Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11o01
         (843 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058741-1|AAL13970.1| 1261|Drosophila melanogaster LP06813p pro...    31   2.0  
AE013599-1841|AAF58281.4| 4012|Drosophila melanogaster CG30069-P...    31   2.0  

>AY058741-1|AAL13970.1| 1261|Drosophila melanogaster LP06813p protein.
          Length = 1261

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 18/79 (22%), Positives = 34/79 (43%)
 Frame = -3

Query: 709  GTENVRGTDIAIDQVETSEAAATKRGIGTVNVIATGNENIVKKEGRLTSAPVVDLEIATS 530
            GTE + GTD++   +E++ +  T +  G ++       ++       TS+ V+     TS
Sbjct: 871  GTEIITGTDVSSTAIESNRSHLTDKNTGDISSKVISGGSVSNNVTGETSSRVISGRNVTS 930

Query: 529  T*LRYHKSTSIRGENMKED 473
                   S  + G N+  D
Sbjct: 931  NITENSTSRVMSGRNVSSD 949


>AE013599-1841|AAF58281.4| 4012|Drosophila melanogaster CG30069-PA
            protein.
          Length = 4012

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 18/79 (22%), Positives = 34/79 (43%)
 Frame = -3

Query: 709  GTENVRGTDIAIDQVETSEAAATKRGIGTVNVIATGNENIVKKEGRLTSAPVVDLEIATS 530
            GTE + GTD++   +E++ +  T +  G ++       ++       TS+ V+     TS
Sbjct: 3622 GTEIITGTDVSSTAIESNRSHLTDKNTGDISSKVISGGSVSNNVTGETSSRVISGRNVTS 3681

Query: 529  T*LRYHKSTSIRGENMKED 473
                   S  + G N+  D
Sbjct: 3682 NITENSTSRVMSGRNVSSD 3700


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,047,241
Number of Sequences: 53049
Number of extensions: 625628
Number of successful extensions: 1337
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)