Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11m23
(866 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012483-1|AAS93754.1| 326|Drosophila melanogaster LD45673p pro... 30 3.6
AE014296-3442|AAF51653.2| 445|Drosophila melanogaster CG11456-P... 30 3.6
BT024211-1|ABC86273.1| 902|Drosophila melanogaster RE30796p pro... 29 6.3
AY118849-1|AAM50709.1| 880|Drosophila melanogaster GM15606p pro... 29 6.3
AY051552-1|AAK92976.1| 418|Drosophila melanogaster GH20109p pro... 29 6.3
AE014296-1259|AAF50560.2| 418|Drosophila melanogaster CG8560-PA... 29 6.3
AE014134-1892|AAF52956.3| 880|Drosophila melanogaster CG6232-PA... 29 6.3
BT021222-1|AAX33370.1| 822|Drosophila melanogaster RH55640p pro... 29 8.3
AY060822-1|AAL28370.1| 641|Drosophila melanogaster GM01081p pro... 29 8.3
AE014134-2947|AAF53680.2| 822|Drosophila melanogaster CG10333-P... 29 8.3
>BT012483-1|AAS93754.1| 326|Drosophila melanogaster LD45673p
protein.
Length = 326
Score = 30.3 bits (65), Expect = 3.6
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 504 KRSKFKFEIRLCMTACRNCTKWVAF*SCGRMAVEIM*HTRCETPIWKAILISLSAKV-PP 328
K FKF+ M +C K +F SC +E+ RC +WKA + + V P
Sbjct: 105 KECPFKFQDATKMELHCSCHKGGSF-SCCECGMELPNWRRCSAHLWKAHQVDVDLLVCPV 163
Query: 327 FEKN 316
FE N
Sbjct: 164 FECN 167
>AE014296-3442|AAF51653.2| 445|Drosophila melanogaster CG11456-PA
protein.
Length = 445
Score = 30.3 bits (65), Expect = 3.6
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 504 KRSKFKFEIRLCMTACRNCTKWVAF*SCGRMAVEIM*HTRCETPIWKAILISLSAKV-PP 328
K FKF+ M +C K +F SC +E+ RC +WKA + + V P
Sbjct: 105 KECPFKFQDATKMELHCSCHKGGSF-SCCECGMELPNWRRCSAHLWKAHQVDVDLLVCPV 163
Query: 327 FEKN 316
FE N
Sbjct: 164 FECN 167
>BT024211-1|ABC86273.1| 902|Drosophila melanogaster RE30796p
protein.
Length = 902
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -2
Query: 271 NLKKRFIENKFVFDIHNHRSDNNIPKSPKIVIKYLSDKNVNFFKSITLVDDLPT 110
N K+ ++EN+ I N +SD + KS I+ ++ + + FKS+ LP+
Sbjct: 100 NNKEEYLENETTSKISN-KSDEKVLKSSTIISLNATNPSTSTFKSVLETTTLPS 152
>AY118849-1|AAM50709.1| 880|Drosophila melanogaster GM15606p
protein.
Length = 880
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -2
Query: 271 NLKKRFIENKFVFDIHNHRSDNNIPKSPKIVIKYLSDKNVNFFKSITLVDDLPT 110
N K+ ++EN+ I N +SD + KS I+ ++ + + FKS+ LP+
Sbjct: 78 NNKEEYLENETASKISN-KSDEKVLKSTTIISLNATNPSTSTFKSVLETTTLPS 130
>AY051552-1|AAK92976.1| 418|Drosophila melanogaster GH20109p
protein.
Length = 418
Score = 29.5 bits (63), Expect = 6.3
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 406 YCHTTTRLKRNPFRAIPASCH-TQTNLEFEF 495
Y HTTTR+ R + I ++C+ T N F+F
Sbjct: 228 YSHTTTRMWRKTRKPISSACYGTDANRNFDF 258
>AE014296-1259|AAF50560.2| 418|Drosophila melanogaster CG8560-PA
protein.
Length = 418
Score = 29.5 bits (63), Expect = 6.3
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 406 YCHTTTRLKRNPFRAIPASCH-TQTNLEFEF 495
Y HTTTR+ R + I ++C+ T N F+F
Sbjct: 228 YSHTTTRMWRKTRKPISSACYGTDANRNFDF 258
>AE014134-1892|AAF52956.3| 880|Drosophila melanogaster CG6232-PA
protein.
Length = 880
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -2
Query: 271 NLKKRFIENKFVFDIHNHRSDNNIPKSPKIVIKYLSDKNVNFFKSITLVDDLPT 110
N K+ ++EN+ I N +SD + KS I+ ++ + + FKS+ LP+
Sbjct: 78 NNKEEYLENETTSKISN-KSDEKVLKSSTIISLNATNPSTSTFKSVLETTTLPS 130
>BT021222-1|AAX33370.1| 822|Drosophila melanogaster RH55640p
protein.
Length = 822
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -2
Query: 97 YDFYVKVKRCPTPVRDWH--NYHEQIIDQLDRV 5
Y+ +K R P P+R W+ + ++IID +D+V
Sbjct: 380 YNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKV 412
>AY060822-1|AAL28370.1| 641|Drosophila melanogaster GM01081p
protein.
Length = 641
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -2
Query: 97 YDFYVKVKRCPTPVRDWH--NYHEQIIDQLDRV 5
Y+ +K R P P+R W+ + ++IID +D+V
Sbjct: 199 YNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKV 231
>AE014134-2947|AAF53680.2| 822|Drosophila melanogaster CG10333-PA
protein.
Length = 822
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -2
Query: 97 YDFYVKVKRCPTPVRDWH--NYHEQIIDQLDRV 5
Y+ +K R P P+R W+ + ++IID +D+V
Sbjct: 380 YNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKV 412
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,669,993
Number of Sequences: 53049
Number of extensions: 928530
Number of successful extensions: 2636
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2635
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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