Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11m19
         (815 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364550-3|AAK52059.1|  518|Drosophila melanogaster envelope pro...    30   4.4  
AE013599-2946|AAM68426.1|  137|Drosophila melanogaster CG30129-P...    30   4.4  

>AF364550-3|AAK52059.1|  518|Drosophila melanogaster envelope
           protein protein.
          Length = 518

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 270 NKIMPIIMMIGAVLFLGLILYFIYRY 193
           N +  I + I A++ L LILYFIY+Y
Sbjct: 447 NTLQIITLTILAIIILTLILYFIYKY 472


>AE013599-2946|AAM68426.1|  137|Drosophila melanogaster CG30129-PA
           protein.
          Length = 137

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 660 SYYVQGRNAGENVESCLLLQRTCRQDRNLAQSDVNICSRDPLLANDS 520
           S  V G++A E + +   +Q+ C ++ N+A SD N+ + D  +AN S
Sbjct: 16  SELVAGQSAAE-LAAYKQIQQACIKELNIAASDANLLTTDKEVANPS 61


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,601,110
Number of Sequences: 53049
Number of extensions: 655145
Number of successful extensions: 1685
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1685
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)