Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11o08
(821 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 367 e-100
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 295 9e-79
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 242 6e-63
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 195 1e-48
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 167 4e-40
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 165 9e-40
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 163 6e-39
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 158 1e-37
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 153 5e-36
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 145 1e-33
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 136 8e-31
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 135 1e-30
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 130 4e-29
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 117 3e-25
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 115 2e-24
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 112 9e-24
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 105 1e-21
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 103 5e-21
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 84 4e-15
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 81 3e-14
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 81 3e-14
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 79 1e-13
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 78 3e-13
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 77 5e-13
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 72 2e-11
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 71 3e-11
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 71 3e-11
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 70 8e-11
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 68 2e-10
UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ... 64 3e-09
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 59 2e-07
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 54 6e-06
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 50 5e-05
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 42 0.025
UniRef50_Q5AGI4 Cluster: Putative uncharacterized protein; n=2; ... 40 0.075
UniRef50_Q7KKH3 Cluster: Protein SDA1 homolog; n=4; Coelomata|Re... 38 0.40
UniRef50_A6GVL2 Cluster: Putative cell surface protein SprD; n=1... 37 0.70
UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila pseudoobscu... 37 0.70
UniRef50_A6SNX0 Cluster: Predicted protein; n=1; Botryotinia fuc... 37 0.70
UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr prote... 35 2.1
UniRef50_Q9C5C0 Cluster: Mitogen-activated protein kinase 18; n=... 35 2.1
UniRef50_O60293 Cluster: Coiled-coil domain-containing protein 1... 35 2.1
UniRef50_UPI000150A5BE Cluster: hypothetical protein TTHERM_0006... 35 2.8
UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_Q6NE17 Cluster: Putative erythrocyte-binding protein MA... 34 3.7
UniRef50_Q23DJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_A2G612 Cluster: SNF7 family protein; n=2; Trichomonas v... 33 8.6
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 367 bits (903), Expect = e-100
Identities = 175/229 (76%), Positives = 202/229 (88%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNRRR+ RKGPLII+NK
Sbjct: 19 VSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRLHRKGPLIIYNK 78
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQ 461
DQGLTR+FRNIPGV+ LAPGGH+GRF+IWTQSAF RLD +FGSWKTPSK+
Sbjct: 79 DQGLTRSFRNIPGVDMVNVNKLNLLHLAPGGHVGRFMIWTQSAFERLDAIFGSWKTPSKE 138
Query: 460 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAA 281
KKNFNLPQPKMANTDL+RLLKS+EIR+VLRAP KRV+RATRKLNPLTN KAMLKLNPYAA
Sbjct: 139 KKNFNLPQPKMANTDLSRLLKSEEIRRVLRAPIKRVVRATRKLNPLTNTKAMLKLNPYAA 198
Query: 280 VLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRKNI 134
VLK+KA+L+ +RKN +AL AEK G+KL +PA+KA KL+E+R K+I
Sbjct: 199 VLKKKAVLDQVKRKNKRALEVAEKRGIKLPDDDPAVKALKLKEKRAKSI 247
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 295 bits (724), Expect = 9e-79
Identities = 141/227 (62%), Positives = 175/227 (77%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GPL++++K
Sbjct: 157 VSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDK 216
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQ 461
D+GL +AFRNIPG+E LAPGGH+GRFVIWT+SAF RL+ LFG+WK PS
Sbjct: 217 DEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTL 276
Query: 460 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAA 281
KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNPYA
Sbjct: 277 KKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAE 336
Query: 280 VLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRK 140
VLKR+A L +R K LA A+K ++L+K + A A K R K
Sbjct: 337 VLKRRAALAAEKRTVAKVLAKAKKQNVELAKSHFANVATKAAANRAK 383
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 242 bits (593), Expect = 6e-63
Identities = 118/221 (53%), Positives = 151/221 (68%), Gaps = 1/221 (0%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+
Sbjct: 154 VEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE 213
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQ 461
D G+ +AFRNIPG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ +
Sbjct: 214 DNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASL 273
Query: 460 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAA 281
K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAK 333
Query: 280 VLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMKAEK 161
++R IL R L+ A A + L+ A A K
Sbjct: 334 TMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAAVAGK 374
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 195 bits (476), Expect = 1e-48
Identities = 104/210 (49%), Positives = 137/210 (65%), Gaps = 3/210 (1%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V D I KT +AV L++L A++DI KV S+ +R+GKGKMRNRR +QR+GPL+++++
Sbjct: 157 VDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMRNRRYVQRRGPLVVYSE 216
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQ 461
D G+TRAFRNIPGVE LAPGGH+GRF+IWT+SAF +LD +FG+ + S
Sbjct: 217 DNGVTRAFRNIPGVELCSVDRLGLLTLAPGGHVGRFIIWTKSAFEKLDSIFGTSTSKSAS 276
Query: 460 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR--ATRKLNPLTNNKAMLKLNPY 287
KK + P MA TDLTRL+ SDEI+ L AP IR A K NPL N AM KLNPY
Sbjct: 277 KKGWKPPTNIMAQTDLTRLINSDEIQSALNAPKLGAIRAHAPLKRNPLKNKSAMDKLNPY 336
Query: 286 AAVLKR-KAILELRRRKNLKALADAEKSGL 200
A V + +A + R K A ++A +S +
Sbjct: 337 AKVAREMQARAQEERSKAKAAKSNAARSAV 366
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 167 bits (405), Expect = 4e-40
Identities = 89/188 (47%), Positives = 119/188 (63%), Gaps = 8/188 (4%)
Frame = -2
Query: 799 INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG---L 629
I KT AV L+ + A +D K S++LRAGKGK+R RR QR+GPL+I+N D+ L
Sbjct: 140 IRKTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDEDGKEL 199
Query: 628 TRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNF 449
+AFRNIPGVE LAPGGHLGRF++WT SAFG LD ++GS PS KK+F
Sbjct: 200 VKAFRNIPGVETSSVYSMNLLQLAPGGHLGRFIVWTSSAFGALDTIYGSTTEPSALKKDF 259
Query: 448 NLPQPKMANTDLTRLLKSDEIRKVLR-----APNKRVIRATRKLNPLTNNKAMLKLNPYA 284
LP M DL++++ S +I+KVLR A +KR + +K NPL N + L+LNPYA
Sbjct: 260 LLPSTMMKQPDLSKIINSSDIQKVLRPVRGGAVSKRGV--VQKKNPLKNFQVQLRLNPYA 317
Query: 283 AVLKRKAI 260
A ++ +
Sbjct: 318 ATFSKEKL 325
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 165 bits (402), Expect = 9e-40
Identities = 91/221 (41%), Positives = 131/221 (59%), Gaps = 2/221 (0%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FN 644
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++ RKGPL++ FN
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFN 60
Query: 643 KDQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSK 464
++ L +AFRN+PGVE LAPGG LGRFVIWTQSAF LD LFG+++ S
Sbjct: 61 ENAKLLKAFRNVPGVEVVNVTRLNLLQLAPGGQLGRFVIWTQSAFANLDKLFGTYRYSSI 120
Query: 463 QKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPY 287
K + L +P + N DL R++ S++++ KV A V+ +K NPL N+KA+ +LNPY
Sbjct: 121 LKDGYQLLRPLLTNPDLARIINSNQVQEKVQAAKQTTVLHEVQKKNPLKNSKALDRLNPY 180
Query: 286 AAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAE 164
A ++R A A +G K K+N A+K +
Sbjct: 181 AK----------KQRAAATAAVKAHTTGTKKIKKNKALKKQ 211
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 163 bits (395), Expect = 6e-39
Identities = 90/219 (41%), Positives = 129/219 (58%), Gaps = 2/219 (0%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FN 644
V DK++ KT A+ FL+R A+ D+ KV ++ +RAG K R ++ RKGPL++ FN
Sbjct: 155 VEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKKYRVRKGPLVVYFN 214
Query: 643 KDQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSK 464
++ L +AFRN+PGVE LAPGG LGRFVIWTQSAF LD LFG+++ S
Sbjct: 215 ENAKLLKAFRNVPGVEVVNVTRLNLLQLAPGGQLGRFVIWTQSAFAHLDKLFGTYRYASV 274
Query: 463 QKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPY 287
K + L +P + N DL R++ S++++ KV A +V+ +K NPL N KAM +LNPY
Sbjct: 275 LKDGYQLLRPLLTNPDLARIINSNQVQEKVQPAKTTKVLHDVQKKNPLKNTKAMDRLNPY 334
Query: 286 AAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMK 170
A + A+ ++ A G K K+N A+K
Sbjct: 335 AKKQRAAAVAAIK----------ANTKGTKKIKKNKALK 363
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 158 bits (384), Expect = 1e-37
Identities = 86/210 (40%), Positives = 130/210 (61%), Gaps = 2/210 (0%)
Frame = -2
Query: 808 VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF-NKDQG 632
+ I KTKQAV L+++ A+SD+LKV S+ +RAG+GKMR R+ +RKGPL+++ N D
Sbjct: 159 ISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKIKERKGPLVVYGNDDLQ 218
Query: 631 LTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKN 452
+AFRNIPGV+ LAPG H+GRF+IWT+SAF +L+ +FG+ K ++ K
Sbjct: 219 AVKAFRNIPGVDTCRVENLSVLNLAPGCHIGRFIIWTESAFKKLNTIFGTQKKMAQGKSG 278
Query: 451 FNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI-RATRKLNPLTNNKAMLKLNPYAAVL 275
F + +MA D+ R++ + E K+LRA K V+ + ++ NPL N AM+KLNPYA +
Sbjct: 279 FRIAHAQMAVPDMKRVVVAAEKAKLLRA--KIVLPKVPKRANPLKNWAAMVKLNPYAKIA 336
Query: 274 KRKAILELRRRKNLKALADAEKSGLKLSKR 185
K + + KA A+ + +K+
Sbjct: 337 SHKLAQVAKAQAAHKAQYAAKMEKILAAKK 366
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 153 bits (371), Expect = 5e-36
Identities = 82/187 (43%), Positives = 117/187 (62%), Gaps = 6/187 (3%)
Frame = -2
Query: 802 EINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN---KDQG 632
+I +T A L+ + A D+ KV S++LRAGKGK+R RR QR+GPL++++ +
Sbjct: 162 KIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRRHRQRRGPLVVYDGATDGKE 221
Query: 631 LTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKN 452
L RAFRN+PGVE LAPGGHLGRF+IW+ SAF LD ++G+ PS KK+
Sbjct: 222 LVRAFRNLPGVETCDVYSLNLLQLAPGGHLGRFIIWSSSAFKALDNIYGTTTAPSALKKD 281
Query: 451 FNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI--RA-TRKLNPLTNNKAMLKLNPYAA 281
F LP ++ D+ RL+ S E++ V+RA + RA +K NPL N + +L+LNPYAA
Sbjct: 282 FLLPSNVVSQADIGRLINSSELQSVIRAAKGSALTKRAGVQKKNPLLNKQVLLRLNPYAA 341
Query: 280 VLKRKAI 260
++ I
Sbjct: 342 GYSKEKI 348
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 145 bits (352), Expect = 1e-33
Identities = 77/180 (42%), Positives = 113/180 (62%), Gaps = 6/180 (3%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V+D V++I KTK+AV L LKA D+ +S+R+R G GK RNRR QR+G LI+ ++
Sbjct: 154 VSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQRRGVLIVHDQ 213
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQ 461
++GL AFRNI GV+ LAPGGHLGRF+IWT+ A+ +LD L+G+ +
Sbjct: 214 NEGLANAFRNISGVDISNVXRLNIRDLAPGGHLGRFIIWTEGAYKKLDKLYGTRFRTALL 273
Query: 460 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRA---PNKRVIRATRKL---NPLTNNKAMLK 299
K + P P + NTDL+R++ S ++ VL+A +K++I R L + L+ N A +K
Sbjct: 274 KNEYKHPTPSVTNTDLSRIIHSPTVQSVLKARGKQSKKIINVRRNLLIASKLSQNNARIK 333
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 136 bits (328), Expect = 8e-31
Identities = 69/191 (36%), Positives = 111/191 (58%)
Frame = -2
Query: 817 ADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKD 638
++ ++ + KTK A+ FL L ++ ++ KS +LRA GKMRNR+ GPLII++ D
Sbjct: 155 SNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRKYKISNGPLIIYSXD 214
Query: 637 QGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQK 458
G+ +AFRNIPGV+ LAPGG +GR IW++ AF +LD ++G K
Sbjct: 215 SGIKKAFRNIPGVDLCNVTKLNLLKLAPGGSIGRLCIWSEDAFKKLDVIYGKTFQKYVTK 274
Query: 457 KNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAV 278
KN+ LP+P + N D+ R++ SD+++ L + T+ N LTN +LNP +
Sbjct: 275 KNYILPKPIVNNADIYRIINSDQVQASLLDKKSPCKKRTQNKNSLTNFAVRCRLNPAYKL 334
Query: 277 LKRKAILELRR 245
L+ A+ ++++
Sbjct: 335 LRALAVRKMKK 345
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 135 bits (327), Expect = 1e-30
Identities = 80/226 (35%), Positives = 121/226 (53%), Gaps = 7/226 (3%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRL-KAWSDILK-VYKSQRLRAGKGKMRNRRRIQRKGPLIIF 647
+++++Q INKT AV F + K + +K + S +R GKGKMRNRRR+ GPL+++
Sbjct: 155 ISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRRVCAVGPLVVY 214
Query: 646 NKDQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPS 467
+D G+ +A RNI GV+ LAPGG GR I+T+ A RL ++GS+ S
Sbjct: 215 AEDNGIVKAMRNIKGVDTCSVERLNLLRLAPGGTFGRLTIFTKGAIKRLQEIYGSYTHGS 274
Query: 466 KQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPN-----KRVIRATRKLNPLTNNKAML 302
K + LP+P M N D+TR++ S E++ VLR + R+ K N LTN
Sbjct: 275 SSKVGYTLPRPAMTNADITRIINSTEVQSVLRPLRGFRCMGSMGRSKTKKNNLTNLTKRA 334
Query: 301 KLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAE 164
LNP L++ A L L A+ +K+ + K++ K+E
Sbjct: 335 CLNPAYTSLRKSARLAQIPGTRLHAIKQRQKAANRALKKSIKQKSE 380
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 130 bits (314), Expect = 4e-29
Identities = 64/177 (36%), Positives = 107/177 (60%)
Frame = -2
Query: 799 INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRA 620
+ KTK A+ ++ + D+ + S+ +RAG+GKMRNRR I RKGPL+I+N + + R
Sbjct: 149 VTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRRYITRKGPLVIYNTED-VARG 207
Query: 619 FRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLP 440
FRN+PGV+ LAPG H GR ++WT+SAF LD ++ + K+N+ LP
Sbjct: 208 FRNLPGVDLCHVSSIRLLELAPGSHPGRLILWTKSAFASLDDVYAA-------KQNYTLP 260
Query: 439 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKR 269
+ + TD+ R+L+SD ++K P + + RK++P ++ +A+ +L+P V+ +
Sbjct: 261 RSCITQTDIERILQSDAVQKTF-VPKRDPLVIERKVDPFSSKEALARLDPSGTVMPK 316
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 117 bits (282), Expect = 3e-25
Identities = 73/211 (34%), Positives = 114/211 (54%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V D VQEI +T+ AV L+++ + D+ +V R+ KGK R +KGPL+I+N+
Sbjct: 151 VVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKKGPLVIYNE 210
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQ 461
D+G+ +AFRNIPGVE LAP +GR +WT+SAF LD ++ S
Sbjct: 211 DKGIVKAFRNIPGVETISVKALALAKLAPAAQVGRLTVWTESAFKALDGIYES------- 263
Query: 460 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAA 281
KK F+LP+ M N D+ ++ SD ++ VL K V+ PL + KL+ A
Sbjct: 264 KKRFSLPRSIMTNADIEAVITSDAVQSVLN-EKKEVV-------PLPKCRCCKKLSVGAC 315
Query: 280 VLKRKAILELRRRKNLKALADAEKSGLKLSK 188
+KA+ E+ L+A +A+++ ++ K
Sbjct: 316 EDWQKALKEV---AELRAAQEAKRTSPEVVK 343
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 115 bits (276), Expect = 2e-24
Identities = 62/152 (40%), Positives = 86/152 (56%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V+D + + KTK AV LR L ++ +V KS+ +R GKGKMRNRR QRKG LI+ +
Sbjct: 151 VSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKGILIVHGE 210
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQ 461
+ FRNI GV+ LAPGG GR +IWT+SAF +LD +FG + ++
Sbjct: 211 SSEML-GFRNIRGVDQMSIDSLDLLELAPGGVAGRLIIWTESAFEKLDKIFGGVEREAEL 269
Query: 460 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 365
F LP + + DL L SD ++ +L P
Sbjct: 270 TPGFKLPNRIVTHDDLEELFYSDAVQAILDEP 301
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 112 bits (270), Expect = 9e-24
Identities = 54/123 (43%), Positives = 77/123 (62%), Gaps = 1/123 (0%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
+ D + + KT A+ L++ A+ D K S + GKGKMRNRR I RKGPLI++
Sbjct: 17 IGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRNRRYISRKGPLIVYGM 76
Query: 640 DQG-LTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSK 464
+ L +AFRNIPGVE LAPGGHLGRFVIWT+S+F +LD ++ S++ +
Sbjct: 77 EGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGHLGRFVIWTKSSFEKLDSIYRSFEKKLR 136
Query: 463 QKK 455
+++
Sbjct: 137 RRR 139
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 105 bits (252), Expect = 1e-21
Identities = 70/175 (40%), Positives = 96/175 (54%), Gaps = 1/175 (0%)
Frame = -2
Query: 811 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 632
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G II+N+D G
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNG 157
Query: 631 LTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKN 452
+ +A +E G W ++A L ++ P + N
Sbjct: 158 IIKASET--SLESLYLIAFCKLDDLYG-------TWPKAA-----SLKSNYNLPMHKMLN 203
Query: 451 FNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV-IRATRKLNPLTNNKAMLKLNP 290
+L +R+LK I++ LRAP KR+ R +K NPL N + MLKLNP
Sbjct: 204 TDL----------SRILKRPGIQRALRAPRKRIHRRVLKKKNPLKNLRLMLKLNP 248
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 103 bits (247), Expect = 5e-21
Identities = 52/118 (44%), Positives = 71/118 (60%)
Frame = -2
Query: 514 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 335
AF +LD L+G+W + K N+NLP KM NTDL+R+LKS EI++ L+AP K++ R K
Sbjct: 95 AFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQRALQAPRKKIHRRVLK 154
Query: 334 LNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEK 161
NPL N MLKLNPYA ++R I LR+ KN K D + L+ + +K
Sbjct: 155 KNPLKNLGIMLKLNPYAKTMRRNTI--LRQAKNHKLRMDKSAAALEAKSEEKGVPGKK 210
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 686
V DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 17 VEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 84.2 bits (199), Expect = 4e-15
Identities = 36/103 (34%), Positives = 63/103 (61%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V+++++ + +TK R + ++D+ + + +R RAG+GKMR RR +++K L++ K
Sbjct: 141 VSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVKKKSVLLVVGK 200
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSA 512
D G+ +A +N+PGV+ LAPG H GR +WT+SA
Sbjct: 201 DDGVVKAAKNLPGVDAVVVKDLNVELLAPGCHPGRLTVWTKSA 243
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 81.0 bits (191), Expect = 3e-14
Identities = 40/91 (43%), Positives = 59/91 (64%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V D +Q KTK+A+ FL+ + A D+ +V S+ +RAG+GKMRNRR + R+GP+++
Sbjct: 153 VEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRGPMLVMPN 212
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGG 548
++G TRAFRNI G++ LAPGG
Sbjct: 213 NKG-TRAFRNIFGLDLANVSALTLLHLAPGG 242
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/112 (33%), Positives = 63/112 (56%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V D+++ +NK ++ F + + W+D+ + ++R+RAGKGK R RR ++ K LI+ ++
Sbjct: 148 VVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRRYVKPKSVLIVVDE 207
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFG 485
D+G+ RN PGV+ LAPG H GR ++T A L+ G
Sbjct: 208 DEGIKLGARNHPGVDVVEAMHLGVEHLAPGAHPGRLTVFTPGALEVLEERLG 259
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 79.4 bits (187), Expect = 1e-13
Identities = 57/164 (34%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V D +++INKTK AV L + +++ ++ K G+ R+ R+ + GPLII
Sbjct: 153 VDDAIEQINKTKDAVKLLETIGLGAELKRIDKVT------GRARDGRKKRPVGPLIILRA 206
Query: 640 D--QGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPS 467
+G RAFRNIPGVE LAP G LGR +W++SAF LD
Sbjct: 207 TAVEG-KRAFRNIPGVEVACVERLNLLKLAPAGALGRLCVWSKSAFEALDDYIKM----- 260
Query: 466 KQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 335
+P + N DL+ L++S ++ LRAP + +ATRK
Sbjct: 261 -------MPTKLLKNADLSALIESTPVQAALRAPREGTPKATRK 297
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 77.8 bits (183), Expect = 3e-13
Identities = 37/111 (33%), Positives = 62/111 (55%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
+ D+++ + TK+ + L DI++ K +++++GKGK+R R+ KGPL++
Sbjct: 144 IDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGRKYRTPKGPLVVVGN 203
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLF 488
D+G++ RN GV+ LAPG H GR I+T+SA +L LF
Sbjct: 204 DRGISLGARNHAGVDVVEVNNINAELLAPGTHAGRLTIYTKSAIEKLGDLF 254
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 77.0 bits (181), Expect = 5e-13
Identities = 43/107 (40%), Positives = 60/107 (56%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V D V+ INKTK A+ L+ L + DI + + + +RAG+GKMR RR Q K LI+
Sbjct: 145 VEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRRYKQPKSVLIVARN 204
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRL 500
+ +AFR++PGV+ LAPGG GR I+T+ A L
Sbjct: 205 SSAM-KAFRSLPGVDIASPNSLSIRKLAPGGVGGRLTIFTEGAIESL 250
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 72.1 bits (169), Expect = 2e-11
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FN 644
V D + + T + FL+++ + D+ +V + R+RAGKGKMR R+ + GPLII +
Sbjct: 150 VTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRKYKEPIGPLIIVHD 209
Query: 643 KDQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 497
+ + +A RN+ GV+ LAPG H GR I+T+S+ LD
Sbjct: 210 SNSPIIKAARNLAGVDVVNAKDVSVIHLAPGAHPGRLTIYTESSIKILD 258
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 71.3 bits (167), Expect = 3e-11
Identities = 38/110 (34%), Positives = 62/110 (56%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
+ D +++I KT+ + L L + I++ ++L++GKGKMRNRR + GPL++F
Sbjct: 149 IEDSIEKIPKTRDLIKILTTLGI-NSIVRNKLKRKLKSGKGKMRNRRFKKPTGPLLVFKN 207
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 491
+ ++ RNI ++ LAPGGHLGR IW+ AF L+ +
Sbjct: 208 N---LKSLRNIANIDCMKISALNLTKLAPGGHLGRLCIWSSKAFQMLNTI 254
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 71.3 bits (167), Expect = 3e-11
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V ++IN+ K+A L W D+ + + ++RAGKGKMR RR + K L++ +
Sbjct: 171 VVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRRYKEPKSVLVVVSD 230
Query: 640 -DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLF 488
+ L A RN PGV+ LAPGG GR +WT A +L LF
Sbjct: 231 LNAPLIAAVRNFPGVDVVAVNNLNILVLAPGGVPGRLTLWTAPAVEKLRGLF 282
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 69.7 bits (163), Expect = 8e-11
Identities = 35/98 (35%), Positives = 54/98 (55%)
Frame = -2
Query: 790 TKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRN 611
T++ V + L +D+ + + +RAGKG MR R+ K L++ ++ GL +A RN
Sbjct: 207 TRKFVAMMEGLGLGADLDRARTGRTIRAGKGTMRGRKYRTPKSILLVVSQTNGLAKAARN 266
Query: 610 IPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 497
IPGV+ LAPGG GR +WT++A G L+
Sbjct: 267 IPGVDIVVAKDLSAEDLAPGGDAGRLTVWTKAAIGALE 304
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 68.1 bits (159), Expect = 2e-10
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V D ++++ KTK+ L +L ++ +VY+ +R RAGKGK R R I+RKGPLI+ N
Sbjct: 155 VVDGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRRGRAYIERKGPLIVVND 213
Query: 640 -DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRL 500
++ L +A NIPG++ LAPG GR +I ++ A L
Sbjct: 214 YNEQLFKAVDNIPGLDIEEVPNLNVELLAPGAKPGRLLIISKDALETL 261
>UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal
protein L4; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L4 - Rattus norvegicus
Length = 140
Score = 64.5 bits (150), Expect = 3e-09
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Frame = -2
Query: 433 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL- 257
KM N+DL+R+LK EI++ L+AP K + K NPLTN + MLKLNP A + R IL
Sbjct: 3 KMMNSDLSRILKIPEIQRALQAPCKEIQHRVSKKNPLTNLRIMLKLNPDAKTMHRNTILP 62
Query: 256 ELRRRK-NLKALADAEKSGLKLS---KRNPAMKAEKLRERRRK 140
E R K +K+ ++G +L R A K + RK
Sbjct: 63 EARNHKLQVKSRKQQPRTGSQLGAGCSRGTADKKPAIGREERK 105
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 58.8 bits (136), Expect = 2e-07
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = -2
Query: 802 EINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LT 626
+I+ ++A L + + D+L+ + +R AGKGKMR RR K L + + L
Sbjct: 162 KISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGRRYKVPKSVLFVLEDPRSPLA 221
Query: 625 RAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLF 488
A + +PGV+ LAPGGH GR I+T A L F
Sbjct: 222 LAVKGMPGVDVVTPTLLSVLHLAPGGHPGRLTIYTTEALKLLSRRF 267
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 53.6 bits (123), Expect = 6e-06
Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = -2
Query: 814 DKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKD- 638
D ++ + KT+ AV L + ++ +V ++R + KGK R GPL++
Sbjct: 155 DTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKR-KGKKRP------VGPLVVMRSTA 207
Query: 637 -QGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 497
+G RAFRNIPGV+ LAP G LGR VI+++SAF LD
Sbjct: 208 VEG-KRAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIFSKSAFELLD 254
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 50.4 bits (115), Expect = 5e-05
Identities = 31/107 (28%), Positives = 56/107 (52%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
V+D +++ KT++ V L L +DI + ++ +++AG+G R R+ +R ++
Sbjct: 140 VSDDFEDLVKTQEVVSLLEALDVHADIDRADET-KIKAGQGSARGRK-YRRPASILFVTS 197
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRL 500
D+ T A RN+ G + LAPGG GR ++T+SA +
Sbjct: 198 DEPSTAA-RNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEV 243
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 41.5 bits (93), Expect = 0.025
Identities = 25/107 (23%), Positives = 49/107 (45%)
Frame = -2
Query: 820 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK 641
++D ++ ++K + L L ++D+ ++ + ++ R GK +R R + K L +
Sbjct: 149 ISDDIESVSKASEVRKILSALGLFADVNRL-EGRKPRTGKSALRGRPKKIGKSILFVVGA 207
Query: 640 DQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRL 500
D + RA PGV LAPG R +++++A L
Sbjct: 208 DGPVIRAVGGFPGVTARPARDLSVLDLAPGAEPARLTVYSKAAIESL 254
>UniRef50_Q5AGI4 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 197
Score = 39.9 bits (89), Expect = 0.075
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = -2
Query: 376 LRAPNKRV-IRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGL 200
+R +KR+ IR ++K+ + + + M + N +KRK I+ +++R+N+K + +K
Sbjct: 1 MRERSKRIMIRRSKKIMNMKSKRNMKERNKKIMNVKRK-IMNMKKRRNMKKRRNMKKRKN 59
Query: 199 KLSKRNPAMKAEKLRERRRK 140
+RN K +K ER++K
Sbjct: 60 MKKRRNMKRKRKKTMERKKK 79
>UniRef50_Q7KKH3 Cluster: Protein SDA1 homolog; n=4; Coelomata|Rep:
Protein SDA1 homolog - Drosophila melanogaster (Fruit
fly)
Length = 712
Score = 37.5 bits (83), Expect = 0.40
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -2
Query: 466 KQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKL 296
K+KK+ + K A +L TR+ ++ +++ A K+ + + RK PL ++A +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624
Query: 295 NPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMKAEKLRERRRKN 137
N + K++ + R + ++A D E+ G K + N +R+ KN
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKN 678
>UniRef50_A6GVL2 Cluster: Putative cell surface protein SprD; n=1;
Flavobacterium psychrophilum JIP02/86|Rep: Putative cell
surface protein SprD - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 1286
Score = 36.7 bits (81), Expect = 0.70
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = -2
Query: 361 KRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRN 182
K +++AT+K NP T N + K P +R L L+ K+ KA A+AEK +
Sbjct: 310 KPIVKATKKTNPGTKNATVNKKTPADLQKERAEALALKTEKD-KARAEAEKVRKAKELAD 368
Query: 181 PAMKAEKLRERRR 143
KAE L R+
Sbjct: 369 AKEKAEVLAALRK 381
>UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila
pseudoobscura|Rep: GA20803-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 655
Score = 36.7 bits (81), Expect = 0.70
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Frame = -2
Query: 487 GSWKTPSKQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNN 314
G W T + + + K A +L TR+ ++ +++ A K+ + +RK PL +
Sbjct: 502 GQWVTVNHSDGDLKILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTNSRK-RPLEQD 560
Query: 313 KA-MLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMKAEKLRERRRK 140
+A +KLN + K++ + R + ++A D E+ G K + N +R+ K
Sbjct: 561 RAEFVKLNSIEMIFKKRKHDKESRMETVQAGRQDRERFGWKDGRVNEHCSKTNSEKRKTK 620
Query: 139 N 137
N
Sbjct: 621 N 621
>UniRef50_A6SNX0 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 1521
Score = 36.7 bits (81), Expect = 0.70
Identities = 26/91 (28%), Positives = 47/91 (51%)
Frame = -2
Query: 412 TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNL 233
TRL+ E R+ + A N++ ++A + +N+A L+ A+ KR +E R+RK
Sbjct: 975 TRLISQAE-REEIEA-NRQRVQAAAQARKENSNRARLEGRKAASAKKRT--VEYRKRKEK 1030
Query: 232 KALADAEKSGLKLSKRNPAMKAEKLRERRRK 140
+ + +A K G L + +KL E+R +
Sbjct: 1031 ELIEEAHKEGRILGNSELEARLDKLMEKRER 1061
>UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 966
Score = 35.9 bits (79), Expect = 1.2
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = -2
Query: 439 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 260
Q K AN + RLL S+ + ++P+ ++ KLNP++ N + L LN + L +K++
Sbjct: 330 QHKRANIQV-RLLSSEISKNQSQSPSNNILNQQNKLNPISTNTSQL-LNKQISQLNQKSL 387
Query: 259 LELRRRKNLKALADAEK-SGLKLSKRNPAMKAEKLRERRRKN 137
+ + + ++ A S + S +N ++ R +KN
Sbjct: 388 TQRSQILSKSPISQAANISSMYFSPQNKNSIFQRDRSISQKN 429
>UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr protein;
n=1; Bos taurus|Rep: PREDICTED: similar to Hrnr protein
- Bos taurus
Length = 1606
Score = 35.1 bits (77), Expect = 2.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 531 SSGLSPHSAGLTPYSGHGRHHRNKRRTSTCPSQR 430
SSG H +GL+ S +G+H R++S+C QR
Sbjct: 566 SSGFGQHGSGLSQSSSYGQHGSTSRQSSSCGQQR 599
>UniRef50_Q9C5C0 Cluster: Mitogen-activated protein kinase 18; n=73;
Viridiplantae|Rep: Mitogen-activated protein kinase 18 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 603
Score = 35.1 bits (77), Expect = 2.1
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = -2
Query: 421 TDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYA-AVLKRKAILELRR 245
TDL KS+ I V ++ + RK NP+T ++ K +P A +L+R + +
Sbjct: 232 TDLLGTPKSETISGVRNDKARKYLTEMRKKNPVTFSQKFSKADPLALRLLQRLLAFDPKD 291
Query: 244 RKN-LKALADAEKSGLKLSKRNPA----MKAEKLRERRR 143
R +ALAD GL +R P+ K E ERRR
Sbjct: 292 RPTPAEALADPYFKGLSKIEREPSSQQISKMEFEFERRR 330
>UniRef50_O60293 Cluster: Coiled-coil domain-containing protein 131;
n=26; Amniota|Rep: Coiled-coil domain-containing protein
131 - Homo sapiens (Human)
Length = 1989
Score = 35.1 bits (77), Expect = 2.1
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = -2
Query: 499 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 326
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 762 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 821
Query: 325 LTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRER 149
+T ++ + LK+ IL ++ LK L E + K S RN K KL E+
Sbjct: 822 VTK-----QVTDAESKLKKHRILLMKDESVLKNLVQQE-AKKKESVRNAEAKITKLTEQ 874
>UniRef50_UPI000150A5BE Cluster: hypothetical protein
TTHERM_00069200; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00069200 - Tetrahymena
thermophila SB210
Length = 560
Score = 34.7 bits (76), Expect = 2.8
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = -2
Query: 469 SKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP----NKRVIRATRKLNPLTNNKAML 302
++ KK L + K + + ++I K++ P NK + +N L+ N
Sbjct: 49 TQNKKKIQLMEDKYTEIERENRILLEKITKIMNPPKTTSNKNQYQDQSVMNRLSRNNNYS 108
Query: 301 KLNPYAAVLKRKAILELRRRKNLKALADAEKSGL-KLSKRNPAMKAEKLRERRRKN 137
+ ++ K+K++ +L RRK L ++ + K L ++ R K E +KN
Sbjct: 109 TIQQ-SSYTKKKSLNQLNRRKELLSIMEENKKILERIKSRKSEYDHRKWEEDHKKN 163
>UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 987
Score = 34.7 bits (76), Expect = 2.8
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -2
Query: 277 LKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERR 146
+K K+ ++ ++K KALA E+ +KL KAEKL ERR
Sbjct: 410 IKSKSFRKVEKKKKEKALAKREEELMKLDPEFAKHKAEKLEERR 453
>UniRef50_Q6NE17 Cluster: Putative erythrocyte-binding protein
MAEBL; n=1; Leptospira phage LE1|Rep: Putative
erythrocyte-binding protein MAEBL - Leptospira phage LE1
Length = 859
Score = 34.3 bits (75), Expect = 3.7
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = -2
Query: 460 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAA 281
KKN +LP+ + +L++++ + + +K I + RK L+ ++ ++ A
Sbjct: 304 KKNSSLPKSQTETKELSKVVNEQDPIETKITQSKNKIDSIRKDKSLSEDEFRTEIEKARA 363
Query: 280 VLKRKAILELRRRKNLKALADAEK 209
L R A+ E + R K+L+D EK
Sbjct: 364 EL-RSAMKEKQARDGFKSLSDLEK 386
>UniRef50_Q23DJ6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1067
Score = 33.1 bits (72), Expect = 8.6
Identities = 22/96 (22%), Positives = 42/96 (43%)
Frame = -2
Query: 520 QSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRAT 341
+S F L + + NLP + + L+ + ++L ++R T
Sbjct: 552 ESQFDNNLSLIDDIENEQSMSNSSNLPLVSNQASAINIKLQEKDFYELLNLESERAAITT 611
Query: 340 RKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNL 233
+K+N + NNK +LK V + ++ L++ KNL
Sbjct: 612 KKINRIHNNKMVLKSAFEVNVQQSDEVILLKQEKNL 647
>UniRef50_A2G612 Cluster: SNF7 family protein; n=2; Trichomonas
vaginalis G3|Rep: SNF7 family protein - Trichomonas
vaginalis G3
Length = 199
Score = 33.1 bits (72), Expect = 8.6
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = -2
Query: 397 SDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALAD 218
SD++ + + +K + RKL+ LT M L+RKA L+RRK L+
Sbjct: 23 SDQLGRKSESIDKEIAEINRKLSELTKQMKMPSNKSRVPTLRRKATELLKRRKMLEGF-Q 81
Query: 217 AEKSGLKLSKRNPAMKAEKLR 155
+ G + + N A + ++++
Sbjct: 82 GKIDGQRFNIDNMAFQQQQMK 102
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,919,888
Number of Sequences: 1657284
Number of extensions: 13857568
Number of successful extensions: 38248
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 36385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38172
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 70914189703
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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