIQKLIQDMRKKQMQSLE 40
           Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 612 QRDKEATQELIEDLR-KQLEHLQ 633


>BC051360-1|AAH51360.1|  756|Homo sapiens RAB11 family interacting
           protein 3 (class II) protein.
          Length = 756

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = -2

Query: 108 QHDREAIQKLIQDMRKKQMQSLE 40
           Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 612 QRDKEATQELIEDLR-KQLEHLQ 633


>AY130007-1|AAN05091.1|  225|Homo sapiens MU-MB-17.148 protein.
          Length = 225

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = -2

Query: 108 QHDREAIQKLIQDMRKKQMQSLE 40
           Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 81  QRDKEATQELIEDLR-KQLEHLQ 102


>AL049542-2|CAI95788.1|  756|Homo sapiens RAB11 family interacting
           protein 3 (class II) protein.
          Length = 756

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = -2

Query: 108 QHDREAIQKLIQDMRKKQMQSLE 40
           Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 612 QRDKEATQELIEDLR-KQLEHLQ 633


>AL023881-6|CAI95593.1|  756|Homo sapiens RAB11 family interacting
           protein 3 (class II) protein.
          Length = 756

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = -2

Query: 108 QHDREAIQKLIQDMRKKQMQSLE 40
           Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 612 QRDKEATQELIEDLR-KQLEHLQ 633


>AF395731-1|AAL12940.1|  756|Homo sapiens eferin protein.
          Length = 756

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = -2

Query: 108 QHDREAIQKLIQDMRKKQMQSLE 40
           Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 612 QRDKEATQELIEDLR-KQLEHLQ 633


>AE006463-12|AAK61232.1|  756|Homo sapiens unknown function protein.
          Length = 756

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = -2

Query: 108 QHDREAIQKLIQDMRKKQMQSLE 40
           Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 612 QRDKEATQELIEDLR-KQLEHLQ 633


>AB014565-1|BAA31640.2|  760|Homo sapiens KIAA0665 protein protein.
          Length = 760

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = -2

Query: 108 QHDREAIQKLIQDMRKKQMQSLE 40
           Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 616 QRDKEATQELIEDLR-KQLEHLQ 637


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,872,070
Number of Sequences: 237096
Number of extensions: 1060447
Number of successful extensions: 2107
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2107
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)