Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11n04
(852 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17519-2|CAB43537.1| 363|Homo sapiens Leu-8 antigen short form ... 42 0.002
X17519-1|CAB43536.1| 385|Homo sapiens protein ( Human mRNA for ... 42 0.002
X16150-1|CAA34275.1| 372|Homo sapiens protein ( Human Lyam-1 mR... 42 0.002
X16070-1|CAA34203.1| 372|Homo sapiens pln homing receptor protein. 42 0.002
M32414-1|AAB60700.1| 372|Homo sapiens protein ( Human leukocyte... 42 0.002
M25280-1|AAC63053.1| 372|Homo sapiens LNHR protein. 42 0.002
BC020758-1|AAH20758.1| 375|Homo sapiens SELL protein protein. 42 0.002
AY233976-1|AAO48272.1| 372|Homo sapiens selectin L (lymphocyte ... 42 0.002
AL021940-1|CAI19356.1| 385|Homo sapiens selectin L (lymphocyte ... 42 0.002
AJ246000-1|CAB55488.1| 385|Homo sapiens L-selectin protein. 42 0.002
BC035581-1|AAH35581.1| 801|Homo sapiens PR domain containing 4 ... 33 1.00
AL133083-1|CAB61401.1| 725|Homo sapiens hypothetical protein pr... 33 1.00
DQ413174-1|ABD83327.1| 650|Homo sapiens actin-binding LIM prote... 33 1.7
BC001665-1|AAH01665.1| 544|Homo sapiens ABLIM3 protein protein. 33 1.7
AB075881-1|BAD38663.1| 169|Homo sapiens putative protein produc... 33 1.7
AB020650-1|BAA74866.2| 691|Homo sapiens KIAA0843 protein protein. 33 1.7
BC060789-1|AAH60789.1| 742|Homo sapiens collectin sub-family me... 32 2.3
AL713657-1|CAD28466.1| 417|Homo sapiens hypothetical protein pr... 32 2.3
AF144757-1|AAD55249.2| 801|Homo sapiens PR-domain zinc-finger p... 32 2.3
AB038518-1|BAB39147.1| 742|Homo sapiens scavenger receptor with... 32 2.3
AB034251-1|BAD83592.1| 742|Homo sapiens nurse cell scavenger re... 32 2.3
AB005145-1|BAB72147.1| 742|Homo sapiens collectin placenta 1 pr... 32 2.3
M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein. 32 3.0
J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein. 32 3.0
DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein. 32 3.0
BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C typ... 32 3.0
AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C typ... 32 3.0
AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C typ... 32 3.0
AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C typ... 32 3.0
BC093046-1|AAH93046.1| 592|Homo sapiens signal peptide peptidas... 31 5.3
BC028391-1|AAH28391.2| 511|Homo sapiens signal peptide peptidas... 31 5.3
BC001788-1|AAH01788.1| 117|Homo sapiens SPPL2B protein protein. 31 5.3
AY169315-1|AAO12540.1| 592|Homo sapiens intramembrane protease ... 31 5.3
AJ420897-1|CAD13134.1| 564|Homo sapiens SPPL2b protein protein. 31 5.3
AJ345027-1|CAC87788.1| 592|Homo sapiens presenilin-like protein... 31 5.3
AB040965-1|BAA96056.1| 601|Homo sapiens KIAA1532 protein protein. 31 5.3
M10058-1|AAA51785.1| 291|Homo sapiens ASGR1 protein. 25 5.5
CR542052-1|CAG46849.1| 291|Homo sapiens ASGR1 protein. 25 5.5
BT019873-1|AAV38676.1| 291|Homo sapiens asialoglycoprotein rece... 25 5.5
BC032130-1|AAH32130.1| 291|Homo sapiens asialoglycoprotein rece... 25 5.5
AB070933-1|BAB83508.1| 291|Homo sapiens Asialoglycoprotein rece... 25 5.5
X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific proteo... 31 7.0
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 31 7.0
J05062-1|AAA35726.1| 480|Homo sapiens protein ( Human cartilage... 31 7.0
>X17519-2|CAB43537.1| 363|Homo sapiens Leu-8 antigen short form
protein.
Length = 363
Score = 42.3 bits (95), Expect = 0.002
Identities = 34/137 (24%), Positives = 58/137 (42%)
Frame = -2
Query: 719 VDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTSGRKCNFAGCDRGDLQP 540
++W AR CR + D V+++ E E++++ + Y W RK G +
Sbjct: 61 MNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIRKI-------GGI-- 110
Query: 539 PNVNGWFWSGSGAKIGPTTQRNTGDWSYTGGYGQAQPDNREAAQGNDESCLAILNNFYND 360
W W G+ + + +W G +P+N++ N E C+ I D
Sbjct: 111 -----WTWVGTNKSLTEEAE----NW------GDGEPNNKK----NKEDCVEIYIKRNKD 151
Query: 359 GIKWHDVACHHVKPFVC 309
KW+D ACH +K +C
Sbjct: 152 AGKWNDDACHKLKAALC 168
>X17519-1|CAB43536.1| 385|Homo sapiens protein ( Human mRNA for
Leu-8 pan leukocyte antigen. ).
Length = 385
Score = 42.3 bits (95), Expect = 0.002
Identities = 34/137 (24%), Positives = 58/137 (42%)
Frame = -2
Query: 719 VDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTSGRKCNFAGCDRGDLQP 540
++W AR CR + D V+++ E E++++ + Y W RK G +
Sbjct: 61 MNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIRKI-------GGI-- 110
Query: 539 PNVNGWFWSGSGAKIGPTTQRNTGDWSYTGGYGQAQPDNREAAQGNDESCLAILNNFYND 360
W W G+ + + +W G +P+N++ N E C+ I D
Sbjct: 111 -----WTWVGTNKSLTEEAE----NW------GDGEPNNKK----NKEDCVEIYIKRNKD 151
Query: 359 GIKWHDVACHHVKPFVC 309
KW+D ACH +K +C
Sbjct: 152 AGKWNDDACHKLKAALC 168
>X16150-1|CAA34275.1| 372|Homo sapiens protein ( Human Lyam-1 mRNA
for leukocyte adhesion molecule-1. ).
Length = 372
Score = 42.3 bits (95), Expect = 0.002
Identities = 34/137 (24%), Positives = 58/137 (42%)
Frame = -2
Query: 719 VDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTSGRKCNFAGCDRGDLQP 540
++W AR CR + D V+++ E E++++ + Y W RK G +
Sbjct: 48 MNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIRKI-------GGI-- 97
Query: 539 PNVNGWFWSGSGAKIGPTTQRNTGDWSYTGGYGQAQPDNREAAQGNDESCLAILNNFYND 360
W W G+ + + +W G +P+N++ N E C+ I D
Sbjct: 98 -----WTWVGTNKSLTEEAE----NW------GDGEPNNKK----NKEDCVEIYIKRNKD 138
Query: 359 GIKWHDVACHHVKPFVC 309
KW+D ACH +K +C
Sbjct: 139 AGKWNDDACHKLKAALC 155
>X16070-1|CAA34203.1| 372|Homo sapiens pln homing receptor protein.
Length = 372
Score = 42.3 bits (95), Expect = 0.002
Identities = 34/137 (24%), Positives = 58/137 (42%)
Frame = -2
Query: 719 VDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTSGRKCNFAGCDRGDLQP 540
++W AR CR + D V+++ E E++++ + Y W RK G +
Sbjct: 48 MNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIRKI-------GGI-- 97
Query: 539 PNVNGWFWSGSGAKIGPTTQRNTGDWSYTGGYGQAQPDNREAAQGNDESCLAILNNFYND 360
W W G+ + + +W G +P+N++ N E C+ I D
Sbjct: 98 -----WTWVGTNKSLTEEAE----NW------GDGEPNNKK----NKEDCVEIYIKRNKD 138
Query: 359 GIKWHDVACHHVKPFVC 309
KW+D ACH +K +C
Sbjct: 139 AGKWNDDACHKLKAALC 155
>M32414-1|AAB60700.1| 372|Homo sapiens protein ( Human leukocyte
adhesion molecule-1 (LAM-1), exon 9. ).
Length = 372
Score = 42.3 bits (95), Expect = 0.002
Identities = 34/137 (24%), Positives = 58/137 (42%)
Frame = -2
Query: 719 VDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTSGRKCNFAGCDRGDLQP 540
++W AR CR + D V+++ E E++++ + Y W RK G +
Sbjct: 48 MNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIRKI-------GGI-- 97
Query: 539 PNVNGWFWSGSGAKIGPTTQRNTGDWSYTGGYGQAQPDNREAAQGNDESCLAILNNFYND 360
W W G+ + + +W G +P+N++ N E C+ I D
Sbjct: 98 -----WTWVGTNKSLTEEAE----NW------GDGEPNNKK----NKEDCVEIYIKRNKD 138
Query: 359 GIKWHDVACHHVKPFVC 309
KW+D ACH +K +C
Sbjct: 139 AGKWNDDACHKLKAALC 155
>M25280-1|AAC63053.1| 372|Homo sapiens LNHR protein.
Length = 372
Score = 42.3 bits (95), Expect = 0.002
Identities = 34/137 (24%), Positives = 58/137 (42%)
Frame = -2
Query: 719 VDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTSGRKCNFAGCDRGDLQP 540
++W AR CR + D V+++ E E++++ + Y W RK G +
Sbjct: 48 MNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIRKI-------GGI-- 97
Query: 539 PNVNGWFWSGSGAKIGPTTQRNTGDWSYTGGYGQAQPDNREAAQGNDESCLAILNNFYND 360
W W G+ + + +W G +P+N++ N E C+ I D
Sbjct: 98 -----WTWVGTNKSLTEEAE----NW------GDGEPNNKK----NKEDCVEIYIKRNKD 138
Query: 359 GIKWHDVACHHVKPFVC 309
KW+D ACH +K +C
Sbjct: 139 AGKWNDDACHKLKAALC 155
>BC020758-1|AAH20758.1| 375|Homo sapiens SELL protein protein.
Length = 375
Score = 42.3 bits (95), Expect = 0.002
Identities = 34/137 (24%), Positives = 58/137 (42%)
Frame = -2
Query: 719 VDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTSGRKCNFAGCDRGDLQP 540
++W AR CR + D V+++ E E++++ + Y W RK G +
Sbjct: 61 MNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIRKI-------GGI-- 110
Query: 539 PNVNGWFWSGSGAKIGPTTQRNTGDWSYTGGYGQAQPDNREAAQGNDESCLAILNNFYND 360
W W G+ + + +W G +P+N++ N E C+ I D
Sbjct: 111 -----WTWVGTNKSLTEEAE----NW------GDGEPNNKK----NKEDCVEIYIKRNKD 151
Query: 359 GIKWHDVACHHVKPFVC 309
KW+D ACH +K +C
Sbjct: 152 AGKWNDDACHKLKAALC 168
>AY233976-1|AAO48272.1| 372|Homo sapiens selectin L (lymphocyte
adhesion molecule 1) protein.
Length = 372
Score = 42.3 bits (95), Expect = 0.002
Identities = 34/137 (24%), Positives = 58/137 (42%)
Frame = -2
Query: 719 VDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTSGRKCNFAGCDRGDLQP 540
++W AR CR + D V+++ E E++++ + Y W RK G +
Sbjct: 48 MNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIRKI-------GGI-- 97
Query: 539 PNVNGWFWSGSGAKIGPTTQRNTGDWSYTGGYGQAQPDNREAAQGNDESCLAILNNFYND 360
W W G+ + + +W G +P+N++ N E C+ I D
Sbjct: 98 -----WTWVGTNKSLTEEAE----NW------GDGEPNNKK----NKEDCVEIYIKRNKD 138
Query: 359 GIKWHDVACHHVKPFVC 309
KW+D ACH +K +C
Sbjct: 139 AGKWNDDACHKLKAALC 155
>AL021940-1|CAI19356.1| 385|Homo sapiens selectin L (lymphocyte
adhesion molecule 1) protein.
Length = 385
Score = 42.3 bits (95), Expect = 0.002
Identities = 34/137 (24%), Positives = 58/137 (42%)
Frame = -2
Query: 719 VDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTSGRKCNFAGCDRGDLQP 540
++W AR CR + D V+++ E E++++ + Y W RK G +
Sbjct: 61 MNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIRKI-------GGI-- 110
Query: 539 PNVNGWFWSGSGAKIGPTTQRNTGDWSYTGGYGQAQPDNREAAQGNDESCLAILNNFYND 360
W W G+ + + +W G +P+N++ N E C+ I D
Sbjct: 111 -----WTWVGTNKSLTEEAE----NW------GDGEPNNKK----NKEDCVEIYIKRNKD 151
Query: 359 GIKWHDVACHHVKPFVC 309
KW+D ACH +K +C
Sbjct: 152 AGKWNDDACHKLKAALC 168
>AJ246000-1|CAB55488.1| 385|Homo sapiens L-selectin protein.
Length = 385
Score = 42.3 bits (95), Expect = 0.002
Identities = 34/137 (24%), Positives = 58/137 (42%)
Frame = -2
Query: 719 VDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTSGRKCNFAGCDRGDLQP 540
++W AR CR + D V+++ E E++++ + Y W RK G +
Sbjct: 61 MNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIRKI-------GGI-- 110
Query: 539 PNVNGWFWSGSGAKIGPTTQRNTGDWSYTGGYGQAQPDNREAAQGNDESCLAILNNFYND 360
W W G+ + + +W G +P+N++ N E C+ I D
Sbjct: 111 -----WTWVGTNKSLTEEAE----NW------GDGEPNNKK----NKEDCVEIYIKRNKD 151
Query: 359 GIKWHDVACHHVKPFVC 309
KW+D ACH +K +C
Sbjct: 152 AGKWNDDACHKLKAALC 168
>BC035581-1|AAH35581.1| 801|Homo sapiens PR domain containing 4
protein.
Length = 801
Score = 33.5 bits (73), Expect = 1.00
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 509 NLTRTNRSHLEAVGHRGHSRRNYIYDQKSKCNVCFRE--RSFALQIRFPGVFLRKQRPCN 682
+LT +HL GH G ++ ++K KC++C + L + F G K C+
Sbjct: 562 HLTSHIHNHLPTQGHSGSHGPSHSKERKWKCSMCPQAFISPSKLHVHFMGHMGMKPHKCD 621
Query: 683 ACGRCSLRPAN 715
C + P+N
Sbjct: 622 FCSKAFSDPSN 632
>AL133083-1|CAB61401.1| 725|Homo sapiens hypothetical protein
protein.
Length = 725
Score = 33.5 bits (73), Expect = 1.00
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 509 NLTRTNRSHLEAVGHRGHSRRNYIYDQKSKCNVCFRE--RSFALQIRFPGVFLRKQRPCN 682
+LT +HL GH G ++ ++K KC++C + L + F G K C+
Sbjct: 486 HLTSHIHNHLPTQGHSGSHGPSHSKERKWKCSMCPQAFISPSKLHVHFMGHMGMKPHKCD 545
Query: 683 ACGRCSLRPAN 715
C + P+N
Sbjct: 546 FCSKAFSDPSN 556
>DQ413174-1|ABD83327.1| 650|Homo sapiens actin-binding LIM protein
3 protein.
Length = 650
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 561 TAGEITFTTRSPNVTYVSASDPLLYKFVFLGCF*GNSVHAMPAADV 698
TAG SP Y++ SDPL+ K L + N +H P+AD+
Sbjct: 524 TAGYEMSLNGSPRSHYLADSDPLISKSASLPAYRRNGLHRTPSADL 569
>BC001665-1|AAH01665.1| 544|Homo sapiens ABLIM3 protein protein.
Length = 544
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 561 TAGEITFTTRSPNVTYVSASDPLLYKFVFLGCF*GNSVHAMPAADV 698
TAG SP Y++ SDPL+ K L + N +H P+AD+
Sbjct: 446 TAGYEMSLNGSPRSHYLADSDPLISKSASLPAYRRNGLHRTPSADL 491
>AB075881-1|BAD38663.1| 169|Homo sapiens putative protein product
of HMFN1661 protein.
Length = 169
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 561 TAGEITFTTRSPNVTYVSASDPLLYKFVFLGCF*GNSVHAMPAADV 698
TAG SP Y++ SDPL+ K L + N +H P+AD+
Sbjct: 43 TAGYEMSLNGSPRSHYLADSDPLISKSASLPAYRRNGLHRTPSADL 88
>AB020650-1|BAA74866.2| 691|Homo sapiens KIAA0843 protein protein.
Length = 691
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 561 TAGEITFTTRSPNVTYVSASDPLLYKFVFLGCF*GNSVHAMPAADV 698
TAG SP Y++ SDPL+ K L + N +H P+AD+
Sbjct: 565 TAGYEMSLNGSPRSHYLADSDPLISKSASLPAYRRNGLHRTPSADL 610
>BC060789-1|AAH60789.1| 742|Homo sapiens collectin sub-family
member 12 protein.
Length = 742
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Frame = -2
Query: 497 IGPTTQRNTGDWSYTGG-------YGQAQPDNREAAQGNDESCLAILNNFYNDGIKWHDV 339
IG T +W + G + QPDN G E C ++ Y +W+D
Sbjct: 666 IGLTDSERENEWKWLDGTSPDYKNWKAGQPDNWGHGHGPGEDCAGLI---YAG--QWNDF 720
Query: 338 ACHHVKPFVCEDSDE 294
C V F+CE E
Sbjct: 721 QCEDVNNFICEKDRE 735
>AL713657-1|CAD28466.1| 417|Homo sapiens hypothetical protein
protein.
Length = 417
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Frame = -2
Query: 497 IGPTTQRNTGDWSYTGG-------YGQAQPDNREAAQGNDESCLAILNNFYNDGIKWHDV 339
IG T +W + G + QPDN G E C ++ Y +W+D
Sbjct: 341 IGLTDSERENEWKWLDGTSPDYKNWKAGQPDNWGHGHGPGEDCAGLI---YAG--QWNDF 395
Query: 338 ACHHVKPFVCEDSDE 294
C V F+CE E
Sbjct: 396 QCEDVNNFICEKDRE 410
>AF144757-1|AAD55249.2| 801|Homo sapiens PR-domain zinc-finger
protein PFM1 protein.
Length = 801
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 509 NLTRTNRSHLEAVGHRGHSRRNYIYDQKSKCNVCFRE--RSFALQIRFPGVFLRKQRPCN 682
+LT +HL GH G ++ ++K KC++C + L + F G K C+
Sbjct: 562 HLTSHIHNHLPTQGHSGSIGPSHSKERKWKCSMCPQAFISPSKLHVYFMGHMGMKPHKCD 621
Query: 683 ACGRCSLRPAN 715
C + P+N
Sbjct: 622 FCSKAFSDPSN 632
>AB038518-1|BAB39147.1| 742|Homo sapiens scavenger receptor with
C-type lectin type I protein.
Length = 742
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Frame = -2
Query: 497 IGPTTQRNTGDWSYTGG-------YGQAQPDNREAAQGNDESCLAILNNFYNDGIKWHDV 339
IG T +W + G + QPDN G E C ++ Y +W+D
Sbjct: 666 IGLTDSERENEWKWLDGTSPDYKNWKAGQPDNWGHGHGPGEDCAGLI---YAG--QWNDF 720
Query: 338 ACHHVKPFVCEDSDE 294
C V F+CE E
Sbjct: 721 QCEDVNNFICEKDRE 735
>AB034251-1|BAD83592.1| 742|Homo sapiens nurse cell scavenger
receptor 2 protein.
Length = 742
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Frame = -2
Query: 497 IGPTTQRNTGDWSYTGG-------YGQAQPDNREAAQGNDESCLAILNNFYNDGIKWHDV 339
IG T +W + G + QPDN G E C ++ Y +W+D
Sbjct: 666 IGLTDSERENEWKWLDGTSPDYKNWKAGQPDNWGHGHGPGEDCAGLI---YAG--QWNDF 720
Query: 338 ACHHVKPFVCEDSDE 294
C V F+CE E
Sbjct: 721 QCEDVNNFICEKDRE 735
>AB005145-1|BAB72147.1| 742|Homo sapiens collectin placenta 1
protein.
Length = 742
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Frame = -2
Query: 497 IGPTTQRNTGDWSYTGG-------YGQAQPDNREAAQGNDESCLAILNNFYNDGIKWHDV 339
IG T +W + G + QPDN G E C ++ Y +W+D
Sbjct: 666 IGLTDSERENEWKWLDGTSPDYKNWKAGQPDNWGHGHGPGEDCAGLI---YAG--QWNDF 720
Query: 338 ACHHVKPFVCEDSDE 294
C V F+CE E
Sbjct: 721 QCEDVNNFICEKDRE 735
>M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 31.9 bits (69), Expect = 3.0
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 458 YTGGYGQAQPDNREAAQG-NDESCLAILNNFYNDGIKWHDVACHHVKPFVCE 306
YT +G+ P R ++ D C+ I+ N+ KW D C + ++C+
Sbjct: 1030 YTN-WGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein.
Length = 1456
Score = 31.9 bits (69), Expect = 3.0
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 458 YTGGYGQAQPDNREAAQG-NDESCLAILNNFYNDGIKWHDVACHHVKPFVCE 306
YT +G+ P R ++ D C+ I+ N+ KW D C + ++C+
Sbjct: 1030 YTN-WGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 31.9 bits (69), Expect = 3.0
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 458 YTGGYGQAQPDNREAAQG-NDESCLAILNNFYNDGIKWHDVACHHVKPFVCE 306
YT +G+ P R ++ D C+ I+ N+ KW D C + ++C+
Sbjct: 1030 YTN-WGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 31.9 bits (69), Expect = 3.0
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 458 YTGGYGQAQPDNREAAQG-NDESCLAILNNFYNDGIKWHDVACHHVKPFVCE 306
YT +G+ P R ++ D C+ I+ N+ KW D C + ++C+
Sbjct: 1030 YTN-WGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C type 1
protein.
Length = 1456
Score = 31.9 bits (69), Expect = 3.0
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 458 YTGGYGQAQPDNREAAQG-NDESCLAILNNFYNDGIKWHDVACHHVKPFVCE 306
YT +G+ P R ++ D C+ I+ N+ KW D C + ++C+
Sbjct: 1030 YTN-WGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 31.9 bits (69), Expect = 3.0
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 458 YTGGYGQAQPDNREAAQG-NDESCLAILNNFYNDGIKWHDVACHHVKPFVCE 306
YT +G+ P R ++ D C+ I+ N+ KW D C + ++C+
Sbjct: 1030 YTN-WGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 31.9 bits (69), Expect = 3.0
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 458 YTGGYGQAQPDNREAAQG-NDESCLAILNNFYNDGIKWHDVACHHVKPFVCE 306
YT +G+ P R ++ D C+ I+ N+ KW D C + ++C+
Sbjct: 1030 YTN-WGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>BC093046-1|AAH93046.1| 592|Homo sapiens signal peptide
peptidase-like 2B protein.
Length = 592
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 535 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 657
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 276 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 313
>BC028391-1|AAH28391.2| 511|Homo sapiens signal peptide
peptidase-like 2B protein.
Length = 511
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 535 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 657
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 276 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 313
>BC001788-1|AAH01788.1| 117|Homo sapiens SPPL2B protein protein.
Length = 117
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 535 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 657
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 74 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 111
>AY169315-1|AAO12540.1| 592|Homo sapiens intramembrane protease
protein.
Length = 592
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 535 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 657
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 276 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 313
>AJ420897-1|CAD13134.1| 564|Homo sapiens SPPL2b protein protein.
Length = 564
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 535 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 657
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 248 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 285
>AJ345027-1|CAC87788.1| 592|Homo sapiens presenilin-like protein 1
protein.
Length = 592
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 535 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 657
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 276 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 313
>AB040965-1|BAA96056.1| 601|Homo sapiens KIAA1532 protein protein.
Length = 601
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 535 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 657
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 285 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 322
>M10058-1|AAA51785.1| 291|Homo sapiens ASGR1 protein.
Length = 291
Score = 25.0 bits (52), Expect(2) = 5.5
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 713 WLDARNICRRHCMDAVSLETPQENEFVKQRIARGN 609
W DA N CR V + + +E +FV+ I N
Sbjct: 175 WADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVN 209
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -2
Query: 518 WSGSGAKIGPTTQRNTGDWSYTG--GYGQAQPDNREA-AQGNDESCLAILNNFYNDGIKW 348
W G + GP + D+ TG + QPD+ G E C +F +DG +W
Sbjct: 211 WMGLHDQNGPWKWVDGTDYE-TGFKNWRPEQPDDWYGHGLGGGEDCA----HFTDDG-RW 264
Query: 347 HDVACHHVKPFVCE 306
+D C +VCE
Sbjct: 265 NDDVCQRPYRWVCE 278
>CR542052-1|CAG46849.1| 291|Homo sapiens ASGR1 protein.
Length = 291
Score = 25.0 bits (52), Expect(2) = 5.5
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 713 WLDARNICRRHCMDAVSLETPQENEFVKQRIARGN 609
W DA N CR V + + +E +FV+ I N
Sbjct: 175 WADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVN 209
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -2
Query: 518 WSGSGAKIGPTTQRNTGDWSYTG--GYGQAQPDNREA-AQGNDESCLAILNNFYNDGIKW 348
W G + GP + D+ TG + QPD+ G E C +F +DG +W
Sbjct: 211 WMGLHDQNGPWKWVDGTDYE-TGFKNWRPEQPDDWYGHGLGGGEDCA----HFTDDG-RW 264
Query: 347 HDVACHHVKPFVCE 306
+D C +VCE
Sbjct: 265 NDDVCQRPYRWVCE 278
>BT019873-1|AAV38676.1| 291|Homo sapiens asialoglycoprotein
receptor 1 protein.
Length = 291
Score = 25.0 bits (52), Expect(2) = 5.5
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 713 WLDARNICRRHCMDAVSLETPQENEFVKQRIARGN 609
W DA N CR V + + +E +FV+ I N
Sbjct: 175 WADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVN 209
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -2
Query: 518 WSGSGAKIGPTTQRNTGDWSYTG--GYGQAQPDNREA-AQGNDESCLAILNNFYNDGIKW 348
W G + GP + D+ TG + QPD+ G E C +F +DG +W
Sbjct: 211 WMGLHDQNGPWKWVDGTDYE-TGFKNWRPEQPDDWYGHGLGGGEDCA----HFTDDG-RW 264
Query: 347 HDVACHHVKPFVCE 306
+D C +VCE
Sbjct: 265 NDDVCQRPYRWVCE 278
>BC032130-1|AAH32130.1| 291|Homo sapiens asialoglycoprotein
receptor 1 protein.
Length = 291
Score = 25.0 bits (52), Expect(2) = 5.5
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 713 WLDARNICRRHCMDAVSLETPQENEFVKQRIARGN 609
W DA N CR V + + +E +FV+ I N
Sbjct: 175 WADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVN 209
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -2
Query: 518 WSGSGAKIGPTTQRNTGDWSYTG--GYGQAQPDNREA-AQGNDESCLAILNNFYNDGIKW 348
W G + GP + D+ TG + QPD+ G E C +F +DG +W
Sbjct: 211 WMGLHDQNGPWKWVDGTDYE-TGFKNWRPEQPDDWYGHGLGGGEDCA----HFTDDG-RW 264
Query: 347 HDVACHHVKPFVCE 306
+D C +VCE
Sbjct: 265 NDDVCQRPYRWVCE 278
>AB070933-1|BAB83508.1| 291|Homo sapiens Asialoglycoprotein
receptor 1 protein.
Length = 291
Score = 25.0 bits (52), Expect(2) = 5.5
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 713 WLDARNICRRHCMDAVSLETPQENEFVKQRIARGN 609
W DA N CR V + + +E +FV+ I N
Sbjct: 175 WADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVN 209
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -2
Query: 518 WSGSGAKIGPTTQRNTGDWSYTG--GYGQAQPDNREA-AQGNDESCLAILNNFYNDGIKW 348
W G + GP + D+ TG + QPD+ G E C +F +DG +W
Sbjct: 211 WMGLHDQNGPWKWVDGTDYE-TGFKNWRPEQPDDWYGHGLGGGEDCA----HFTDDG-RW 264
Query: 347 HDVACHHVKPFVCE 306
+D C +VCE
Sbjct: 265 NDDVCQRPYRWVCE 278
>X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific
proteoglycan (600 AA) protein.
Length = 600
Score = 30.7 bits (66), Expect = 7.0
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 749 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFV 633
+ H P R W+DA CR S+ TP+E EFV
Sbjct: 402 YRHFPDRET---WVDAERRCREQQSHLSSIVTPEEQEFV 437
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 30.7 bits (66), Expect = 7.0
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 749 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFV 633
+ H P R W+DA CR S+ TP+E EFV
Sbjct: 2179 YRHFPDRET---WVDAERRCREQQSHLSSIVTPEEQEFV 2214
>J05062-1|AAA35726.1| 480|Homo sapiens protein ( Human
cartilage-specific proteoglycan core protein (CSPCP)
mRNA, 3' end. ).
Length = 480
Score = 30.7 bits (66), Expect = 7.0
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 749 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFV 633
+ H P R W+DA CR S+ TP+E EFV
Sbjct: 282 YRHFPDRET---WVDAERRCREQQSHLSSIVTPEEQEFV 317
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,099,856
Number of Sequences: 237096
Number of extensions: 2941179
Number of successful extensions: 11394
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 10946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11394
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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